PDB Chemical Component 645

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 645

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 C1 1.238 1.354
O1 HO1 0.950 0.968
C1 C2 1.223 1.391
C1 N2 1.421 1.345
C2 C3 1.410 1.466
C2 C11 1.500 1.468
C3 O2 1.586 1.217
C3 C4 1.218 1.478
C4 C5 1.499 1.398
C4 C9 1.448 1.395
C5 CL1 1.487 1.736
C5 C6 1.402 1.381
C6 C7 1.460 1.382
C6 H6 1.080 1.080
C7 C8 1.402 1.384
C7 S1 1.629 1.762
C8 C9 1.396 1.379
C8 H8 1.080 1.080
C9 H9 1.080 1.080
S1 O3 1.339 1.421
S1 O4 1.402 1.420
S1 C10 1.513 1.814
C10 H101 1.100 1.090
C10 H102 1.100 1.090
C10 H103 1.100 1.090
C11 N1 1.401 1.313
C11 C16 1.372 1.481
N1 N2 1.380 1.397
N2 C12 1.435 1.464
C12 C13 1.604 1.530
C12 C14 1.539 1.529
C12 C15 1.485 1.530
C13 H131 1.100 1.090
C13 H132 1.100 1.090
C13 H133 1.100 1.089
C14 H141 1.100 1.090
C14 H142 1.100 1.089
C14 H143 1.100 1.091
C15 H151 1.100 1.089
C15 H152 1.100 1.090
C15 H153 1.100 1.090
C16 C17 1.525 1.395
C16 C21 1.242 1.394
C17 CL2 1.486 1.736
C17 C18 1.522 1.381
C18 C19 1.396 1.383
C18 H18 1.080 1.081
C19 CL3 1.255 1.736
C19 C20 1.487 1.384
C20 C21 1.331 1.380
C20 H20 1.081 1.080
C21 H21 1.080 1.080

Bond Angles for 645

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1 O1 HO1 109.5 106.8
O1 C1 C2 130.3 126.2
O1 C1 N2 117.2 126.2
C2 C1 N2 112.4 107.7
C1 C2 C3 137.5 127.0
C1 C2 C11 106.1 106.2
C1 N2 N1 109.5 109.7
C1 N2 C12 129.0 125.2
C3 C2 C11 116.4 126.9
C2 C3 O2 107.1 120.0
C2 C3 C4 122.5 120.0
C2 C11 N1 108.4 107.1
C2 C11 C16 142.5 126.5
O2 C3 C4 128.2 120.0
C3 C4 C5 115.7 120.1
C3 C4 C9 129.0 120.2
C5 C4 C9 115.2 119.6
C4 C5 CL1 122.3 120.1
C4 C5 C6 118.6 119.9
C4 C9 C8 124.0 119.9
C4 C9 H9 118.0 120.0
CL1 C5 C6 119.0 120.1
C5 C6 C7 124.0 120.1
C5 C6 H6 118.0 119.9
C7 C6 H6 118.0 120.0
C6 C7 C8 116.7 120.4
C6 C7 S1 125.5 119.8
C8 C7 S1 117.3 119.8
C7 C8 C9 121.4 120.2
C7 C8 H8 119.3 119.9
C7 S1 O3 113.5 102.8
C7 S1 O4 111.9 102.8
C7 S1 C10 104.5 103.2
C9 C8 H8 119.3 119.9
C8 C9 H9 118.0 120.1
O3 S1 O4 86.8 122.1
O3 S1 C10 129.6 111.6
O4 S1 C10 108.9 111.6
S1 C10 H101 109.4 109.4
S1 C10 H102 109.5 109.5
S1 C10 H103 109.5 109.5
H101 C10 H102 109.5 109.4
H101 C10 H103 109.5 109.5
H102 C10 H103 109.5 109.5
N1 C11 C16 109.0 126.4
C11 N1 N2 103.6 109.4
C11 C16 C17 111.1 120.1
C11 C16 C21 129.0 120.2
N1 N2 C12 121.5 125.1
N2 C12 C13 98.3 109.5
N2 C12 C14 122.3 109.5
N2 C12 C15 112.1 109.5
C13 C12 C14 102.2 109.4
C13 C12 C15 106.4 109.4
C12 C13 H131 109.4 109.5
C12 C13 H132 109.5 109.5
C12 C13 H133 109.5 109.5
C14 C12 C15 112.7 109.5
C12 C14 H141 109.5 109.5
C12 C14 H142 109.4 109.6
C12 C14 H143 109.5 109.4
C12 C15 H151 109.5 109.5
C12 C15 H152 109.5 109.4
C12 C15 H153 109.5 109.5
H131 C13 H132 109.5 109.5
H131 C13 H133 109.5 109.5
H132 C13 H133 109.5 109.5
H141 C14 H142 109.5 109.5
H141 C14 H143 109.5 109.5
H142 C14 H143 109.5 109.4
H151 C15 H152 109.5 109.5
H151 C15 H153 109.4 109.5
H152 C15 H153 109.4 109.5
C17 C16 C21 119.9 119.7
C16 C17 CL2 120.9 120.0
C16 C17 C18 110.4 119.8
C16 C21 C20 132.5 119.9
C16 C21 H21 113.8 120.0
CL2 C17 C18 128.8 120.1
C17 C18 C19 124.5 120.2
C17 C18 H18 117.7 119.9
C19 C18 H18 117.7 119.9
C18 C19 CL3 117.4 119.9
C18 C19 C20 116.4 120.2
CL3 C19 C20 126.1 119.9
C19 C20 C21 116.2 120.1
C19 C20 H20 121.9 120.0
C21 C20 H20 121.9 119.9
C20 C21 H21 113.7 120.1

Torsion Angles for 645

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 N2 178.1 180.4
O1 C1 C2 C3 358.3 359.8
O1 C1 C2 C11 180.2 180.1
O1 C1 N2 N1 179.3 180.0
O1 C1 N2 C12 359.2 0.1
HO1 O1 C1 C2 318.8 84.7
HO1 O1 C1 N2 140.7 264.3
C2 C1 O1 HO1 318.8 84.7
O1 C1 C2 N2 181.8 179.7
C2 C1 N2 N1 0.9 359.6
C2 C1 N2 C12 180.8 179.8
C3 C2 C1 C11 178.1 179.7
C1 C2 C3 O2 2.8 274.4
C1 C2 C3 C4 198.4 94.4
C1 C2 C11 N1 2.0 359.7
C1 C2 C11 C16 185.4 179.8
N2 C1 O1 HO1 140.7 264.3
O1 C1 N2 C2 178.4 180.3
N2 C1 C2 C3 176.5 180.1
N2 C1 C2 C11 358.3 0.4
C11 N1 N2 C1 0.5 0.2
N1 N2 C1 C12 180.0 179.8
C1 N2 C12 C13 255.7 179.8
C1 N2 C12 C14 5.8 59.8
C1 N2 C12 C15 144.2 299.8
C3 C2 C1 N2 176.5 180.1
C1 C2 C3 C11 182.0 180.4
C3 C2 C11 N1 183.4 180.0
C3 C2 C11 C16 6.9 0.1
O2 C3 C2 C4 164.4 180.0
C2 C3 C4 C5 251.0 183.7
C2 C3 C4 C9 72.9 3.9
C11 C2 C1 N2 358.3 0.4
C1 C2 C11 C3 178.6 179.7
C11 C2 C3 O2 180.8 94.0
C11 C2 C3 C4 16.4 274.0
N1 C11 C2 C16 176.5 179.9
C2 C11 N1 N2 358.6 0.1
C2 C11 C16 C17 246.4 295.7
C2 C11 C16 C21 67.0 116.0
O2 C3 C2 C11 180.8 94.0
C2 C3 O2 C4 196.7 180.0
O2 C3 C4 C5 90.0 3.7
O2 C3 C4 C9 272.0 183.9
C4 C3 C2 C11 16.4 274.0
C2 C3 C4 O2 160.9 180.0
C5 C4 C3 C9 178.1 179.8
C3 C4 C5 CL1 359.4 0.3
C3 C4 C5 C6 181.5 179.7
C3 C4 C9 C8 177.5 180.0
C3 C4 C9 H9 357.5 0.0
C3 C4 C5 C9 181.7 180.2
C5 C4 C9 C8 359.4 0.2
C5 C4 C9 H9 179.4 180.3
CL1 C5 C4 C6 177.9 180.6
C4 C5 C6 C7 1.5 0.6
C4 C5 C6 H6 181.5 180.3
C3 C4 C9 C5 178.1 179.8
C9 C4 C5 CL1 177.7 180.1
C9 C4 C5 C6 359.9 359.5
C7 C8 C9 C4 0.0 0.1
C4 C9 C8 H8 180.0 180.0
C8 C9 C4 H9 180.0 180.0
CL1 C5 C4 C9 177.7 180.1
C4 C5 CL1 C6 182.1 179.4
CL1 C5 C6 C7 183.5 180.0
CL1 C5 C6 H6 3.5 359.7
C6 C5 C4 C9 359.9 359.5
C4 C5 C6 CL1 177.9 180.6
C7 C6 C5 H6 180.0 180.3
C5 C6 C7 C8 358.0 359.7
C5 C6 C7 S1 169.8 179.7
C5 C6 C7 H6 180.0 179.7
C8 C7 C6 S1 188.2 180.0
C6 C7 C8 C9 1.2 0.0
C6 C7 C8 H8 181.2 180.1
C6 C7 S1 O3 78.1 153.8
C6 C7 S1 O4 174.3 26.1
C6 C7 S1 C10 292.0 270.0
C5 C6 H6 C7 180.0 180.3
H6 C6 C7 C8 178.0 180.0
H6 C6 C7 S1 349.8 0.0
C4 C9 C8 C7 0.0 0.1
C8 C7 C6 H6 178.0 180.0
C6 C7 C8 S1 172.5 180.0
C8 C7 S1 O3 249.9 333.8
C8 C7 S1 O4 346.1 206.2
C8 C7 S1 C10 103.7 90.0
C9 C8 C7 H8 180.0 179.9
C7 C8 C9 H9 180.0 180.0
S1 C7 C6 H6 349.8 0.0
C6 C7 S1 C8 188.3 180.0
S1 C7 C8 C9 188.7 180.0
S1 C7 C8 H8 8.7 0.1
O3 S1 C7 O4 263.8 127.7
O3 S1 C7 C10 146.1 243.8
O4 S1 C7 C10 242.3 116.2
C7 S1 C10 H101 102.7 180.0
C7 S1 C10 H102 342.8 300.0
C7 S1 C10 H103 222.7 60.0
C4 C9 C8 H9 180.0 180.0
C9 C8 C7 S1 188.7 180.0
C7 C8 C9 H8 180.0 180.1
H8 C8 C7 S1 8.7 0.1
C7 C8 H8 C9 180.0 179.9
H8 C8 C9 H9 0.0 359.9
C4 C9 H9 C8 180.0 180.0
H9 C9 C8 H8 0.0 359.9
C7 S1 O3 O4 112.5 245.7
C7 S1 O3 C10 224.5 110.0
O4 S1 O3 C10 112.0 224.3
O3 S1 C10 H101 324.3 289.8
O3 S1 C10 H102 204.4 49.7
O3 S1 C10 H103 84.3 169.7
C7 S1 O4 O3 246.0 114.3
C7 S1 O4 C10 115.0 250.0
O3 S1 O4 C10 229.0 135.7
O4 S1 C10 H101 222.4 70.3
O4 S1 C10 H102 102.4 190.2
O4 S1 C10 H103 342.4 310.2
C7 S1 C10 O3 138.4 250.2
C7 S1 C10 O4 240.3 109.7
O3 S1 C10 O4 101.9 219.5
H101 C10 S1 H102 120.0 240.0
H101 C10 S1 H103 240.0 120.1
H102 C10 S1 H103 120.0 240.0
S1 C10 H101 H102 240.0 120.0
S1 C10 H101 H103 120.0 240.0
H102 C10 H101 H103 240.0 120.0
S1 C10 H102 H101 120.0 240.0
S1 C10 H102 H103 239.9 120.0
H101 C10 H102 H103 120.0 240.0
S1 C10 H103 H101 240.0 120.0
S1 C10 H103 H102 120.0 240.0
H101 C10 H103 H102 240.0 120.0
C1 N2 N1 C11 0.5 0.2
C2 C11 N1 C16 182.2 180.1
N1 C11 C16 C17 69.9 115.8
N1 C11 C16 C21 250.5 296.1
C11 N1 N2 C12 180.5 180.0
C2 C11 C16 N1 176.5 179.9
C16 C11 N1 N2 176.4 180.0
C17 C16 C11 C21 179.4 179.7
C11 C16 C17 CL2 0.3 0.3
C11 C16 C17 C18 180.4 179.8
C11 C16 C21 C20 179.3 180.0
C11 C16 C21 H21 359.3 360.0
C1 N2 N1 C12 180.0 180.2
N2 N1 C11 C16 176.4 180.0
N1 N2 C12 C13 75.7 360.0
N1 N2 C12 C14 185.7 240.0
N1 N2 C12 C15 324.2 120.0
C1 N2 C12 N1 180.1 179.8
C13 C12 N2 C14 249.9 120.0
C13 C12 N2 C15 111.5 240.0
N2 C12 C13 H131 329.3 180.0
N2 C12 C13 H132 209.4 300.0
N2 C12 C13 H133 89.4 60.0
C14 C12 N2 C15 221.6 120.0
N2 C12 C14 H141 195.6 60.0
N2 C12 C14 H142 75.6 180.0
N2 C12 C14 H143 315.6 300.0
N2 C12 C15 H151 87.9 300.0
N2 C12 C15 H152 327.8 60.0
N2 C12 C15 H153 207.8 179.9
N2 C12 C13 C14 125.7 240.0
N2 C12 C13 C15 244.0 120.0
C14 C12 C13 C15 118.3 240.0
C13 C12 C14 H141 303.7 299.9
C13 C12 C14 H142 183.7 60.0
C13 C12 C14 H143 63.7 180.0
C13 C12 C15 H151 341.5 60.0
C13 C12 C15 H152 221.5 180.0
C13 C12 C15 H153 101.5 300.0
H131 C13 C12 H132 120.0 240.0
H131 C13 C12 H133 240.0 120.0
H132 C13 C12 H133 120.0 240.0
N2 C12 C14 C13 252.0 120.0
N2 C12 C14 C15 138.2 240.0
C13 C12 C14 C15 246.3 119.9
C14 C12 C13 H131 203.7 300.0
C14 C12 C13 H132 83.7 60.0
C14 C12 C13 H133 323.7 180.0
C14 C12 C15 H151 230.4 180.0
C14 C12 C15 H152 110.4 299.9
C14 C12 C15 H153 350.4 59.9
H141 C14 C12 H142 120.0 239.9
H141 C14 C12 H143 240.0 120.0
H142 C14 C12 H143 120.0 240.0
N2 C12 C15 C13 106.3 240.0
N2 C12 C15 C14 217.5 120.0
C13 C12 C15 C14 111.1 240.1
C15 C12 C13 H131 85.4 60.0
C15 C12 C13 H132 325.4 180.0
C15 C12 C13 H133 205.4 300.0
C15 C12 C14 H141 57.4 180.0
C15 C12 C14 H142 297.4 300.1
C15 C12 C14 H143 177.4 60.0
H151 C15 C12 H152 120.0 240.0
H151 C15 C12 H153 240.0 120.1
H152 C15 C12 H153 120.0 240.0
H131 C13 C12 C14 203.7 300.0
H131 C13 C12 C15 85.4 60.0
C12 C13 H131 H132 240.0 120.0
C12 C13 H131 H133 120.0 240.0
H132 C13 H131 H133 240.0 120.0
H132 C13 C12 C14 83.7 60.0
H132 C13 C12 C15 325.4 180.0
C12 C13 H132 H131 120.0 240.0
C12 C13 H132 H133 240.0 120.0
H131 C13 H132 H133 120.0 240.0
H133 C13 C12 C14 323.7 180.0
H133 C13 C12 C15 205.4 300.0
C12 C13 H133 H131 240.0 120.0
C12 C13 H133 H132 120.0 240.0
H131 C13 H133 H132 240.0 120.0
H141 C14 C12 C15 57.4 180.0
C12 C14 H141 H142 240.0 120.2
C12 C14 H141 H143 120.0 240.0
H142 C14 H141 H143 240.0 119.9
H142 C14 C12 C15 297.4 300.1
C12 C14 H142 H141 120.0 239.9
C12 C14 H142 H143 240.0 120.0
H141 C14 H142 H143 120.0 240.1
H143 C14 C12 C15 177.4 60.0
C12 C14 H143 H141 240.0 120.0
C12 C14 H143 H142 120.0 239.9
H141 C14 H143 H142 240.0 119.9
C12 C15 H151 H152 240.0 119.9
C12 C15 H151 H153 120.0 240.0
H152 C15 H151 H153 240.1 120.0
C12 C15 H152 H151 120.0 240.0
C12 C15 H152 H153 240.0 120.0
H151 C15 H152 H153 120.0 239.9
C12 C15 H153 H151 240.0 120.0
C12 C15 H153 H152 120.0 240.0
H151 C15 H153 H152 240.0 120.0
C11 C16 C17 C21 180.5 180.3
C17 C16 C21 C20 360.0 0.3
C17 C16 C21 H21 180.0 180.3
CL2 C17 C16 C18 179.9 180.5
C16 C17 C18 C19 359.8 0.5
C16 C17 C18 H18 179.8 180.3
C11 C16 C21 C17 179.4 179.7
C21 C16 C17 CL2 179.7 180.0
C21 C16 C17 C18 359.9 359.5
C19 C20 C21 C16 0.4 0.0
C16 C21 C20 H20 180.4 180.0
C20 C21 C16 H21 180.0 180.0
CL2 C17 C16 C21 179.7 180.0
C16 C17 CL2 C18 180.2 179.5
CL2 C17 C18 C19 180.0 180.0
CL2 C17 C18 H18 360.0 359.8
C18 C17 C16 C21 359.9 359.5
C16 C17 C18 CL2 179.8 180.5
C19 C18 C17 H18 180.0 180.1
C17 C18 C19 CL3 180.4 179.7
C17 C18 C19 C20 0.6 359.9
C17 C18 C19 H18 180.0 179.9
CL3 C19 C18 C20 179.8 179.9
C18 C19 C20 C21 359.3 359.9
C18 C19 C20 H20 179.3 179.9
C17 C18 H18 C19 180.0 180.1
H18 C18 C19 CL3 0.4 359.9
H18 C18 C19 C20 180.6 180.0
CL3 C19 C18 H18 0.4 359.9
C18 C19 CL3 C20 180.2 180.1
CL3 C19 C20 C21 179.5 180.0
CL3 C19 C20 H20 359.5 0.0
C16 C21 C20 C19 0.4 0.0
C20 C19 C18 H18 180.6 180.0
C18 C19 C20 CL3 179.8 179.9
C21 C20 C19 H20 180.0 180.0
C19 C20 C21 H21 180.4 180.1
C16 C21 C20 H21 180.0 180.0
C19 C20 C21 H20 180.0 180.0
C19 C20 H20 C21 180.0 180.0
H20 C20 C21 H21 0.4 0.0
C16 C21 H21 C20 180.0 180.0
H21 C21 C20 H20 0.4 0.0