PDB Chemical Component 63M
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 63M
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O19 |
S18 |
1.422 |
1.421 |
| S18 |
N17 |
1.656 |
1.655 |
| S18 |
O20 |
1.424 |
1.421 |
| S18 |
C21 |
1.773 |
1.762 |
| C26 |
N25 |
1.468 |
1.465 |
| N17 |
C14 |
1.383 |
1.382 |
| N25 |
C21 |
1.362 |
1.350 |
| N25 |
N24 |
1.399 |
1.400 |
| C21 |
C22 |
1.356 |
1.353 |
| C15 |
C14 |
1.415 |
1.409 |
| C15 |
C16 |
1.352 |
1.353 |
| C14 |
N13 |
1.334 |
1.322 |
| C22 |
C23 |
1.397 |
1.399 |
| N24 |
C23 |
1.313 |
1.309 |
| C16 |
N11 |
1.370 |
1.366 |
| N13 |
C12 |
1.349 |
1.333 |
| N11 |
C12 |
1.379 |
1.365 |
| N11 |
N10 |
1.399 |
1.399 |
| C12 |
C8 |
1.406 |
1.409 |
| C1 |
C2 |
1.528 |
1.530 |
| N5 |
C2 |
1.481 |
1.464 |
| N5 |
C6 |
1.363 |
1.347 |
| N10 |
C9 |
1.304 |
1.306 |
| C8 |
C6 |
1.465 |
1.464 |
| C8 |
C9 |
1.411 |
1.408 |
| C2 |
C4 |
1.532 |
1.531 |
| C2 |
C3 |
1.534 |
1.530 |
| C6 |
O7 |
1.229 |
1.217 |
| C4 |
H1 |
1.100 |
1.090 |
| C4 |
H2 |
1.100 |
1.090 |
| C4 |
H3 |
1.099 |
1.090 |
| C9 |
H4 |
1.080 |
1.080 |
| C3 |
H5 |
1.101 |
1.090 |
| C3 |
H6 |
1.100 |
1.089 |
| C3 |
H7 |
1.100 |
1.091 |
| C1 |
H8 |
1.100 |
1.090 |
| C1 |
H9 |
1.100 |
1.090 |
| C1 |
H10 |
1.100 |
1.089 |
| N5 |
H11 |
1.000 |
0.970 |
| C15 |
H12 |
1.080 |
1.080 |
| C16 |
H13 |
1.080 |
1.080 |
| N17 |
H14 |
1.000 |
0.970 |
| C22 |
H15 |
1.080 |
1.080 |
| C23 |
H16 |
1.080 |
1.080 |
| C26 |
H17 |
1.100 |
1.090 |
| C26 |
H18 |
1.099 |
1.090 |
| C26 |
H19 |
1.100 |
1.090 |
Bond Angles for 63M
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O19 |
S18 |
O20 |
123.3 |
123.1 |
| O19 |
S18 |
C21 |
105.5 |
106.4 |
| S18 |
N17 |
H14 |
105.2 |
120.0 |
| O20 |
S18 |
C21 |
105.9 |
106.4 |
| S18 |
C21 |
C22 |
125.5 |
126.1 |
| C21 |
C22 |
C23 |
107.9 |
107.9 |
| C21 |
C22 |
H15 |
126.1 |
126.0 |
| C16 |
C15 |
H12 |
120.0 |
120.3 |
| C15 |
C16 |
H13 |
120.5 |
120.3 |
| C14 |
N13 |
C12 |
119.9 |
120.8 |
| C23 |
C22 |
H15 |
126.0 |
126.1 |
| C22 |
C23 |
H16 |
125.8 |
125.9 |
| N24 |
C23 |
H16 |
125.8 |
125.9 |
| C2 |
C1 |
H8 |
109.5 |
109.4 |
| C2 |
C1 |
H9 |
109.5 |
109.4 |
| C2 |
C1 |
H10 |
109.5 |
109.5 |
| N5 |
C6 |
O7 |
122.6 |
120.0 |
| N10 |
C9 |
H4 |
125.2 |
125.7 |
| C8 |
C6 |
O7 |
119.1 |
120.0 |
| C8 |
C9 |
H4 |
125.3 |
125.6 |
| C2 |
C4 |
H1 |
109.5 |
109.5 |
| C2 |
C4 |
H2 |
109.5 |
109.4 |
| C2 |
C4 |
H3 |
109.5 |
109.5 |
| C2 |
C3 |
H5 |
109.5 |
109.4 |
| C2 |
C3 |
H6 |
109.5 |
109.5 |
| C2 |
C3 |
H7 |
109.4 |
109.5 |
| H1 |
C4 |
H2 |
109.5 |
109.5 |
| H1 |
C4 |
H3 |
109.5 |
109.5 |
| H2 |
C4 |
H3 |
109.4 |
109.5 |
| H5 |
C3 |
H6 |
109.4 |
109.5 |
| H5 |
C3 |
H7 |
109.5 |
109.4 |
| H6 |
C3 |
H7 |
109.5 |
109.4 |
| H8 |
C1 |
H9 |
109.4 |
109.5 |
| H8 |
C1 |
H10 |
109.4 |
109.5 |
| H9 |
C1 |
H10 |
109.5 |
109.5 |
| H17 |
C26 |
H18 |
109.5 |
109.5 |
| H17 |
C26 |
H19 |
109.5 |
109.5 |
| H18 |
C26 |
H19 |
109.4 |
109.5 |
Torsion Angles for 63M
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O19 |
S18 |
N17 |
H14 |
312.4 |
0.8 |
| O20 |
S18 |
O19 |
C21 |
121.6 |
122.9 |
| O19 |
S18 |
C21 |
C22 |
249.5 |
326.4 |
| O19 |
S18 |
O20 |
C21 |
238.6 |
237.1 |
| O20 |
S18 |
N17 |
H14 |
85.0 |
133.8 |
| O20 |
S18 |
C21 |
C22 |
117.2 |
193.5 |
| O19 |
S18 |
C21 |
O20 |
132.3 |
132.9 |
| C21 |
S18 |
N17 |
H14 |
200.4 |
247.3 |
| S18 |
C21 |
C22 |
C23 |
178.9 |
180.0 |
| S18 |
C21 |
C22 |
H15 |
358.9 |
359.9 |
| N25 |
C21 |
C22 |
H15 |
180.5 |
180.2 |
| N25 |
N24 |
C23 |
H16 |
179.5 |
179.8 |
| C23 |
C22 |
C21 |
H15 |
180.0 |
180.1 |
| C21 |
C22 |
C23 |
H16 |
180.0 |
179.9 |
| C21 |
C22 |
C23 |
H15 |
180.0 |
179.9 |
| N24 |
C23 |
C22 |
H16 |
180.0 |
180.1 |
| N24 |
C23 |
C22 |
H15 |
180.0 |
180.0 |
| C22 |
C23 |
N24 |
H16 |
180.0 |
179.9 |
| C14 |
N13 |
C12 |
N11 |
1.8 |
0.0 |
| N11 |
N10 |
C9 |
H4 |
181.8 |
180.0 |
| C14 |
N13 |
C12 |
C8 |
180.0 |
180.0 |
| C12 |
C8 |
C6 |
O7 |
197.7 |
5.1 |
| C12 |
C8 |
C9 |
H4 |
178.4 |
180.0 |
| C1 |
C2 |
C4 |
H1 |
180.0 |
55.7 |
| C1 |
C2 |
C4 |
H2 |
300.0 |
175.7 |
| C1 |
C2 |
C4 |
H3 |
60.0 |
295.6 |
| C1 |
C2 |
C3 |
H5 |
180.0 |
60.0 |
| C1 |
C2 |
C3 |
H6 |
300.0 |
180.1 |
| C1 |
C2 |
C3 |
H7 |
60.0 |
300.1 |
| H8 |
C1 |
C2 |
H9 |
240.0 |
240.1 |
| H8 |
C1 |
C2 |
H10 |
120.0 |
120.1 |
| H9 |
C1 |
C2 |
H10 |
240.0 |
240.0 |
| N5 |
C2 |
C1 |
H8 |
180.0 |
300.0 |
| N5 |
C2 |
C1 |
H9 |
300.0 |
60.0 |
| N5 |
C2 |
C1 |
H10 |
60.0 |
180.0 |
| C2 |
N5 |
C6 |
O7 |
357.8 |
354.7 |
| N5 |
C2 |
C4 |
H1 |
61.6 |
175.7 |
| N5 |
C2 |
C4 |
H2 |
181.6 |
295.8 |
| N5 |
C2 |
C4 |
H3 |
301.6 |
55.7 |
| N5 |
C2 |
C3 |
H5 |
297.8 |
299.9 |
| N5 |
C2 |
C3 |
H6 |
57.7 |
60.0 |
| N5 |
C2 |
C3 |
H7 |
177.8 |
180.0 |
| C8 |
C6 |
N5 |
O7 |
184.0 |
180.0 |
| C8 |
C9 |
N10 |
H4 |
180.0 |
180.0 |
| N5 |
C6 |
C8 |
O7 |
176.2 |
180.0 |
| N10 |
C9 |
C8 |
H4 |
180.0 |
180.0 |
| C9 |
C8 |
C6 |
O7 |
10.2 |
185.1 |
| H1 |
C4 |
C2 |
H2 |
240.0 |
240.0 |
| H1 |
C4 |
C2 |
H3 |
120.0 |
120.0 |
| H2 |
C4 |
C2 |
H3 |
240.0 |
240.0 |
| C3 |
C2 |
C4 |
H1 |
296.2 |
295.7 |
| C3 |
C2 |
C4 |
H2 |
56.2 |
55.7 |
| C3 |
C2 |
C4 |
H3 |
176.2 |
175.7 |
| H5 |
C3 |
C2 |
H6 |
240.0 |
239.9 |
| H5 |
C3 |
C2 |
H7 |
120.0 |
119.9 |
| H6 |
C3 |
C2 |
H7 |
240.0 |
240.0 |
| C2 |
C4 |
H1 |
H2 |
120.0 |
120.0 |
| C2 |
C4 |
H1 |
H3 |
240.0 |
240.0 |
| H2 |
C4 |
H1 |
H3 |
120.0 |
120.0 |
| C2 |
C4 |
H2 |
H1 |
240.0 |
240.0 |
| C2 |
C4 |
H2 |
H3 |
120.0 |
120.0 |
| H1 |
C4 |
H2 |
H3 |
240.0 |
240.0 |
| C2 |
C4 |
H3 |
H1 |
120.0 |
120.0 |
| C2 |
C4 |
H3 |
H2 |
240.0 |
240.1 |
| H1 |
C4 |
H3 |
H2 |
120.0 |
120.0 |
| C2 |
C3 |
H5 |
H6 |
120.0 |
120.0 |
| C2 |
C3 |
H5 |
H7 |
240.0 |
240.0 |
| H6 |
C3 |
H5 |
H7 |
120.0 |
120.0 |
| C2 |
C3 |
H6 |
H5 |
240.0 |
240.0 |
| C2 |
C3 |
H6 |
H7 |
120.0 |
120.0 |
| H5 |
C3 |
H6 |
H7 |
240.0 |
240.0 |
| C2 |
C3 |
H7 |
H5 |
120.0 |
119.9 |
| C2 |
C3 |
H7 |
H6 |
240.0 |
240.0 |
| H5 |
C3 |
H7 |
H6 |
120.0 |
120.0 |
| C2 |
C1 |
H8 |
H9 |
120.0 |
119.9 |
| C2 |
C1 |
H8 |
H10 |
240.0 |
239.9 |
| H9 |
C1 |
H8 |
H10 |
120.0 |
120.0 |
| C2 |
C1 |
H9 |
H8 |
240.0 |
240.1 |
| C2 |
C1 |
H9 |
H10 |
120.0 |
120.0 |
| H8 |
C1 |
H9 |
H10 |
240.0 |
239.9 |
| C2 |
C1 |
H10 |
H8 |
120.1 |
120.0 |
| C2 |
C1 |
H10 |
H9 |
240.0 |
240.0 |
| H8 |
C1 |
H10 |
H9 |
120.0 |
120.0 |
| H11 |
N5 |
C6 |
O7 |
177.9 |
174.6 |
| H12 |
C15 |
C16 |
H13 |
357.4 |
359.9 |
| H13 |
C16 |
C15 |
H12 |
357.4 |
359.9 |
| C21 |
C22 |
H15 |
C23 |
180.0 |
180.1 |
| H15 |
C22 |
C23 |
H16 |
0.0 |
360.0 |
| H16 |
C23 |
C22 |
H15 |
0.0 |
360.0 |
| H18 |
C26 |
H17 |
H19 |
120.0 |
120.0 |
| H17 |
C26 |
H18 |
H19 |
240.0 |
239.9 |
| H17 |
C26 |
H19 |
H18 |
120.0 |
120.0 |