PDB Chemical Component 641

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 641

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C6 1.574 1.526
C1 H4 1.100 1.097
C1 H1 1.080 1.097
C1 C2 1.519 1.528
C2 C3 1.588 1.533
C2 H2 1.080 1.097
C2 H5 1.100 1.098
C3 N11 1.565 1.461
C3 H3 1.100 1.096
C3 C4 1.531 1.533
C4 H41 1.100 1.097
C4 H42 1.100 1.096
C4 C5 1.590 1.528
C5 H51 1.100 1.096
C5 H52 1.099 1.097
C5 C6 1.608 1.526
C6 H61 1.100 1.096
C6 H62 1.100 1.097
C7 N11 1.402 1.391
C7 O15 1.233 1.222
C7 C8 1.397 1.512
C8 C9 1.425 1.523
C8 H81 1.100 1.093
C8 H82 1.100 1.095
C9 C12 1.475 1.520
C9 H9 1.100 1.094
C9 C10 1.581 1.515
C10 H101 1.100 1.095
C10 H102 1.100 1.095
C10 N11 1.645 1.446
C12 N13 1.520 1.389
C12 O14 1.197 1.227
N13 HN13 1.000 1.017
N13 C15 0.946 1.415
C15 C16 1.433 1.385
C15 C20 1.430 1.386
C20 C19 1.470 1.395
C20 H20 1.080 1.088
C19 C18 1.474 1.395
C19 CL2 1.736 1.721
C18 C17 1.452 1.395
C18 H18 1.080 1.087
C17 C16 1.409 1.395
C17 CL1 1.733 1.721
C16 H16 1.079 1.089

Bond Angles for 641

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C6 C1 H4 122.6 109.5
C6 C1 H1 122.3 109.7
C2 C1 C6 115.4 111.7
C1 C6 C5 115.7 111.7
C1 C6 H61 107.4 109.7
C1 C6 H62 106.0 109.4
H4 C1 H1 0.4 106.9
C2 C1 H4 122.0 109.4
C2 C1 H1 122.3 109.6
C1 C2 C3 117.7 111.3
C1 C2 H2 121.1 109.6
C1 C2 H5 122.1 109.4
C3 C2 H2 121.2 110.0
C3 C2 H5 120.2 110.0
C2 C3 N11 100.2 109.9
C2 C3 H3 117.6 109.8
C2 C3 C4 113.6 111.2
H2 C2 H5 1.1 106.5
N11 C3 H3 110.2 106.3
C4 C3 N11 120.6 109.9
C3 N11 C7 105.4 125.3
C3 N11 C10 121.3 121.4
C4 C3 H3 95.7 109.8
C3 C4 H41 110.8 110.0
C3 C4 H42 111.7 110.0
C3 C4 C5 105.5 111.4
H41 C4 H42 106.4 106.5
C5 C4 H41 110.8 109.4
C5 C4 H42 111.7 109.6
C4 C5 H51 107.7 109.6
C4 C5 H52 106.5 109.4
C4 C5 C6 114.9 111.7
H51 C5 H52 113.8 106.9
C6 C5 H51 107.7 109.7
C6 C5 H52 106.5 109.4
C5 C6 H61 107.5 109.7
C5 C6 H62 106.0 109.3
H61 C6 H62 114.5 107.0
N11 C7 O15 127.9 128.2
C8 C7 N11 113.5 107.3
C7 N11 C10 105.5 113.1
C8 C7 O15 118.6 124.5
C7 C8 C9 112.5 104.2
C7 C8 H81 108.5 110.2
C7 C8 H82 107.8 108.0
C9 C8 H81 108.5 113.4
C9 C8 H82 107.8 111.0
C8 C9 C12 112.7 108.9
C8 C9 H9 107.6 113.3
C8 C9 C10 107.0 105.0
H81 C8 H82 111.8 109.8
C12 C9 H9 109.8 107.2
C10 C9 C12 104.6 109.1
C9 C12 N13 109.8 111.1
C9 C12 O14 122.0 120.8
C10 C9 H9 115.3 113.2
C9 C10 H101 112.2 113.9
C9 C10 H102 113.8 111.6
C9 C10 N11 101.6 103.9
H101 C10 H102 103.6 109.8
N11 C10 H101 112.2 109.7
N11 C10 H102 113.9 107.7
N13 C12 O14 128.2 128.1
C12 N13 HN13 115.0 117.1
C12 N13 C15 130.0 127.5
C15 N13 HN13 115.0 115.4
N13 C15 C16 125.8 119.3
N13 C15 C20 114.7 119.3
C20 C15 C16 119.5 121.4
C15 C16 C17 123.0 119.3
C15 C16 H16 118.5 120.6
C15 C20 C19 119.3 119.3
C15 C20 H20 120.4 120.6
C19 C20 H20 120.4 120.1
C20 C19 C18 120.1 120.0
C20 C19 CL2 119.8 120.0
CL2 C19 C18 120.1 120.0
C19 C18 C17 118.5 120.0
C19 C18 H18 120.8 120.0
C17 C18 H18 120.7 120.0
C18 C17 C16 119.7 120.0
C18 C17 CL1 123.3 120.0
C16 C17 CL1 117.0 120.0
C17 C16 H16 118.5 120.1

Torsion Angles for 641

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H4 C1 C6 H1 359.7 243.0
C2 C1 C6 H4 180.3 238.7
C2 C1 C6 H1 180.0 121.7
C6 C1 C2 C3 30.0 54.8
C6 C1 C2 H2 210.0 176.7
C6 C1 C2 H5 210.5 293.0
C4 C5 C6 C1 41.7 54.3
C1 C6 C5 H51 161.7 176.1
C1 C6 C5 H52 284.1 293.1
C5 C6 C1 H61 240.0 121.8
C5 C6 C1 H62 117.1 238.8
H61 C6 C1 H62 237.2 117.0
C6 C1 H4 H1 34.3 118.7
C2 C1 H4 C6 179.7 122.7
H4 C1 C6 C5 153.4 66.9
H4 C1 C6 H61 273.4 305.1
H4 C1 C6 H62 36.3 188.1
C2 C1 H4 H1 214.0 241.4
H4 C1 C2 C3 210.2 293.5
H4 C1 C2 H2 30.2 55.3
H4 C1 C2 H5 30.8 171.7
C6 C1 H1 H4 214.2 241.4
C2 C1 H1 C6 180.0 237.1
H1 C1 C6 C5 153.7 183.9
H1 C1 C6 H61 273.7 62.1
H1 C1 C6 H62 36.6 305.1
C2 C1 H1 H4 34.2 118.5
H1 C1 C2 C3 210.0 176.5
H1 C1 C2 H2 29.9 298.4
H1 C1 C2 H5 30.5 54.7
C6 C1 C2 H4 179.7 121.3
C6 C1 C2 H1 180.0 238.3
C2 C1 C6 C5 333.7 305.6
C2 C1 C6 H61 93.7 183.8
C2 C1 C6 H62 216.5 66.8
H4 C1 C2 H1 0.3 116.9
C3 C2 C1 H2 180.0 238.1
C3 C2 C1 H5 179.5 121.8
C1 C2 C3 N11 180.1 183.1
C1 C2 C3 H3 60.8 66.6
C1 C2 C3 C4 310.2 304.9
H2 C2 C1 H5 359.4 243.7
C3 C2 C1 C6 30.0 54.8
C3 C2 C1 H4 210.2 293.5
C3 C2 C1 H1 210.0 176.5
C1 C2 C3 H2 180.0 121.6
C1 C2 C3 H5 180.5 238.6
H2 C2 C3 H5 0.5 117.0
N11 C3 C2 H3 119.4 116.5
C4 C3 C2 N11 130.0 121.8
C2 C3 N11 C7 202.6 241.3
C2 C3 N11 C10 83.1 55.7
C4 C3 C2 H3 249.4 238.3
C2 C3 C4 H41 300.1 293.7
C2 C3 C4 H42 181.6 176.8
C2 C3 C4 C5 60.1 55.1
H2 C2 C1 C6 210.0 176.7
H2 C2 C1 H4 30.2 55.3
H2 C2 C1 H1 29.9 298.4
C1 C2 H2 C3 180.0 237.3
C1 C2 H2 H5 153.2 118.1
C3 C2 H2 H5 333.2 240.8
H2 C2 C3 N11 0.1 61.5
H2 C2 C3 H3 240.8 305.0
H2 C2 C3 C4 130.2 183.3
H5 C2 C1 C6 210.5 293.0
H5 C2 C1 H4 30.8 171.7
H5 C2 C1 H1 30.5 54.7
C1 C2 H5 C3 179.4 122.6
C1 C2 H5 H2 332.9 241.7
C3 C2 H5 H2 153.5 119.1
H5 C2 C3 N11 359.6 304.5
H5 C2 C3 H3 240.2 188.0
H5 C2 C3 C4 129.6 66.3
N11 C3 C2 H2 0.1 61.5
N11 C3 C2 H5 359.6 304.5
C2 C3 N11 H3 235.3 241.3
C2 C3 N11 C4 125.4 122.6
C4 C3 N11 H3 109.9 118.7
N11 C3 C4 H41 59.0 55.5
N11 C3 C4 H42 300.5 298.6
N11 C3 C4 C5 179.0 176.9
C3 N11 C7 O15 50.4 357.6
C8 C7 N11 C3 230.1 175.6
C7 N11 C3 C10 119.5 185.6
C9 C10 N11 C3 119.4 168.7
C3 N11 C10 H101 239.5 46.6
C3 N11 C10 H102 356.7 287.2
H3 C3 C2 H2 240.8 305.0
H3 C3 C2 H5 240.2 188.0
C2 C3 H3 N11 114.0 118.8
C2 C3 H3 C4 239.5 237.5
C4 C3 H3 N11 234.4 241.2
H3 C3 N11 C7 327.2 360.0
H3 C3 N11 C10 207.8 174.4
H3 C3 C4 H41 176.5 172.0
H3 C3 C4 H42 58.0 55.1
H3 C3 C4 C5 296.5 293.4
C4 C3 C2 H2 130.2 183.3
C4 C3 C2 H5 129.6 66.3
C2 C3 C4 N11 241.1 238.2
C2 C3 C4 H3 123.6 121.7
N11 C3 C4 H3 242.5 243.5
C4 C3 N11 C7 77.2 118.7
C4 C3 N11 C10 317.7 293.1
H41 C4 C3 H42 118.5 116.9
C5 C4 C3 H41 120.0 121.4
C5 C4 C3 H42 238.5 238.3
C3 C4 C5 H51 182.8 183.5
C3 C4 C5 H52 60.4 66.5
C3 C4 C5 C6 302.8 305.3
H41 C4 C3 N11 59.0 55.5
H41 C4 C3 H3 176.5 172.0
C3 C4 H41 H42 238.4 240.9
C3 C4 H41 C5 116.8 122.6
C5 C4 H41 H42 121.6 118.4
H41 C4 C5 H51 302.8 305.2
H41 C4 C5 H52 180.4 188.3
H41 C4 C5 C6 62.8 67.0
H42 C4 C3 N11 300.5 298.6
H42 C4 C3 H3 58.0 55.1
C3 C4 H42 H41 121.1 119.1
C3 C4 H42 C5 242.1 237.3
C5 C4 H42 H41 239.0 241.8
H42 C4 C5 H51 61.3 61.6
H42 C4 C5 H52 298.9 304.6
H42 C4 C5 C6 181.3 183.4
C1 C6 C5 C4 41.7 54.3
C5 C4 C3 N11 179.0 176.9
C5 C4 C3 H3 296.5 293.4
C3 C4 C5 H41 240.0 238.3
C3 C4 C5 H42 121.5 121.9
H41 C4 C5 H42 241.5 243.6
H51 C5 C4 H52 122.4 117.0
C6 C5 C4 H51 120.0 121.8
C6 C5 C4 H52 242.4 238.7
C4 C5 C6 H61 281.7 176.1
C4 C5 C6 H62 158.9 293.1
H51 C5 C4 H41 302.8 305.2
H51 C5 C4 H42 61.3 61.6
C4 C5 H51 H52 242.2 241.5
C4 C5 H51 C6 124.4 122.9
C6 C5 H51 H52 117.8 118.6
H51 C5 C6 H61 41.7 297.9
H51 C5 C6 H62 278.8 54.9
H52 C5 C4 H41 180.4 188.3
H52 C5 C4 H42 298.9 304.6
C4 C5 H52 H51 118.5 118.7
C4 C5 H52 C6 237.0 237.4
C6 C5 H52 H51 241.5 241.3
H52 C5 C6 H61 164.1 54.9
H52 C5 C6 H62 41.2 171.9
C5 C6 C1 H4 153.4 66.9
C5 C6 C1 H1 153.7 183.9
C1 C6 C5 H61 120.0 238.2
C1 C6 C5 H62 242.9 121.2
C6 C5 C4 H41 62.8 67.0
C6 C5 C4 H42 181.3 183.4
C4 C5 C6 H51 240.0 238.3
C4 C5 C6 H52 117.6 121.2
H51 C5 C6 H52 237.6 243.0
H61 C6 C5 H62 122.8 243.0
H61 C6 C1 H4 273.4 305.1
H61 C6 C1 H1 273.7 62.1
C1 C6 H61 C5 234.8 123.0
C1 C6 H61 H62 117.4 241.5
H61 C6 C5 H51 41.7 297.9
H61 C6 C5 H52 164.1 54.9
C5 C6 H61 H62 242.6 118.5
H62 C6 C1 H4 36.3 188.1
H62 C6 C1 H1 36.6 305.1
C1 C6 H62 C5 123.5 237.4
C1 C6 H62 H61 241.8 118.7
H62 C6 C5 H51 278.8 54.9
H62 C6 C5 H52 41.2 171.9
C5 C6 H62 H61 118.3 241.3
C7 N11 C3 H3 327.2 360.0
C3 N11 C7 C10 230.5 174.8
C8 C7 N11 O15 179.7 178.0
N11 C7 C8 C9 0.6 15.0
N11 C7 C8 H81 120.6 136.9
N11 C7 C8 H82 241.9 256.9
C9 C10 N11 C7 0.1 343.7
C7 N11 C10 H101 120.1 221.6
C7 N11 C10 H102 237.3 102.2
C8 C7 O15 N11 180.3 182.4
O15 C7 N11 C10 179.9 182.8
O15 C7 C8 C9 180.4 193.0
O15 C7 C8 H81 300.4 315.0
O15 C7 C8 H82 61.6 74.9
C3 N11 C7 C8 230.1 175.6
N11 C7 C8 O15 180.3 181.9
C8 C7 N11 C10 359.6 0.8
C9 C8 C7 H81 240.0 238.1
C9 C8 C7 H82 118.7 118.1
C7 C8 C9 C12 113.9 92.5
C7 C8 C9 H9 235.0 211.7
C7 C8 C9 C10 359.5 335.7
H81 C8 C7 H82 238.7 240.0
C9 C8 C7 N11 0.6 15.0
C9 C8 C7 O15 180.4 193.0
C7 C8 C9 H81 120.0 119.8
C7 C8 C9 H82 241.3 244.0
H81 C8 C9 H82 121.3 124.2
C12 C9 C8 H9 238.8 240.8
C10 C9 C8 C12 245.6 243.2
C8 C9 C12 N13 89.3 93.1
C8 C9 C12 O14 270.2 272.9
C10 C9 C8 H9 124.4 124.0
C8 C9 C10 H101 240.3 144.0
C8 C9 C10 H102 123.1 269.0
C8 C9 C10 N11 0.3 24.6
H81 C8 C7 N11 120.6 136.9
H81 C8 C7 O15 300.4 315.0
C7 C8 H81 C9 237.5 243.7
C7 C8 H81 H82 118.8 118.9
C9 C8 H81 H82 241.2 235.2
H81 C8 C9 C12 353.9 332.7
H81 C8 C9 H9 115.0 91.9
H81 C8 C9 C10 239.5 215.9
H82 C8 C7 N11 241.9 256.9
H82 C8 C7 O15 61.6 74.9
C7 C8 H82 C9 121.6 113.6
C7 C8 H82 H81 240.8 239.8
C9 C8 H82 H81 119.2 126.2
H82 C8 C9 C12 232.6 208.5
H82 C8 C9 H9 353.8 327.7
H82 C8 C9 C10 118.2 91.7
C12 C9 C8 H81 353.9 332.7
C12 C9 C8 H82 232.6 208.5
C8 C9 C12 H9 119.9 122.9
C8 C9 C12 C10 244.2 245.9
C10 C9 C12 H9 235.7 237.1
C12 C9 C10 H101 120.5 27.3
C12 C9 C10 H102 3.3 152.3
C12 C9 C10 N11 240.5 268.0
N13 C12 C9 O14 179.1 180.2
C9 C12 N13 HN13 22.5 0.1
C9 C12 N13 C15 202.5 180.0
H9 C9 C8 H81 115.0 91.9
H9 C9 C8 H82 353.8 327.7
C8 C9 H9 C12 237.0 239.8
C8 C9 H9 C10 119.2 119.4
C10 C9 H9 C12 117.8 120.4
H9 C9 C12 N13 329.4 330.2
H9 C9 C12 O14 150.3 150.0
H9 C9 C10 H101 359.8 268.1
H9 C9 C10 H102 242.6 33.1
H9 C9 C10 N11 119.8 148.7
C3 N11 C10 C9 119.4 168.7
C7 N11 C10 C9 0.1 343.7
C10 C9 C8 H81 239.5 215.9
C10 C9 C8 H82 118.2 91.7
C8 C9 C10 C12 119.8 116.6
C8 C9 C10 H9 240.4 235.9
C12 C9 C10 H9 120.7 119.3
C10 C9 C12 N13 205.1 207.2
C10 C9 C12 O14 26.0 27.1
H101 C10 C9 H102 117.2 235.0
N11 C10 C9 H101 120.0 240.7
N11 C10 C9 H102 237.2 115.7
H101 C10 C9 C12 120.5 27.3
H101 C10 C9 H9 359.8 268.1
C9 C10 H101 H102 236.8 125.9
C9 C10 H101 N11 113.6 244.1
N11 C10 H101 H102 123.2 241.9
H102 C10 C9 C12 3.3 152.3
H102 C10 C9 H9 242.6 33.1
C9 C10 H102 H101 122.1 232.8
C9 C10 H102 N11 244.2 113.4
N11 C10 H102 H101 237.9 119.4
C10 N11 C3 H3 207.8 174.4
C3 N11 C10 C7 119.4 185.0
C10 N11 C7 O15 179.9 182.8
N11 C10 C9 C12 240.5 268.0
N11 C10 C9 H9 119.8 148.7
C9 C10 N11 H101 240.0 122.1
C9 C10 N11 H102 122.8 241.6
H101 C10 N11 H102 242.8 119.5
N13 C12 C9 H9 329.4 330.2
C9 C12 N13 O14 181.0 179.8
C15 N13 C12 HN13 180.0 179.9
C12 N13 C15 C16 340.9 180.1
C12 N13 C15 C20 160.9 0.0
O14 C12 C9 H9 150.3 150.0
C9 C12 O14 N13 178.9 180.2
O14 C12 N13 HN13 201.5 180.2
O14 C12 N13 C15 21.6 0.2
HN13 N13 C12 O14 201.5 180.2
C12 N13 HN13 C15 180.0 179.9
HN13 N13 C15 C16 161.0 0.0
HN13 N13 C15 C20 340.9 180.0
C15 N13 C12 O14 21.6 0.2
C12 N13 C15 HN13 180.0 180.1
C20 C15 N13 C16 179.9 180.0
N13 C15 C16 C17 179.9 180.0
N13 C15 C16 H16 359.9 360.0
N13 C15 C20 C19 180.1 180.0
N13 C15 C20 H20 0.1 0.0
C16 C15 N13 HN13 161.0 0.0
N13 C15 C16 C20 179.9 180.0
C16 C15 C20 C19 360.0 360.0
C16 C15 C20 H20 180.0 180.0
C18 C17 C16 C15 0.1 360.0
C15 C16 C17 CL1 180.1 180.0
C17 C16 C15 H16 180.0 180.0
C20 C15 N13 HN13 340.9 180.0
N13 C15 C20 C16 180.1 180.0
C20 C15 C16 C17 359.9 0.0
C20 C15 C16 H16 179.9 180.0
C19 C20 C15 H20 180.0 180.0
C15 C20 C19 C18 0.1 0.0
C15 C20 C19 CL2 180.1 180.0
C19 C20 C15 C16 360.0 360.0
C15 C20 C19 H20 180.0 180.0
CL2 C19 C20 C18 180.0 180.0
C20 C19 C18 C17 360.0 360.0
C20 C19 C18 H18 180.0 180.0
H20 C20 C15 C16 180.0 180.0
C15 C20 H20 C19 180.0 180.0
H20 C20 C19 C18 180.1 180.0
H20 C20 C19 CL2 0.1 360.0
C18 C19 C20 H20 180.1 180.0
C20 C19 C18 CL2 180.0 180.0
C17 C18 C19 H18 180.0 180.0
C19 C18 C17 C16 360.0 0.0
C19 C18 C17 CL1 180.0 180.0
CL2 C19 C20 H20 0.1 360.0
C20 C19 CL2 C18 180.0 180.0
CL2 C19 C18 C17 180.0 180.0
CL2 C19 C18 H18 360.0 0.0
C15 C16 C17 C18 0.1 360.0
C19 C18 C17 H18 180.0 180.0
C16 C17 C18 CL1 180.0 180.0
C18 C17 C16 H16 180.1 180.0
C19 C18 H18 C17 180.0 180.0
H18 C18 C17 C16 180.0 180.0
H18 C18 C17 CL1 360.0 360.0
C15 C16 C17 H16 180.0 180.0
C16 C17 C18 H18 180.0 180.0
C18 C17 C16 CL1 180.0 180.0
CL1 C17 C18 H18 360.0 360.0
C18 C17 CL1 C16 180.0 180.0
CL1 C17 C16 H16 0.1 0.0
C15 C16 H16 C17 180.0 180.0
H16 C16 C17 CL1 0.1 0.0