PDB Chemical Component 688

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 688

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.431	1.397
C1	C6	1.398	1.388
C1	H1	1.103	1.080
C2	C3	1.416	1.398
C2	C7	1.374	1.481
C3	C4	1.426	1.387
C3	H3	1.102	1.080
C4	N5	1.338	1.322
C4	O1	1.356	1.356
N5	C6	1.357	1.322
C6	O2	1.365	1.357
O1	C21	1.353	1.360
O2	C11	1.378	1.360
C7	O3	1.220	1.214
C7	O4	1.339	1.346
O4	HO4	0.950	0.968
C11	C12	1.408	1.382
C11	C16	1.396	1.394
C12	C13	1.391	1.396
C12	H12	1.103	1.080
C13	C14	1.428	1.395
C13	C17	1.425	1.479
C14	C15	1.416	1.378
C14	H14	1.103	1.080
C15	C16	1.420	1.387
C15	H15	1.103	1.079
C16	O11	1.369	1.359
C17	N11	1.311	1.304
C17	N12	1.331	1.379
N11	HN11	1.019	0.969
N12	H121	1.021	0.970
N12	H122	1.020	0.970
O11	HO11	0.949	0.967
C21	C22	1.410	1.388
C21	C26	1.416	1.384
C22	C23	1.412	1.383
C22	H22	1.103	1.080
C23	C24	1.403	1.380
C23	H23	1.102	1.080
C24	C25	1.402	1.396
C24	H24	1.102	1.079
C25	C26	1.417	1.394
C25	C27	1.412	1.479
C26	H26	1.103	1.079
C27	N21	1.333	1.364
C27	N22	1.356	1.315
N21	C29	1.411	1.368
N21	HN21	1.019	0.970
N22	C28	1.417	1.338
C28	C29	1.542	1.348
C28	H28	1.104	1.080
C29	H29	1.103	1.080

Bond Angles for 688

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	119.3	119.1
C2	C1	H1	121.5	120.5
C1	C2	C3	116.4	118.2
C1	C2	C7	119.7	120.8
C6	C1	H1	119.2	120.4
C1	C6	N5	121.7	120.8
C1	C6	O2	121.5	119.6
C3	C2	C7	121.1	120.9
C2	C3	C4	118.0	119.1
C2	C3	H3	120.6	120.4
C2	C7	O3	122.3	120.0
C2	C7	O4	119.6	120.0
C4	C3	H3	121.3	120.5
C3	C4	N5	123.2	120.8
C3	C4	O1	119.7	119.5
N5	C4	O1	116.9	119.6
C4	N5	C6	118.5	122.0
C4	O1	C21	129.9	106.8
N5	C6	O2	115.2	119.7
C6	O2	C11	120.5	106.8
O1	C21	C22	117.4	119.9
O1	C21	C26	120.2	120.0
O2	C11	C12	111.4	120.0
O2	C11	C16	129.0	120.0
O3	C7	O4	118.1	120.0
C7	O4	HO4	119.6	120.0
C12	C11	C16	119.6	120.0
C11	C12	C13	121.6	119.8
C11	C12	H12	119.8	120.1
C11	C16	C15	120.1	120.1
C11	C16	O11	122.9	119.9
C13	C12	H12	118.6	120.1
C12	C13	C14	119.2	119.9
C12	C13	C17	119.8	120.0
C14	C13	C17	121.0	120.1
C13	C14	C15	119.5	120.1
C13	C14	H14	120.6	120.0
C13	C17	N11	126.0	120.0
C13	C17	N12	121.7	120.0
C15	C14	H14	119.9	120.0
C14	C15	C16	119.9	120.1
C14	C15	H15	119.8	119.9
C16	C15	H15	120.2	120.0
C15	C16	O11	117.0	119.9
C16	O11	HO11	122.8	106.8
N11	C17	N12	112.3	120.0
C17	N11	HN11	59.7	119.9
C17	N12	H121	121.7	120.0
C17	N12	H122	107.8	120.0
H121	N12	H122	107.9	120.0
C22	C21	C26	122.4	120.1
C21	C22	C23	119.4	120.2
C21	C22	H22	120.1	119.9
C21	C26	C25	117.6	119.8
C21	C26	H26	121.1	120.1
C23	C22	H22	120.4	119.9
C22	C23	C24	118.0	120.2
C22	C23	H23	121.3	119.8
C24	C23	H23	120.7	119.9
C23	C24	C25	122.9	119.9
C23	C24	H24	118.6	120.0
C25	C24	H24	118.5	120.0
C24	C25	C26	119.5	119.8
C24	C25	C27	125.4	120.0
C26	C25	C27	115.1	120.2
C25	C26	H26	121.3	120.1
C25	C27	N21	128.1	125.9
C25	C27	N22	121.0	125.8
N21	C27	N22	108.5	108.3
C27	N21	C29	112.3	107.0
C27	N21	HN21	121.4	126.4
C27	N22	C28	111.2	109.2
C29	N21	HN21	126.3	126.5
N21	C29	C28	101.8	107.0
N21	C29	H29	126.0	126.5
N22	C28	C29	103.3	108.4
N22	C28	H28	125.3	125.8
C29	C28	H28	131.4	125.8
C28	C29	H29	132.2	126.5

Torsion Angles for 688

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C1	C2	H1	180.0	180.0
C2	C1	C6	N5	16.6	0.3
C2	C1	C6	O2	181.0	180.0
C3	C2	C1	C7	161.4	180.0
C1	C2	C3	C4	14.2	0.1
C1	C2	C3	H3	194.1	180.0
C1	C2	C7	O3	165.1	360.0
C1	C2	C7	O4	345.8	179.9
C2	C1	C6	H1	180.0	180.0
C6	C1	C2	C3	342.5	360.0
C6	C1	C2	C7	181.0	180.0
C4	N5	C6	C1	348.6	359.4
N5	C6	C1	O2	195.6	180.3
C1	C6	O2	C11	206.9	96.0
C2	C1	H1	C6	180.0	180.0
H1	C1	C2	C3	162.5	180.0
H1	C1	C2	C7	1.0	360.0
H1	C1	C6	N5	196.5	180.3
H1	C1	C6	O2	1.0	360.0
C3	C2	C1	C6	342.5	360.0
C3	C2	C1	H1	162.5	180.0
C1	C2	C3	C7	198.8	180.0
C3	C2	C7	O3	4.6	180.0
C3	C2	C7	O4	185.3	359.9
C4	C3	C2	H3	180.1	180.1
C2	C3	C4	N5	350.0	359.6
C2	C3	C4	O1	165.0	180.0
C7	C2	C1	C6	181.0	180.0
C7	C2	C1	H1	1.0	360.0
C1	C2	C7	C3	160.5	180.0
C7	C2	C3	C4	175.3	180.1
C7	C2	C3	H3	355.3	359.9
O3	C7	C2	O4	179.3	180.1
C2	C7	O4	HO4	180.1	180.0
C4	C3	C2	C7	175.3	180.1
C2	C3	C4	H3	179.9	179.9
N5	C4	C3	O1	185.0	179.6
C3	C4	N5	C6	8.2	0.7
C3	C4	O1	C21	20.7	93.0
H3	C3	C2	C7	355.3	359.9
C2	C3	H3	C4	180.1	180.1
H3	C3	C4	N5	170.1	179.7
H3	C3	C4	O1	345.0	0.1
C1	C6	N5	C4	348.6	359.4
N5	C4	C3	H3	170.1	179.7
C3	C4	N5	O1	175.1	180.4
N5	C4	O1	C21	196.0	273.4
C4	N5	C6	O2	183.2	179.7
O1	C4	C3	H3	345.0	0.1
C3	C4	O1	N5	184.7	179.6
O1	C4	N5	C6	193.1	180.3
C4	O1	C21	C22	33.3	5.4
C4	O1	C21	C26	216.0	185.1
N5	C6	C1	H1	196.5	180.3
C1	C6	N5	O2	165.3	179.7
C6	N5	C4	O1	193.1	180.3
N5	C6	O2	C11	12.3	275.6
O2	C6	C1	H1	1.0	360.0
C1	C6	O2	N5	194.6	180.3
C6	O2	C11	C12	245.1	354.4
C6	O2	C11	C16	66.2	174.2
C22	C21	O1	C26	177.3	180.2
O1	C21	C22	C23	179.1	180.0
O1	C21	C22	H22	359.1	0.0
O1	C21	C26	C25	180.5	179.7
O1	C21	C26	H26	0.5	0.2
C12	C11	O2	C16	178.9	180.2
O2	C11	C12	C13	182.3	180.2
O2	C11	C12	H12	2.3	359.9
O2	C11	C16	C15	178.6	180.0
O2	C11	C16	O11	356.4	0.1
C2	C7	O3	O4	180.7	179.9
O3	C7	O4	HO4	0.8	359.9
C2	C7	O4	O3	179.3	180.1
O2	C11	C12	C16	181.0	179.8
C12	C11	C16	C15	359.8	359.7
C12	C11	C16	O11	177.5	179.8
C13	C12	C11	H12	180.0	180.3
C11	C12	C13	C14	358.9	359.6
C11	C12	C13	C17	180.3	179.8
O2	C11	C16	C12	178.8	180.2
C16	C11	C12	C13	1.3	0.5
C16	C11	C12	H12	181.3	180.1
C14	C15	C16	C11	359.1	0.0
C11	C16	C15	H15	179.1	180.0
C15	C16	C11	O11	182.2	179.9
C11	C16	O11	HO11	180.0	269.9
C13	C12	C11	C16	1.3	0.5
C11	C12	C13	H12	180.0	179.7
C14	C13	C12	C17	178.5	179.8
C12	C13	C14	C15	360.0	0.2
C12	C13	C14	H14	180.0	180.2
C12	C13	C17	N11	353.7	5.5
C12	C13	C17	N12	173.6	185.5
H12	C12	C11	C16	181.3	180.1
C11	C12	H12	C13	180.0	180.3
H12	C12	C13	C14	178.8	179.9
H12	C12	C13	C17	0.3	0.1
C14	C13	C12	H12	178.8	179.9
C12	C13	C14	C17	181.5	180.2
C14	C13	C17	N11	175.2	185.7
C14	C13	C17	N12	355.1	5.7
C15	C14	C13	H14	180.0	180.0
C13	C14	C15	C16	1.0	360.0
C13	C14	C15	H15	181.0	180.0
C17	C13	C12	H12	0.3	0.1
C12	C13	C17	C14	178.5	179.8
C17	C13	C14	C15	178.5	180.0
C17	C13	C14	H14	358.5	360.0
N11	C17	C13	N12	180.1	180.0
C13	C17	N11	HN11	327.1	5.4
C13	C17	N12	H121	180.0	174.9
C13	C17	N12	H122	54.7	354.6
C11	C16	C15	C14	359.1	0.0
C15	C14	C13	C17	178.5	180.0
C13	C14	C15	H14	180.0	180.0
C16	C15	C14	H15	180.0	180.0
C14	C15	C16	O11	181.2	180.0
H14	C14	C13	C17	358.5	360.0
C13	C14	H14	C15	180.0	180.0
H14	C14	C15	C16	181.0	180.0
H14	C14	C15	H15	1.0	0.0
C11	C16	C15	O11	177.9	180.1
C16	C15	C14	H14	181.0	180.0
C14	C15	C16	H15	180.0	180.0
C15	C16	O11	HO11	357.8	90.0
H15	C15	C14	H14	1.0	0.0
C14	C15	H15	C16	180.0	180.0
H15	C15	C16	O11	1.2	360.0
C11	C16	O11	C15	182.2	179.9
O11	C16	C15	H15	1.2	360.0
C13	C17	N11	N12	180.0	180.0
N11	C17	N12	H121	360.0	354.9
N11	C17	N12	H122	234.7	174.6
C13	C17	N12	N11	180.0	180.0
N12	C17	N11	HN11	147.2	185.4
H121	N12	C17	H122	125.3	180.3
HN11	N11	C17	N12	147.2	185.4
C17	N12	H121	H122	234.7	179.7
C17	N12	H122	H121	133.1	180.3
O1	C21	C22	C26	182.8	179.8
C22	C21	C26	C25	3.3	359.5
C22	C21	C26	H26	183.3	180.0
C23	C22	C21	H22	180.0	180.0
C21	C22	C23	C24	2.3	0.0
C21	C22	C23	H23	182.3	180.0
O1	C21	C26	C22	177.2	180.2
C26	C21	C22	C23	356.3	0.2
C26	C21	C22	H22	176.3	180.2
C24	C25	C26	C21	358.4	0.6
C21	C26	C25	C27	178.5	180.2
C25	C26	C21	H26	180.0	179.4
C23	C22	C21	C26	356.3	0.2
C21	C22	C23	H22	180.0	180.0
C24	C23	C22	H23	180.0	180.1
C22	C23	C24	C25	359.3	0.0
C22	C23	C24	H24	179.2	180.0
H22	C22	C21	C26	176.3	180.2
C21	C22	H22	C23	180.0	180.0
H22	C22	C23	C24	182.3	180.1
H22	C22	C23	H23	2.3	360.0
C24	C23	C22	H22	182.3	180.1
C22	C23	C24	H23	180.0	179.9
C25	C24	C23	H24	180.0	180.0
C23	C24	C25	C26	0.4	359.7
C23	C24	C25	C27	180.3	180.0
H23	C23	C22	H22	2.3	360.0
C22	C23	H23	C24	180.0	180.1
H23	C23	C24	C25	179.2	180.1
H23	C23	C24	H24	359.2	0.1
C21	C26	C25	C24	358.4	0.6
C25	C24	C23	H23	179.2	180.1
C23	C24	C25	H24	180.0	180.0
C26	C25	C24	C27	180.1	179.6
C24	C25	C26	H26	178.4	180.0
C24	C25	C27	N21	354.0	5.4
C24	C25	C27	N22	154.5	185.2
H24	C24	C23	H23	359.2	0.1
C23	C24	H24	C25	180.0	180.0
H24	C24	C25	C26	180.4	179.7
H24	C24	C25	C27	0.3	0.1
C21	C26	C25	H26	180.0	180.6
C26	C25	C24	H24	180.4	179.7
C24	C25	C26	C27	179.9	180.4
C26	C25	C27	N21	173.9	185.7
C26	C25	C27	N22	334.4	5.5
C27	C25	C24	H24	0.3	0.1
C24	C25	C27	C26	180.1	179.6
C27	C25	C26	H26	358.5	359.6
N21	C27	C25	N22	199.5	180.2
C25	C27	N21	C29	176.6	180.0
C25	C27	N21	HN21	356.6	0.1
C25	C27	N22	C28	192.1	179.8
C21	C26	H26	C25	180.0	179.4
H26	C26	C25	C27	358.5	359.6
C25	C27	N21	N22	162.4	179.8
N21	C27	N22	C28	356.0	359.6
C29	N21	C27	HN21	180.0	179.9
C27	N21	C29	C28	342.8	0.1
C27	N21	C29	H29	162.8	180.0
C25	C27	N22	N21	196.1	180.2
N22	C27	N21	C29	14.1	0.2
N22	C27	N21	HN21	194.2	180.3
C27	N22	C28	C29	353.6	0.5
C27	N22	C28	H28	173.7	180.2
C29	N21	C27	N22	14.1	0.2
C27	N21	C29	HN21	180.0	180.1
N22	C28	C29	N21	13.5	359.7
N21	C29	C28	H28	193.5	180.0
C28	C29	N21	H29	180.0	180.1
HN21	N21	C27	N22	194.2	180.3
C27	N21	HN21	C29	180.0	179.9
HN21	N21	C29	C28	162.8	180.0
HN21	N21	C29	H29	342.8	359.9
N21	C29	C28	N22	13.5	359.7
C29	C28	N22	H28	180.0	180.3
N22	C28	C29	H29	193.5	179.8
C28	C29	N21	HN21	162.8	180.0
N21	C29	C28	H29	180.0	179.9
N22	C28	C29	H28	180.0	179.7
N22	C28	H28	C29	180.0	180.3
H28	C28	C29	H29	13.5	0.1
H29	C29	N21	HN21	342.8	359.9
N21	C29	H29	C28	180.0	180.1
H29	C29	C28	H28	13.5	0.1