PDB Chemical Component 65C

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 65C

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N7 C15 1.330 1.320
N7 C6 1.342 1.327
N3 C6 1.351 1.383
N3 C7 1.431 1.465
C15 C4 1.381 1.398
C6 N2 1.334 1.324
C7 C8 1.526 1.530
C4 C3 1.471 1.477
C4 C5 1.376 1.410
C8 N4 1.444 1.465
N2 C5 1.350 1.331
N1 C3 1.335 1.315
N1 C1 1.342 1.339
C3 N 1.392 1.365
C5 C16 1.490 1.481
C1 C 1.503 1.506
C1 C2 1.413 1.348
N C2 1.354 1.370
N4 C9 1.366 1.386
C16 C21 1.395 1.395
C16 C17 1.379 1.396
C21 C20 1.396 1.380
C9 C13 1.397 1.393
C9 N5 1.344 1.327
C13 C12 1.404 1.370
CL C17 1.791 1.736
N5 C10 1.339 1.317
C17 C18 1.377 1.380
C20 C19 1.381 1.385
C12 C11 1.396 1.403
C10 C11 1.375 1.396
C18 C19 1.379 1.385
C19 CL1 1.779 1.736
C11 C14 1.294 1.432
C14 N6 1.168 1.136
C2 H1 1.080 1.080
C10 H2 1.080 1.080
C12 H3 1.080 1.080
C13 H4 1.080 1.080
C21 H5 1.080 1.079
C18 H6 1.080 1.080
C20 H7 1.080 1.080
C15 H8 1.080 1.081
N H9 1.000 0.970
C H11 1.100 1.091
C H12 1.100 1.090
C H13 1.100 1.090
N3 H14 1.000 0.970
C7 H15 1.100 1.090
C7 H16 1.100 1.090
C8 H17 1.100 1.090
C8 H18 1.100 1.090
N4 H19 1.000 0.970

Bond Angles for 65C

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N7 C15 H8 120.1 120.5
N7 C6 N2 120.0 122.0
N3 C7 C8 103.2 109.4
C7 N3 H14 106.0 120.0
N3 C7 H15 111.0 109.5
N3 C7 H16 111.0 109.5
C7 C8 N4 111.5 109.4
C8 C7 H15 111.0 109.5
C8 C7 H16 111.0 109.5
C7 C8 H17 108.9 109.5
C7 C8 H18 108.9 109.5
C4 C3 N 130.9 125.8
C4 C5 C16 125.9 120.6
N4 C8 H17 109.0 109.5
N4 C8 H18 108.9 109.5
C8 N4 H19 105.2 120.0
N1 C1 C 129.8 125.8
C3 N H9 128.0 126.5
C5 C16 C21 120.2 120.1
C5 C16 C17 120.4 120.1
C1 C H11 109.5 109.5
C1 C H12 109.5 109.5
C1 C H13 109.5 109.5
C1 C2 H1 127.4 126.5
N C2 H1 127.4 126.4
N4 C9 N5 115.9 119.5
C16 C21 H5 119.5 120.1
C21 C20 C19 118.6 120.1
C20 C21 H5 119.5 120.0
C21 C20 H7 120.7 119.9
C13 C9 N5 118.1 120.9
C9 C13 C12 119.2 119.4
C9 C13 H4 120.4 120.3
C9 N5 C10 123.4 121.6
C13 C12 H3 119.7 120.7
N5 C10 H2 119.3 119.7
C17 C18 H6 119.5 120.0
C12 C11 C14 124.5 120.5
C10 C11 C14 118.2 120.5
C11 C10 H2 119.3 119.8
C11 C14 N6 178.7 179.9
H11 C H12 109.5 109.4
H11 C H13 109.4 109.4
H12 C H13 109.5 109.5
H15 C7 H16 109.5 109.4
H17 C8 H18 109.5 109.4

Torsion Angles for 65C

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C15 N7 C6 N2 359.8 0.3
N3 C7 C8 N4 165.0 180.0
C8 C7 N3 H15 241.0 240.0
C8 C7 N3 H16 119.0 120.0
N3 C7 C8 H17 285.3 300.0
N3 C7 C8 H18 44.7 60.0
H15 C7 N3 H16 238.0 240.0
C15 C4 C3 N 135.2 5.1
C8 C7 N3 H14 150.8 0.0
N3 C7 C8 H15 119.0 120.0
N3 C7 C8 H16 241.0 240.0
N4 C8 C7 H17 239.7 240.0
N4 C8 C7 H18 120.3 120.0
C7 C8 N4 H19 43.9 360.0
H15 C7 C8 H16 122.0 120.0
H17 C8 C7 H18 240.6 240.0
C4 C3 N H9 0.5 0.1
C5 C4 C3 N 318.8 185.3
C4 C5 C16 C21 120.5 85.2
C4 C5 C16 C17 297.0 265.2
N4 C8 C7 H15 46.0 60.0
N4 C8 C7 H16 284.0 300.0
C7 C8 N4 H17 120.3 120.0
C7 C8 N4 H18 239.7 240.0
C8 N4 C9 N5 164.9 180.2
H17 C8 N4 H18 119.4 120.0
N1 C3 N H9 179.7 179.9
N1 C1 C H11 360.0 90.0
N1 C1 C H12 120.0 210.0
N1 C1 C H13 240.0 330.0
N1 C1 C2 H1 179.7 180.0
C3 N C2 H1 180.3 180.0
C5 C16 C21 H5 357.0 0.2
C C1 C2 H1 0.0 0.2
H11 C C1 H12 240.0 240.0
H11 C C1 H13 120.0 120.0
H12 C C1 H13 240.0 240.0
N C2 C1 H1 180.0 179.7
C1 C2 N H1 180.0 180.3
C13 C9 N4 N5 183.6 179.7
N4 C9 C13 H4 357.6 0.2
N4 C9 N5 C10 182.6 179.7
C5 C16 C21 C17 176.6 180.0
C20 C21 C16 H5 180.0 179.7
C16 C21 C20 H7 180.1 180.2
C5 C16 C17 C21 183.4 180.0
C17 C16 C21 H5 180.4 180.3
C16 C17 C18 H6 182.1 180.3
C5 C16 C21 C20 177.0 180.0
C16 C21 C20 H5 180.0 180.3
N4 C9 C13 N5 176.3 180.3
C13 C9 N5 C10 359.3 0.0
C9 C13 C12 H3 178.8 180.0
N5 C9 C13 C12 1.2 360.0
N5 C9 C13 H4 181.2 180.0
C9 N5 C10 H2 180.2 180.0
C12 C13 C9 N5 1.2 360.0
C9 C13 C12 H4 180.0 180.0
C13 C12 C11 C14 179.0 180.0
C5 C16 C17 CL 3.5 0.3
CL C17 C18 H6 0.6 359.5
C11 C10 N5 H2 180.0 180.0
C5 C16 C17 C18 182.0 179.5
C19 C20 C21 H5 180.1 180.0
C21 C20 C19 H7 180.0 180.0
C9 C13 C12 C11 358.7 360.0
C10 C11 C12 C14 181.7 180.0
C12 C11 C10 H2 179.8 180.0
C12 C11 C14 N6 207.3 124.0
C9 N5 C10 C11 0.2 0.0
N5 C10 C11 H2 180.0 180.0
C12 C11 C10 C14 178.4 180.0
C10 C11 C14 N6 25.6 304.0
C21 C20 C19 C18 0.4 360.0
C21 C20 C19 CL1 180.5 180.0
C14 C11 C10 H2 1.4 0.0
H2 C10 C11 C14 1.4 0.0
H3 C12 C11 C14 359.0 0.0
H4 C13 C9 N5 181.2 180.0
C9 C13 H4 C12 180.0 180.0
H4 C13 C12 H3 358.8 0.0
H5 C21 C20 C19 180.1 180.0
H5 C21 C20 H7 0.1 360.0
C21 C20 H7 C19 180.0 180.0
H7 C20 C21 H5 0.1 360.0
H9 N C2 H1 0.3 359.9
C1 C H11 H12 120.0 120.1
C1 C H11 H13 240.0 240.0
H12 C H11 H13 120.0 119.9
C1 C H12 H11 240.0 240.0
C1 C H12 H13 120.0 120.1
H11 C H12 H13 240.0 240.1
C1 C H13 H11 120.0 120.0
C1 C H13 H12 240.0 239.9
H11 C H13 H12 120.0 119.9
H14 N3 C7 C8 150.8 0.0
H14 N3 C7 H15 269.8 120.0
H14 N3 C7 H16 31.8 240.0
N3 C7 H15 C8 245.8 240.0
H15 C7 N3 H14 269.8 120.0
N3 C7 H15 H16 122.9 120.0
H15 C7 C8 N4 46.0 60.0
C8 C7 H15 H16 237.1 240.0
H15 C7 C8 H17 166.3 180.0
H15 C7 C8 H18 285.7 300.0
N3 C7 H16 C8 114.2 120.0
H16 C7 N3 H14 31.8 240.0
N3 C7 H16 H15 237.1 240.0
H16 C7 C8 N4 284.0 300.0
C8 C7 H16 H15 122.9 120.0
H16 C7 C8 H17 44.3 60.0
H16 C7 C8 H18 163.7 180.0
C7 C8 H17 N4 238.1 240.0
H17 C8 C7 H15 166.3 180.0
H17 C8 C7 H16 44.3 60.0
C7 C8 H17 H18 119.1 120.0
N4 C8 H17 H18 240.9 240.0
H17 C8 N4 H19 283.7 240.0
C7 C8 H18 N4 121.9 120.0
H18 C8 C7 H15 285.7 300.0
H18 C8 C7 H16 163.7 180.0
C7 C8 H18 H17 241.0 240.0
N4 C8 H18 H17 119.1 120.0
H18 C8 N4 H19 164.2 120.0
H19 N4 C8 H17 283.7 240.0
H19 N4 C8 H18 164.2 120.0
H19 N4 C9 N5 42.7 0.3