PDB Chemical Component 6AK

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 6AK

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CL2 C22 1.713 1.735
C24 C23 1.515 1.507
C23 C22 1.409 1.384
C23 C25 1.407 1.381
C22 C28 1.411 1.384
C29 C28 1.521 1.507
C25 C26 1.392 1.388
C28 C27 1.419 1.381
C26 C27 1.414 1.386
C26 O01 1.355 1.359
O01 C10 1.425 1.430
C10 C09 1.525 1.530
C09 C08 1.530 1.530
C04 C05 1.402 1.364
C04 C03 1.409 1.389
C05 C06 1.415 1.402
C08 C07 1.505 1.507
CL C03 1.721 1.735
C03 C02 1.407 1.388
C06 C07 1.419 1.418
C06 C01 1.412 1.409
C07 C11 1.387 1.348
C01 C02 1.431 1.402
C01 N02 1.375 1.371
C02 C19 1.459 1.484
C11 N02 1.371 1.386
C11 C12 1.451 1.480
O02 C12 1.237 1.216
N02 C14 1.478 1.463
C21 C20 1.490 1.507
C19 C20 1.419 1.409
C19 C17 1.397 1.364
C12 N01 1.420 1.356
C20 N04 1.358 1.307
C17 C18 1.489 1.507
C17 N03 1.359 1.349
C14 C15 1.515 1.533
N01 C13 1.462 1.454
N01 C34 1.422 1.397
N04 N03 1.357 1.401
N03 C16 1.453 1.465
C13 C15 1.519 1.528
C34 C33 1.424 1.379
C34 C35 1.429 1.404
C33 C31 1.369 1.402
C39 C35 1.437 1.462
C39 C38 1.383 1.345
C35 C36 1.407 1.407
C31 C32 1.469 1.474
C31 C30 1.404 1.393
O03 C32 1.221 1.216
C38 N05 1.368 1.366
C32 O04 1.338 1.348
C36 C30 1.426 1.388
C36 N05 1.395 1.378
N05 C37 1.446 1.465
C14 H1 1.100 1.091
C14 H2 1.100 1.090
C10 H3 1.100 1.090
C10 H4 1.099 1.089
C13 H5 1.100 1.090
C13 H6 1.100 1.089
C04 H7 1.080 1.080
C05 H8 1.080 1.081
C08 H9 1.100 1.090
C08 H10 1.100 1.091
C09 H11 1.100 1.091
C09 H12 1.100 1.090
C15 H13 1.100 1.090
C15 H14 1.100 1.090
C16 H15 1.100 1.090
C16 H16 1.100 1.090
C16 H17 1.100 1.090
C18 H18 1.100 1.090
C18 H19 1.100 1.091
C18 H20 1.100 1.090
C21 H21 1.100 1.090
C21 H22 1.100 1.090
C21 H23 1.100 1.090
C24 H24 1.100 1.090
C24 H25 1.100 1.091
C24 H26 1.100 1.090
C25 H27 1.080 1.080
C27 H28 1.080 1.080
C29 H29 1.100 1.091
C29 H30 1.100 1.089
C29 H31 1.100 1.090
C30 H32 1.080 1.080
O04 H33 0.950 0.967
C33 H34 1.080 1.079
C37 H35 1.100 1.091
C37 H36 1.100 1.090
C37 H37 1.100 1.090
C38 H38 1.080 1.080
C39 H39 1.080 1.080

Bond Angles for 6AK

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CL2 C22 C28 117.2 120.0
C24 C23 C25 120.9 120.0
C23 C22 C28 123.6 120.0
C23 C25 C26 120.7 120.0
C23 C25 H27 119.6 120.0
C22 C28 C27 117.1 120.0
C25 C26 C27 120.9 119.9
C26 C25 H27 119.6 120.0
C28 C27 H28 119.9 120.0
C26 C27 H28 119.9 120.0
O01 C10 H3 110.4 109.5
O01 C10 H4 110.4 109.4
C10 C09 C08 110.6 109.4
C09 C10 H3 110.4 109.5
C09 C10 H4 110.4 109.5
C10 C09 H11 109.2 109.5
C10 C09 H12 109.2 109.5
C09 C08 H9 108.9 109.5
C09 C08 H10 108.9 109.4
C04 C05 C06 119.6 120.2
C05 C04 H7 120.3 119.7
C04 C05 H8 120.2 120.0
C05 C06 C07 131.6 133.2
C06 C05 H8 120.2 119.9
C03 C02 C19 119.4 120.2
C06 C01 N02 105.8 107.4
C07 C11 N02 108.3 109.7
C02 C01 N02 132.5 133.3
C01 C02 C19 124.6 120.1
C11 N02 C01 110.7 108.4
C02 C19 C20 134.7 126.2
C02 C19 C17 119.9 126.2
C12 C11 N02 120.2 121.3
C11 C12 N01 115.1 115.5
O02 C12 N01 123.3 122.2
N02 C14 C15 116.9 109.8
N02 C14 H1 107.6 109.4
N02 C14 H2 107.6 109.4
C21 C20 N04 121.8 125.9
C19 C20 N04 110.7 108.1
C12 N01 C13 125.9 119.4
C12 N01 C34 118.1 120.3
C17 C18 H18 109.5 109.4
C17 C18 H19 109.5 109.4
C17 C18 H20 109.5 109.5
C14 C15 C13 106.4 109.8
C15 C14 H1 107.6 109.4
C15 C14 H2 107.6 109.4
C14 C15 H13 110.2 109.4
C14 C15 H14 110.2 109.4
N01 C13 C15 117.3 113.4
N01 C13 H5 107.5 108.7
N01 C13 H6 107.5 108.6
N01 C34 C33 110.5 120.1
N01 C34 C35 130.3 120.1
N03 C16 H15 109.5 109.5
N03 C16 H16 109.5 109.4
N03 C16 H17 109.5 109.5
C15 C13 H5 107.5 108.6
C15 C13 H6 107.5 108.7
C13 C15 H13 110.3 109.4
C13 C15 H14 110.2 109.4
C34 C33 H34 118.7 119.9
C34 C35 C36 117.1 120.2
C39 C38 H38 127.0 125.1
C35 C36 N05 106.9 107.1
C31 C32 O04 110.6 120.0
C31 C30 H32 120.8 120.1
O03 C32 O04 122.9 120.0
C32 O04 H33 109.5 117.0
C36 C30 H32 120.8 120.0
C36 N05 C37 123.2 125.0
N05 C37 H35 109.5 109.5
N05 C37 H36 109.4 109.5
N05 C37 H37 109.5 109.5
H1 C14 H2 109.4 109.4
H3 C10 H4 109.5 109.5
H5 C13 H6 109.5 108.7
H9 C08 H10 109.4 109.5
H11 C09 H12 109.5 109.5
H13 C15 H14 109.4 109.3
H15 C16 H16 109.5 109.5
H15 C16 H17 109.4 109.4
H16 C16 H17 109.5 109.5
H18 C18 H19 109.5 109.5
H18 C18 H20 109.5 109.5
H19 C18 H20 109.5 109.5
H21 C21 H22 109.5 109.5
H21 C21 H23 109.4 109.5
H22 C21 H23 109.5 109.4
H24 C24 H25 109.5 109.5
H24 C24 H26 109.5 109.5
H25 C24 H26 109.4 109.5
H29 C29 H30 109.4 109.5
H29 C29 H31 109.5 109.4
H30 C29 H31 109.5 109.5
H35 C37 H36 109.5 109.4
H35 C37 H37 109.4 109.5
H36 C37 H37 109.5 109.5

Torsion Angles for 6AK

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C23 C22 CL2 C28 179.9 180.3
CL2 C22 C28 C27 179.6 180.2
C24 C23 C22 C28 179.7 180.0
C24 C23 C25 C26 180.4 180.0
C24 C23 C25 H27 0.4 359.9
CL2 C22 C23 C28 180.1 179.7
C23 C22 C28 C27 359.7 360.0
C25 C23 C22 C28 0.4 0.0
C23 C25 C26 C27 0.1 0.0
C26 C25 C23 H27 180.0 180.0
C22 C28 C27 H28 180.2 180.0
C29 C28 C27 H28 0.4 0.3
C23 C25 C26 H27 180.0 180.0
C25 C26 C27 H28 179.9 180.0
C26 C27 C28 H28 180.0 180.1
C22 C28 C27 C26 0.2 0.1
C27 C26 C25 H27 180.1 180.1
C28 C27 C26 H28 180.0 179.9
C26 O01 C10 H3 307.8 60.1
C26 O01 C10 H4 69.0 300.0
C09 C10 O01 H3 240.6 120.0
C09 C10 O01 H4 119.4 240.0
O01 C10 C09 H11 57.1 300.0
O01 C10 C09 H12 176.8 60.0
H3 C10 O01 H4 238.9 120.1
O01 C10 C09 H3 119.4 240.0
O01 C10 C09 H4 240.6 120.0
C10 C09 C08 H9 47.5 60.0
C10 C09 C08 H10 166.8 299.9
H3 C10 C09 H4 121.2 239.9
H11 C09 C10 H12 240.3 240.0
C08 C09 C10 H3 177.5 300.0
C08 C09 C10 H4 56.3 60.1
C10 C09 C08 H11 120.2 119.9
C10 C09 C08 H12 239.9 240.0
H9 C08 C09 H10 240.8 120.1
C04 C05 C06 C07 180.3 179.8
C06 C05 C04 H8 180.0 180.0
C04 C03 C02 C19 179.4 179.9
C06 C05 C04 H7 179.4 180.2
C04 C05 C06 H8 180.0 180.0
C05 C06 C01 N02 180.6 179.9
C10 C09 C08 C07 287.2 180.0
C08 C07 C11 N02 177.3 179.8
CL C03 C02 C19 0.5 359.9
C03 C02 C01 N02 179.2 180.3
C01 C02 C03 C19 180.1 180.0
C03 C02 C19 C20 275.4 270.0
C03 C02 C19 C17 97.2 89.9
C07 C06 C05 H8 0.3 359.8
C07 C06 C01 N02 0.6 359.9
C06 C07 C11 N02 355.2 359.8
C02 C01 C06 N02 179.2 180.1
C06 C01 C02 C19 180.4 180.1
C11 N02 C01 C06 356.3 360.0
C07 C11 N02 C01 5.4 0.1
C12 C11 C07 N02 184.3 180.0
C07 C11 C12 N01 218.7 223.3
C03 C02 C01 C19 179.9 180.0
C06 C01 C02 N02 181.1 179.8
C11 N02 C01 C02 177.3 179.8
C01 C02 C19 C20 95.3 90.0
C01 C02 C19 C17 277.1 269.9
N02 C01 C02 C19 359.3 0.3
C12 C11 N02 C01 181.7 180.2
C01 N02 C14 C15 108.5 108.2
C01 N02 C14 H1 229.6 228.2
C01 N02 C14 H2 347.4 348.1
C19 C02 C01 N02 359.3 0.3
C02 C19 C20 N04 180.9 179.7
C06 C01 N02 C11 356.3 360.0
C02 C01 N02 C11 177.3 179.8
N02 C11 C12 N01 43.4 43.3
C11 N02 C14 C15 284.0 288.5
C11 N02 C14 H1 45.0 48.5
C11 N02 C14 H2 162.9 168.4
C07 C11 C12 N02 175.3 180.0
O02 C12 C11 N01 180.9 180.0
C11 C12 N01 C13 0.0 13.9
C11 C12 N01 C34 182.3 193.9
O02 C12 C11 N02 224.3 223.2
C11 C12 O02 N01 179.1 180.0
O02 C12 N01 C13 179.2 193.9
O02 C12 N01 C34 1.4 14.0
N02 C14 C15 C13 38.9 42.4
C15 C14 N02 H1 238.9 240.0
C15 C14 N02 H2 121.1 120.1
N02 C14 C15 H13 158.5 162.5
N02 C14 C15 H14 279.4 282.3
H1 C14 N02 H2 242.2 240.1
C19 C20 C21 N04 179.4 179.8
C02 C19 C20 C17 181.7 179.9
C21 C20 C19 N04 180.6 180.2
C02 C19 C17 C20 178.6 180.1
C19 C17 C18 H18 90.0 270.0
C19 C17 C18 H19 210.0 29.9
C19 C17 C18 H20 330.0 150.0
N01 C12 C11 N02 43.4 43.3
C12 N01 C13 C15 287.4 274.5
C12 N01 C13 H5 48.6 35.5
C12 N01 C13 H6 166.3 153.6
C12 N01 C34 C33 68.3 90.0
C12 N01 C34 C35 247.9 269.9
C02 C19 C17 C18 359.4 0.1
H18 C18 C17 H19 240.0 240.1
H18 C18 C17 H20 120.0 120.1
H19 C18 C17 H20 240.0 240.0
C02 C19 C17 N03 179.4 180.1
C17 N03 C16 H15 179.6 89.9
C17 N03 C16 H16 299.6 210.0
C17 N03 C16 H17 59.7 329.9
N02 C14 C15 H1 121.1 120.0
N02 C14 C15 H2 238.9 239.9
N01 C13 C15 C14 43.4 44.5
C14 C15 C13 H5 282.3 283.5
C14 C15 C13 H6 164.5 165.4
C13 C15 C14 H13 240.4 239.9
C13 C15 C14 H14 119.5 120.1
H1 C14 C15 H2 117.8 119.9
H13 C15 C14 H14 239.1 240.2
C12 N01 C13 C34 182.2 180.0
C14 C15 C13 N01 43.4 44.5
C15 C13 N01 H5 238.9 239.0
C15 C13 N01 H6 121.1 120.9
N01 C13 C15 H13 283.9 284.3
N01 C13 C15 H14 163.0 164.5
H5 C13 N01 H6 242.3 241.9
C12 N01 C34 C13 178.0 180.0
C34 N01 C13 C15 105.2 94.5
C34 N01 C13 H5 226.4 215.4
C34 N01 C13 H6 344.1 333.5
N01 C34 C33 H34 359.6 360.0
N01 C34 C35 C36 180.2 179.8
N04 N03 C16 H15 360.0 269.7
N04 N03 C16 H16 120.0 29.8
N04 N03 C16 H17 240.0 149.8
H15 C16 N03 H16 240.0 239.9
H15 C16 N03 H17 120.0 120.0
H16 C16 N03 H17 240.0 240.1
C13 C15 C14 H1 277.8 282.4
C13 C15 C14 H2 160.0 162.5
C14 C15 C13 H13 119.6 120.1
C14 C15 C13 H14 240.5 239.9
N01 C13 C15 H5 121.2 121.0
N01 C13 C15 H6 238.9 239.1
H5 C13 C15 H6 117.7 118.1
H13 C15 C13 H14 120.9 119.8
N01 C34 C33 C35 179.6 180.0
N01 C34 C35 C33 180.5 180.0
C35 C34 C33 H34 180.0 180.0
C34 C35 C36 N05 180.1 180.0
N01 C34 C33 C31 179.6 180.0
C33 C31 C30 H32 179.4 180.0
C35 C36 C30 H32 180.4 179.7
C35 C36 N05 C37 180.0 180.0
C32 C31 C30 H32 0.5 0.0
O03 C32 C31 O04 178.5 180.0
C31 C32 O04 H33 178.6 180.0
C36 C30 C31 H32 180.0 180.2
C31 C32 O03 O04 181.6 180.0
O03 C32 O04 H33 0.0 359.9
C38 N05 C37 H35 180.0 270.1
C38 N05 C37 H36 300.0 30.0
C38 N05 C37 H37 60.0 150.1
C31 C30 C36 H32 180.0 179.8
N05 C36 C30 H32 0.4 0.3
C36 N05 C37 H35 0.1 90.0
C36 N05 C37 H36 120.1 209.9
C36 N05 C37 H37 240.1 330.0
H35 C37 N05 H36 240.0 240.1
H35 C37 N05 H37 120.0 120.0
H36 C37 N05 H37 240.0 239.9
N02 C14 H1 C15 233.3 239.7
N02 C14 H1 H2 116.6 119.9
H1 C14 C15 C13 277.8 282.4
C15 C14 H1 H2 243.4 240.1
H1 C14 C15 H13 37.4 42.5
H1 C14 C15 H14 158.3 162.3
N02 C14 H2 C15 126.7 120.3
N02 C14 H2 H1 243.3 240.2
H2 C14 C15 C13 160.0 162.5
C15 C14 H2 H1 116.6 119.8
H2 C14 C15 H13 279.6 282.6
H2 C14 C15 H14 40.5 42.4
O01 C10 H3 H4 121.7 240.0
H3 C10 C09 C08 177.5 300.0
C09 C10 H3 H4 238.3 120.0
H3 C10 C09 H11 297.7 59.9
H3 C10 C09 H12 57.3 180.0
O01 C10 H4 H3 238.3 120.0
H4 C10 C09 C08 56.3 60.1
C09 C10 H4 H3 121.7 240.0
H4 C10 C09 H11 176.5 180.0
H4 C10 C09 H12 296.2 300.0
N01 C13 H5 C15 232.9 236.1
N01 C13 H5 H6 116.4 118.1
C15 C13 H5 H6 243.6 241.9
H5 C13 C15 H13 162.7 163.3
H5 C13 C15 H14 41.8 43.5
N01 C13 H6 C15 127.1 123.8
N01 C13 H6 H5 243.5 241.9
C15 C13 H6 H5 116.4 118.1
H6 C13 C15 H13 45.0 45.2
H6 C13 C15 H14 284.1 285.4
H7 C04 C05 C06 179.4 180.2
H7 C04 C05 H8 359.5 0.2
C04 C05 H8 C06 180.0 180.0
H8 C05 C04 H7 359.5 0.2
H8 C05 C06 C07 0.3 359.8
C09 C08 H9 H10 118.9 240.0
C09 C08 H10 H9 241.1 120.1
C10 C09 H11 C08 239.0 240.1
H11 C09 C10 H3 297.7 59.9
H11 C09 C10 H4 176.5 180.0
C10 C09 H11 H12 119.5 120.0
H11 C09 C08 H9 287.4 300.1
H11 C09 C08 H10 46.6 180.0
C10 C09 H12 C08 121.0 120.0
H12 C09 C10 H3 57.3 180.0
H12 C09 C10 H4 296.2 300.0
C10 C09 H12 H11 240.5 240.0
H12 C09 C08 H9 167.7 180.0
H12 C09 C08 H10 286.9 60.0
C14 C15 H13 C13 242.8 239.7
H13 C15 C14 H1 37.4 42.5
H13 C15 C14 H2 279.6 282.6
C14 C15 H13 H14 121.4 119.8
H13 C15 C13 H5 162.7 163.3
H13 C15 C13 H6 45.0 45.2
C13 C15 H13 H14 238.6 240.2
C14 C15 H14 C13 117.2 120.3
H14 C15 C14 H1 158.3 162.3
H14 C15 C14 H2 40.5 42.4
C14 C15 H14 H13 238.6 240.1
H14 C15 C13 H5 41.8 43.5
H14 C15 C13 H6 284.1 285.4
C13 C15 H14 H13 121.4 119.8
N03 C16 H15 H16 120.0 120.0
N03 C16 H15 H17 240.0 240.0
H16 C16 H15 H17 120.0 120.0
N03 C16 H16 H15 240.0 239.9
N03 C16 H16 H17 120.0 119.9
H15 C16 H16 H17 240.0 240.0
N03 C16 H17 H15 120.0 120.0
N03 C16 H17 H16 240.0 240.1
H15 C16 H17 H16 120.0 120.0
C17 C18 H18 H19 120.0 119.9
C17 C18 H18 H20 240.0 240.0
H19 C18 H18 H20 120.0 120.0
C17 C18 H19 H18 240.0 240.1
C17 C18 H19 H20 120.0 120.0
H18 C18 H19 H20 240.0 239.9
C17 C18 H20 H18 120.0 120.0
C17 C18 H20 H19 240.0 240.0
H18 C18 H20 H19 120.0 120.0
H21 C21 C20 N04 360.0 270.3
H22 C21 H21 H23 120.0 120.0
H22 C21 C20 N04 120.0 30.3
H21 C21 H22 H23 240.0 240.0
H23 C21 C20 N04 240.0 150.2
H21 C21 H23 H22 120.0 120.0
H24 C24 C23 C25 269.7 270.1
H25 C24 H24 H26 120.0 120.0
H25 C24 C23 C25 29.7 30.0
H24 C24 H25 H26 240.0 240.0
H26 C24 C23 C25 149.7 150.0
H24 C24 H26 H25 120.0 120.0
C23 C25 H27 C26 180.0 180.0
H27 C25 C26 C27 180.1 180.1
H30 C29 H29 H31 120.0 120.0
H29 C29 H30 H31 240.0 240.0
H29 C29 H31 H30 120.0 120.0
N05 C37 H35 H36 120.0 119.9
N05 C37 H35 H37 240.0 240.0
H36 C37 H35 H37 120.0 120.0
N05 C37 H36 H35 240.0 240.1
N05 C37 H36 H37 120.0 120.1
H35 C37 H36 H37 240.0 240.0
N05 C37 H37 H35 120.0 120.0
N05 C37 H37 H36 240.0 240.0
H35 C37 H37 H36 120.0 119.9
H39 C39 C38 H38 0.1 360.0