PDB Chemical Component 62Q

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 62Q

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N3 C16 1.312 1.319
N3 C15 1.350 1.317
C16 C17 1.410 1.383
C39 C38 1.550 1.530
C15 C14 1.401 1.395
C38 C37 1.539 1.530
C17 C18 1.412 1.384
C14 C18 1.423 1.400
C14 C13 1.505 1.479
C18 C36 1.528 1.508
C13 O3 1.268 1.216
C13 N1 1.383 1.347
C37 C4 1.537 1.530
N1 C3 1.503 1.469
N1 C4 1.530 1.470
C3 C2 1.540 1.531
C4 C5 1.579 1.531
C36 F4 1.363 1.399
C36 F6 1.355 1.399
C36 F5 1.384 1.399
C2 C1 1.523 1.531
C5 C1 1.584 1.530
C5 C6 1.568 1.506
C5 O2 1.459 1.429
C22 N2 1.490 1.471
C22 C21 1.590 1.536
C6 N2 1.401 1.348
C6 O1 1.245 1.214
O5 C33 1.461 1.429
N2 C19 1.504 1.471
O2 C7 1.307 1.360
C19 C20 1.566 1.533
C21 N4 1.523 1.470
C33 C32 1.575 1.530
C7 C8 1.406 1.388
C7 C12 1.408 1.387
C8 C9 1.425 1.381
N4 C20 1.483 1.470
N4 C23 1.475 1.399
C32 O4 1.437 1.430
C12 C11 1.411 1.381
C9 C10 1.411 1.383
O4 C28 1.412 1.360
C23 C28 1.418 1.393
C23 C24 1.442 1.388
C11 C10 1.402 1.383
C28 C27 1.441 1.385
C24 C25 1.392 1.383
C10 C35 1.514 1.507
C27 C26 1.427 1.383
C25 C26 1.385 1.382
C35 F2 1.382 1.399
C35 F1 1.341 1.399
C35 F3 1.359 1.399
C1 H1 1.100 1.090
C1 H2 1.100 1.091
C2 H3 1.100 1.090
C2 H4 1.100 1.090
C3 H5 1.100 1.090
C3 H6 1.100 1.090
C4 H7 1.100 1.091
C8 H8 1.080 1.080
C9 H9 1.080 1.081
C11 H10 1.080 1.080
C12 H11 1.080 1.080
C15 H12 1.080 1.079
C16 H13 1.080 1.080
C17 H14 1.080 1.080
C19 H15 1.100 1.090
C19 H16 1.100 1.090
C20 H17 1.100 1.089
C20 H18 1.100 1.090
C21 H19 1.100 1.089
C21 H20 1.101 1.089
C22 H21 1.100 1.091
C22 H22 1.099 1.090
C24 H23 1.080 1.079
C25 H24 1.080 1.080
C26 H25 1.080 1.080
C27 H26 1.080 1.080
C32 H27 1.101 1.090
C32 H28 1.100 1.090
C33 H29 1.100 1.090
C33 H30 1.100 1.091
O5 H31 0.950 0.967
C37 H32 1.099 1.089
C37 H33 1.100 1.091
C38 H34 1.100 1.090
C38 H35 1.100 1.090
C39 H36 1.100 1.090
C39 H37 1.100 1.089
C39 H38 1.100 1.089

Bond Angles for 62Q

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N3 C16 C17 120.6 121.1
N3 C16 H13 119.7 119.4
N3 C15 H12 117.9 119.7
C16 C17 C18 120.5 119.3
C17 C16 H13 119.7 119.5
C16 C17 H14 119.7 120.4
C39 C38 H34 108.0 109.5
C39 C38 H35 108.0 109.5
C15 C14 C18 116.4 118.9
C38 C37 H32 108.3 109.5
C38 C37 H33 108.3 109.4
C14 C18 C17 118.0 118.3
C17 C18 C36 119.1 120.9
C18 C17 H14 119.8 120.3
C14 C18 C36 122.8 120.8
C37 C4 H7 105.3 109.7
N1 C3 H5 108.8 109.6
N1 C3 H6 108.8 109.7
N1 C4 C5 109.5 108.8
N1 C4 H7 105.4 109.5
C3 C2 H3 108.7 109.5
C3 C2 H4 108.7 109.5
C4 C5 C6 108.6 109.5
C4 C5 O2 104.7 109.5
C5 C4 H7 104.9 109.6
C2 C1 H1 108.3 109.5
C2 C1 H2 108.3 109.5
C5 C1 H1 108.3 109.5
C5 C1 H2 108.3 109.4
C6 C5 O2 115.3 109.5
C5 C6 N2 122.1 120.0
C5 C6 O1 117.4 120.0
C5 O2 C7 127.0 117.0
C22 C21 H19 108.6 109.7
C22 C21 H20 108.6 109.5
N2 C6 O1 120.5 120.0
C6 N2 C19 119.2 120.9
O5 C33 H29 107.3 109.5
O5 C33 H30 107.3 109.5
N2 C19 C20 106.0 108.5
N2 C19 H15 110.3 109.6
N2 C19 H16 110.4 109.6
O2 C7 C8 111.9 120.0
O2 C7 C12 126.6 120.0
C20 C19 H15 110.3 109.6
C20 C19 H16 110.3 109.7
C19 C20 H17 109.5 109.5
C19 C20 H18 109.5 109.5
C21 N4 C23 121.3 111.0
C33 C32 H27 108.2 109.5
C33 C32 H28 108.2 109.5
C8 C7 C12 121.6 119.9
C7 C8 C9 118.0 119.9
C7 C8 H8 121.0 120.1
C7 C12 C11 119.1 119.9
C7 C12 H11 120.5 120.1
C8 C9 C10 121.3 120.1
C9 C8 H8 121.0 120.0
C8 C9 H9 119.4 120.0
N4 C20 H17 109.5 109.5
N4 C20 H18 109.5 109.5
N4 C23 C28 121.9 120.1
N4 C23 C24 118.7 120.0
C12 C11 H10 119.5 120.0
C9 C10 C35 119.7 119.9
C10 C9 H9 119.3 120.0
C24 C23 C28 119.2 119.9
C23 C28 C27 117.3 119.8
C23 C24 C25 121.5 119.9
C23 C24 H23 119.2 120.0
C11 C10 C35 121.3 120.0
C28 C27 H26 118.8 120.0
C24 C25 C26 120.8 120.1
C25 C24 H23 119.2 120.0
C24 C25 H24 119.6 119.9
C27 C26 H25 120.7 119.9
C26 C25 H24 119.6 120.0
C25 C26 H25 120.7 119.9
H1 C1 H2 109.5 109.5
H3 C2 H4 109.4 109.4
H5 C3 H6 109.5 109.6
H15 C19 H16 109.5 109.8
H17 C20 H18 109.5 109.6
H19 C21 H20 109.5 109.5
H21 C22 H22 109.5 109.7
H27 C32 H28 109.5 109.5
H29 C33 H30 109.5 109.5
H32 C37 H33 109.5 109.5
H34 C38 H35 109.5 109.4
H36 C39 H37 109.5 109.5
H36 C39 H38 109.5 109.4
H37 C39 H38 109.5 109.5

Torsion Angles for 62Q

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C16 N3 C15 H12 181.4 180.0
N3 C16 C17 C18 3.9 359.9
C17 C16 N3 H13 180.0 180.0
N3 C16 C17 H14 183.9 180.0
N3 C15 C14 C18 0.3 0.0
N3 C16 C17 H13 180.0 180.0
C14 C18 C17 C16 357.8 0.1
C16 C17 C18 C36 179.7 180.3
C18 C17 C16 H14 180.0 179.9
C39 C38 C37 H32 285.2 65.7
C39 C38 C37 H33 43.8 305.7
H34 C38 C39 H35 241.7 120.0
C15 C14 C18 C17 0.2 360.0
C15 C14 C18 C36 178.2 179.7
C38 C37 C4 H7 297.5 59.2
H32 C37 C38 H33 241.3 120.0
C18 C17 C16 H13 183.9 180.0
C16 C17 C18 H14 180.0 180.1
C14 C18 C17 C36 178.1 179.8
C16 C17 C18 C14 357.8 0.1
C17 C18 C14 C36 182.0 180.2
C14 C18 C17 H14 177.8 180.0
C14 C18 C36 C17 182.0 180.2
C36 C18 C17 H14 359.7 0.2
C13 N1 C3 H5 349.7 6.6
C13 N1 C3 H6 108.9 246.3
C13 N1 C4 H7 12.8 113.9
N1 C4 C37 H7 114.9 120.3
C5 C4 C37 H7 244.0 239.6
N1 C3 C2 H3 74.1 294.7
N1 C3 C2 H4 193.2 174.6
H5 C3 N1 H6 240.7 120.4
C37 C4 N1 H7 245.2 239.6
C4 N1 C3 H5 169.7 186.7
C4 N1 C3 H6 288.9 66.3
N1 C4 C5 C6 179.7 65.3
N1 C4 C5 O2 303.4 185.4
C5 C4 N1 H7 112.4 119.8
C3 C2 C1 H1 174.0 58.6
C3 C2 C1 H2 292.6 178.6
H3 C2 C3 H4 240.9 120.1
C37 C4 C5 H7 116.3 120.5
N1 C4 C5 H7 247.3 240.3
C4 C5 C1 H1 181.9 301.4
C4 C5 C1 H2 63.3 181.4
C6 C5 C4 O2 236.3 239.9
C4 C5 C6 N2 65.3 159.7
C4 C5 C6 O1 247.4 339.7
C4 C5 O2 C7 186.7 55.4
C5 C1 C2 H1 239.3 240.0
C5 C1 C2 H2 120.7 120.0
H1 C1 C2 H2 241.3 240.0
C2 C1 C5 H1 120.7 120.0
C2 C1 C5 H2 239.3 240.0
H1 C1 C5 H2 118.6 120.0
C4 C5 C6 O2 117.1 120.1
C6 C5 C4 H7 292.4 185.1
C6 C5 C1 H1 61.1 181.4
C6 C5 C1 H2 302.5 61.4
C6 C5 O2 C7 306.0 175.5
N2 C6 C5 O1 177.9 180.0
C5 C6 N2 C19 180.6 185.3
C4 C5 O2 C6 240.7 239.9
O2 C5 C4 H7 56.1 305.2
O2 C5 C1 H1 293.1 61.3
O2 C5 C1 H2 174.4 301.3
O2 C5 C6 N2 308.2 39.6
O2 C5 C6 O1 130.3 219.6
C5 O2 C7 C8 184.3 184.4
C5 O2 C7 C12 3.0 4.1
C22 N2 C19 H15 189.4 171.1
C22 N2 C19 H16 310.5 291.7
C22 C21 N4 C23 172.5 172.6
H19 C21 C22 H20 241.1 120.2
N2 C6 C5 O2 308.2 39.6
C5 C6 N2 O1 182.1 180.0
C6 N2 C19 C20 253.6 231.2
C6 N2 C19 H15 13.0 350.9
C6 N2 C19 H16 134.1 111.5
O1 C6 C5 O2 130.3 219.6
C5 C6 O1 N2 178.0 180.0
O1 C6 N2 C19 358.5 5.3
O5 C33 C32 H27 224.0 305.0
O5 C33 C32 H28 342.5 184.9
H29 C33 O5 H30 242.4 120.0
C19 N2 C6 O1 358.5 5.3
C20 C19 N2 H15 240.6 240.4
C20 C19 N2 H16 119.5 119.8
N2 C19 C20 H17 56.9 66.1
N2 C19 C20 H18 177.0 186.2
H15 C19 N2 H16 238.9 239.4
C8 C7 O2 C12 181.3 180.3
O2 C7 C8 C9 181.7 180.0
O2 C7 C8 H8 1.7 359.9
O2 C7 C12 C11 179.5 179.7
O2 C7 C12 H11 359.6 360.0
N2 C19 C20 H15 119.5 119.7
N2 C19 C20 H16 240.5 240.3
N4 C20 C19 H17 240.0 240.0
N4 C20 C19 H18 120.0 119.9
H15 C19 C20 H16 121.0 120.6
H17 C20 C19 H18 240.0 239.9
C21 N4 C20 H17 297.2 303.1
C21 N4 C20 H18 177.1 183.0
C21 N4 C23 C28 193.7 244.3
C21 N4 C23 C24 16.8 64.5
H27 C32 C33 H28 241.5 120.1
O2 C7 C8 C12 178.7 179.7
C8 C7 C12 C11 358.1 359.4
C8 C7 C12 H11 178.1 179.7
C7 C8 C9 C10 356.5 360.0
C9 C8 C7 H8 180.0 180.1
C7 C8 C9 H9 176.5 180.0
O2 C7 C12 C8 181.5 180.3
C12 C7 C8 C9 3.0 0.3
C12 C7 C8 H8 183.0 180.2
C7 C12 C11 H10 181.3 180.3
C9 C8 C7 C12 3.0 0.3
C7 C8 C9 H8 180.0 179.9
C8 C9 C10 C35 180.4 180.0
C10 C9 C8 H9 180.0 180.0
N4 C20 C19 H15 177.5 186.5
N4 C20 C19 H16 56.4 65.9
C19 C20 N4 H17 120.0 120.0
C19 C20 N4 H18 240.0 240.1
H17 C20 N4 H18 120.1 120.1
C23 N4 C20 H17 73.4 67.3
C23 N4 C20 H18 313.3 307.2
C24 C23 N4 C28 183.0 180.2
N4 C23 C28 C27 182.4 179.7
N4 C23 C24 C25 178.6 180.0
N4 C23 C24 H23 358.6 0.0
C7 C12 C11 H11 180.0 180.3
C12 C11 C10 C35 180.8 179.7
C10 C9 C8 H8 176.5 180.0
C8 C9 C10 H9 180.0 180.0
C11 C10 C9 C35 182.6 180.1
O4 C28 C27 H26 3.5 360.0
N4 C23 C28 C24 183.1 180.2
C28 C23 C24 C25 1.6 0.2
C28 C23 C24 H23 181.6 180.2
C23 C28 C27 H26 180.9 180.2
N4 C23 C24 C28 177.0 179.8
C24 C23 C28 C27 359.4 359.5
C23 C24 C25 C26 357.2 0.1
C25 C24 C23 H23 180.0 179.9
C23 C24 C25 H24 177.2 180.0
C7 C12 C11 C10 1.3 0.7
C9 C10 C11 C35 177.3 179.9
C11 C10 C9 H9 183.0 180.1
C28 C27 C26 H25 178.0 179.7
C25 C24 C23 C28 1.6 0.2
C23 C24 C25 H23 180.0 180.1
C26 C25 C24 H24 180.0 180.1
C24 C25 C26 H25 182.9 180.0
C35 C10 C9 H9 0.4 0.0
C23 C28 C27 C26 0.9 0.5
C27 C26 C25 H24 182.9 180.1
C25 C26 C27 H25 180.0 180.0
C26 C25 C24 H23 177.2 180.0
C24 C25 C26 H24 180.0 179.9
C27 C26 C25 H25 180.0 180.0
C2 C1 H1 H2 117.9 120.0
C5 C1 H1 H2 242.1 240.0
C2 C1 H2 H1 242.1 240.0
C5 C1 H2 H1 117.9 120.0
C3 C2 H3 H4 118.7 239.9
H3 C2 C1 H1 53.5 178.6
H3 C2 C1 H2 172.2 298.6
C3 C2 H4 H3 241.4 120.1
H4 C2 C1 H1 294.4 298.6
H4 C2 C1 H2 53.1 58.6
N1 C3 H5 H6 118.9 239.6
H5 C3 C2 H3 313.7 54.4
H5 C3 C2 H4 72.8 294.4
N1 C3 H6 H5 241.2 120.3
H6 C3 C2 H3 194.5 174.7
H6 C3 C2 H4 313.6 54.7
N1 C4 H7 C5 115.5 119.3
H7 C4 C5 C6 292.4 185.1
H7 C4 C5 O2 56.1 305.2
H8 C8 C7 C12 183.0 180.2
C7 C8 H8 C9 180.0 180.1
H8 C8 C9 C10 176.5 180.0
H8 C8 C9 H9 356.5 0.0
C8 C9 H9 C10 180.0 180.0
H9 C9 C8 H8 356.5 0.0
H9 C9 C10 C35 0.4 0.0
H10 C11 C10 C35 0.8 0.1
C7 C12 H11 C11 180.0 179.7
H11 C12 C11 H10 1.3 360.0
H12 C15 C14 C18 180.3 180.0
N3 C16 H13 C17 180.0 180.0
H13 C16 C17 C18 183.9 180.0
H13 C16 C17 H14 3.9 0.0
C16 C17 H14 C18 180.0 179.9
H14 C17 C16 H13 3.9 0.0
H14 C17 C18 C36 359.7 0.2
N2 C19 H15 C20 243.2 241.0
N2 C19 H15 H16 121.6 120.5
C20 C19 H15 H16 238.4 239.5
H15 C19 C20 H17 297.5 306.4
H15 C19 C20 H18 57.5 66.6
N2 C19 H16 C20 116.8 119.0
N2 C19 H16 H15 238.4 239.5
C20 C19 H16 H15 121.6 120.5
H16 C19 C20 H17 176.4 185.8
H16 C19 C20 H18 296.5 306.0
H17 C20 C19 H15 297.5 306.4
H17 C20 C19 H16 176.4 185.8
C19 C20 H17 H18 120.0 120.1
N4 C20 H17 H18 239.9 240.0
H18 C20 C19 H15 57.5 66.6
H18 C20 C19 H16 296.5 306.0
C19 C20 H18 H17 240.0 239.9
N4 C20 H18 H17 120.1 120.1
C22 C21 H19 H20 118.3 239.9
H19 C21 N4 C23 51.9 292.7
C22 C21 H20 H19 241.7 120.3
H20 C21 N4 C23 293.0 52.8
H21 C22 C21 H19 60.1 174.4
H21 C22 C21 H20 179.0 54.2
H22 C22 C21 H19 298.0 53.7
H22 C22 C21 H20 57.0 293.6
H23 C24 C23 C28 181.6 180.2
C23 C24 H23 C25 180.0 179.9
H23 C24 C25 C26 177.2 180.0
H23 C24 C25 H24 357.2 359.9
C24 C25 H24 C26 180.0 180.1
H24 C25 C24 H23 357.2 359.9
H24 C25 C26 H25 2.9 0.1
H25 C26 C25 H24 2.9 0.1
H26 C27 C26 H25 358.0 0.0
C33 C32 H27 H28 117.7 240.0
C33 C32 H28 H27 242.3 120.0
O5 C33 H29 H30 116.2 240.0
H29 C33 C32 H27 102.8 65.0
H29 C33 C32 H28 221.3 305.0
O5 C33 H30 H29 243.9 120.0
H30 C33 C32 H27 345.2 185.0
H30 C33 C32 H28 103.7 64.9
H31 O5 C33 H29 301.2 60.0
H31 O5 C33 H30 58.8 300.0
C38 C37 H32 H33 118.0 240.0
H32 C37 C4 H7 176.8 179.2
C38 C37 H33 H32 242.0 120.0
H33 C37 C4 H7 58.1 299.3
C39 C38 H34 H35 117.3 240.0
H34 C38 C37 H32 164.3 185.8
H34 C38 C37 H33 283.0 65.7
C39 C38 H35 H34 242.7 120.0
H35 C38 C37 H32 46.0 305.7
H35 C38 C37 H33 164.7 185.7
H36 C39 C38 H34 300.8 60.0
H36 C39 C38 H35 59.1 300.0
H37 C39 H36 H38 120.0 120.1
H37 C39 C38 H34 60.8 180.0
H37 C39 C38 H35 179.1 60.0
H36 C39 H37 H38 240.0 240.0
H38 C39 C38 H34 180.8 300.1
H38 C39 C38 H35 299.1 180.0
H36 C39 H38 H37 120.0 120.1