PDB Chemical Component 62P
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 62P
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C2 |
C3 |
1.480 |
1.404 |
C2 |
C1 |
1.342 |
1.366 |
C2 |
H2 |
1.080 |
1.080 |
C3 |
S8 |
1.770 |
1.762 |
C3 |
N4 |
1.260 |
1.304 |
S8 |
O19 |
1.455 |
1.421 |
S8 |
O18 |
1.442 |
1.421 |
S8 |
C9 |
1.788 |
1.762 |
C9 |
O13 |
1.343 |
1.345 |
C9 |
C10 |
1.331 |
1.340 |
O13 |
C12 |
1.384 |
1.348 |
C12 |
C17 |
1.405 |
1.390 |
C12 |
C11 |
1.370 |
1.405 |
C17 |
C16 |
1.403 |
1.379 |
C17 |
H17 |
1.079 |
1.079 |
C16 |
C15 |
1.398 |
1.387 |
C16 |
H16 |
1.080 |
1.081 |
C15 |
CL21 |
1.734 |
1.736 |
C15 |
C14 |
1.397 |
1.379 |
C14 |
C11 |
1.395 |
1.394 |
C14 |
H14 |
1.080 |
1.080 |
C11 |
C10 |
1.501 |
1.468 |
C10 |
C20 |
1.507 |
1.507 |
C20 |
H201 |
1.100 |
1.090 |
C20 |
H202 |
1.101 |
1.090 |
C20 |
H203 |
1.100 |
1.089 |
N4 |
N5 |
1.342 |
1.284 |
N5 |
C6 |
1.303 |
1.346 |
N5 |
HN5 |
1.000 |
0.971 |
C6 |
O7 |
1.225 |
1.221 |
C6 |
C1 |
1.479 |
1.412 |
C1 |
H1 |
1.080 |
1.081 |
Bond Angles for 62P
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C2 |
C1 |
116.7 |
118.3 |
C3 |
C2 |
H2 |
121.6 |
120.9 |
C2 |
C3 |
S8 |
117.8 |
119.8 |
C2 |
C3 |
N4 |
122.5 |
120.5 |
C1 |
C2 |
H2 |
121.6 |
120.8 |
C2 |
C1 |
C6 |
117.8 |
117.8 |
C2 |
C1 |
H1 |
121.1 |
121.1 |
S8 |
C3 |
N4 |
119.4 |
119.7 |
C3 |
S8 |
O19 |
105.6 |
105.8 |
C3 |
S8 |
O18 |
108.6 |
105.8 |
C3 |
S8 |
C9 |
101.6 |
107.4 |
C3 |
N4 |
N5 |
120.7 |
122.4 |
O19 |
S8 |
O18 |
126.7 |
125.3 |
O19 |
S8 |
C9 |
106.2 |
105.7 |
O18 |
S8 |
C9 |
105.5 |
105.8 |
S8 |
C9 |
O13 |
117.4 |
124.9 |
S8 |
C9 |
C10 |
125.0 |
124.9 |
O13 |
C9 |
C10 |
117.5 |
110.1 |
C9 |
O13 |
C12 |
102.5 |
110.9 |
C9 |
C10 |
C11 |
102.8 |
106.2 |
C9 |
C10 |
C20 |
130.6 |
126.9 |
O13 |
C12 |
C17 |
121.6 |
133.4 |
O13 |
C12 |
C11 |
113.3 |
107.3 |
C17 |
C12 |
C11 |
125.2 |
119.3 |
C12 |
C17 |
C16 |
114.7 |
119.9 |
C12 |
C17 |
H17 |
122.7 |
120.0 |
C12 |
C11 |
C14 |
121.5 |
120.2 |
C12 |
C11 |
C10 |
103.9 |
105.5 |
C16 |
C17 |
H17 |
122.7 |
120.1 |
C17 |
C16 |
C15 |
118.9 |
120.7 |
C17 |
C16 |
H16 |
120.5 |
119.6 |
C15 |
C16 |
H16 |
120.6 |
119.6 |
C16 |
C15 |
CL21 |
116.3 |
119.9 |
C16 |
C15 |
C14 |
126.5 |
120.2 |
CL21 |
C15 |
C14 |
117.2 |
119.9 |
C15 |
C14 |
C11 |
113.3 |
119.6 |
C15 |
C14 |
H14 |
123.3 |
120.2 |
C11 |
C14 |
H14 |
123.4 |
120.2 |
C14 |
C11 |
C10 |
134.6 |
134.3 |
C11 |
C10 |
C20 |
126.6 |
126.9 |
C10 |
C20 |
H201 |
109.5 |
109.5 |
C10 |
C20 |
H202 |
109.5 |
109.5 |
C10 |
C20 |
H203 |
109.5 |
109.5 |
H201 |
C20 |
H202 |
109.5 |
109.4 |
H201 |
C20 |
H203 |
109.5 |
109.5 |
H202 |
C20 |
H203 |
109.5 |
109.5 |
N4 |
N5 |
C6 |
123.2 |
121.7 |
N4 |
N5 |
HN5 |
118.4 |
119.1 |
C6 |
N5 |
HN5 |
118.4 |
119.2 |
N5 |
C6 |
O7 |
123.5 |
120.4 |
N5 |
C6 |
C1 |
119.1 |
119.3 |
O7 |
C6 |
C1 |
117.3 |
120.4 |
C6 |
C1 |
H1 |
121.1 |
121.1 |
Torsion Angles for 62P
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
H2 |
180.0 |
179.5 |
C3 |
C2 |
C1 |
C6 |
360.0 |
0.5 |
C3 |
C2 |
C1 |
H1 |
180.0 |
180.3 |
S8 |
C3 |
C2 |
N4 |
186.8 |
180.3 |
C2 |
C3 |
S8 |
O19 |
316.3 |
27.3 |
C2 |
C3 |
S8 |
O18 |
94.8 |
162.1 |
C2 |
C3 |
S8 |
C9 |
205.7 |
274.7 |
C2 |
C3 |
N4 |
N5 |
0.6 |
0.3 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.5 |
C1 |
C2 |
C3 |
S8 |
186.7 |
179.8 |
C1 |
C2 |
C3 |
N4 |
359.8 |
359.4 |
N5 |
C6 |
C1 |
C2 |
359.8 |
359.8 |
O7 |
C6 |
C1 |
C2 |
180.0 |
179.7 |
C6 |
C1 |
C2 |
H1 |
180.0 |
180.2 |
C3 |
C2 |
H2 |
C1 |
180.0 |
179.5 |
H2 |
C2 |
C3 |
S8 |
6.7 |
0.2 |
H2 |
C2 |
C3 |
N4 |
179.9 |
179.9 |
H2 |
C2 |
C1 |
C6 |
180.0 |
180.0 |
H2 |
C2 |
C1 |
H1 |
360.0 |
359.8 |
S8 |
C3 |
C2 |
C1 |
186.7 |
179.8 |
S8 |
C3 |
C2 |
H2 |
6.7 |
0.2 |
C2 |
C3 |
S8 |
N4 |
173.4 |
179.7 |
S8 |
C3 |
N4 |
N5 |
173.6 |
180.0 |
O19 |
S8 |
C3 |
O18 |
221.5 |
225.2 |
O19 |
S8 |
C3 |
C9 |
110.7 |
112.6 |
O18 |
S8 |
C3 |
C9 |
249.1 |
247.4 |
C3 |
S8 |
C9 |
O13 |
282.0 |
270.0 |
C3 |
S8 |
C9 |
C10 |
98.5 |
89.5 |
N4 |
C3 |
C2 |
C1 |
359.8 |
359.4 |
N4 |
C3 |
C2 |
H2 |
179.9 |
179.9 |
C2 |
C3 |
N4 |
S8 |
186.9 |
180.3 |
N4 |
C3 |
S8 |
O19 |
142.9 |
207.6 |
N4 |
C3 |
S8 |
O18 |
281.4 |
342.4 |
N4 |
C3 |
S8 |
C9 |
32.3 |
95.1 |
C3 |
N4 |
N5 |
C6 |
359.2 |
359.9 |
C3 |
N4 |
N5 |
HN5 |
179.2 |
180.0 |
O19 |
S8 |
C3 |
N4 |
142.9 |
207.6 |
C3 |
S8 |
O19 |
O18 |
128.3 |
123.1 |
C3 |
S8 |
O19 |
C9 |
252.7 |
246.3 |
O18 |
S8 |
O19 |
C9 |
124.3 |
123.1 |
O19 |
S8 |
C9 |
O13 |
171.8 |
157.4 |
O19 |
S8 |
C9 |
C10 |
348.3 |
336.9 |
O18 |
S8 |
C3 |
N4 |
281.4 |
342.4 |
C3 |
S8 |
O18 |
O19 |
232.8 |
236.9 |
C3 |
S8 |
O18 |
C9 |
108.2 |
113.7 |
O19 |
S8 |
O18 |
C9 |
235.4 |
236.9 |
O18 |
S8 |
C9 |
O13 |
35.2 |
22.6 |
O18 |
S8 |
C9 |
C10 |
211.7 |
202.1 |
C9 |
S8 |
C3 |
N4 |
32.3 |
95.1 |
C3 |
S8 |
C9 |
O19 |
110.2 |
112.6 |
C3 |
S8 |
C9 |
O18 |
246.8 |
247.4 |
O19 |
S8 |
C9 |
O18 |
136.6 |
134.8 |
O13 |
C9 |
S8 |
C10 |
183.5 |
180.5 |
S8 |
C9 |
O13 |
C12 |
176.8 |
180.0 |
S8 |
C9 |
C10 |
C11 |
183.3 |
180.0 |
S8 |
C9 |
C10 |
C20 |
3.6 |
0.2 |
S8 |
C9 |
O13 |
C10 |
176.8 |
179.6 |
O13 |
C9 |
C10 |
C11 |
359.8 |
359.6 |
O13 |
C9 |
C10 |
C20 |
180.1 |
179.8 |
C9 |
O13 |
C12 |
C17 |
179.9 |
179.7 |
C9 |
O13 |
C12 |
C11 |
0.2 |
359.7 |
S8 |
C9 |
C10 |
O13 |
183.5 |
180.4 |
C10 |
C9 |
O13 |
C12 |
360.0 |
0.4 |
C12 |
C11 |
C10 |
C9 |
0.3 |
0.2 |
C14 |
C11 |
C10 |
C9 |
180.0 |
180.3 |
C11 |
C10 |
C9 |
C20 |
179.8 |
179.8 |
C9 |
C10 |
C20 |
H201 |
11.3 |
269.7 |
C9 |
C10 |
C20 |
H202 |
251.3 |
29.7 |
C9 |
C10 |
C20 |
H203 |
131.3 |
149.7 |
C12 |
O13 |
C9 |
C10 |
360.0 |
0.4 |
C17 |
C12 |
O13 |
C11 |
179.7 |
180.0 |
O13 |
C12 |
C17 |
C16 |
180.0 |
180.0 |
O13 |
C12 |
C17 |
H17 |
360.0 |
0.0 |
O13 |
C12 |
C11 |
C14 |
179.9 |
180.0 |
O13 |
C12 |
C11 |
C10 |
359.7 |
0.0 |
O13 |
C12 |
C17 |
C11 |
180.3 |
180.0 |
C17 |
C12 |
C11 |
C14 |
0.2 |
360.0 |
C17 |
C12 |
C11 |
C10 |
180.0 |
180.0 |
C16 |
C17 |
C12 |
H17 |
180.0 |
180.0 |
C12 |
C17 |
C16 |
C15 |
0.2 |
0.0 |
C12 |
C17 |
C16 |
H16 |
180.2 |
180.0 |
C9 |
C10 |
C11 |
C12 |
0.3 |
0.2 |
O13 |
C12 |
C11 |
C17 |
179.7 |
180.0 |
C11 |
C12 |
C17 |
C16 |
359.6 |
0.0 |
C11 |
C12 |
C17 |
H17 |
179.6 |
180.0 |
C15 |
C14 |
C11 |
C12 |
0.1 |
0.0 |
C12 |
C11 |
C14 |
H14 |
180.1 |
180.0 |
C14 |
C11 |
C12 |
C10 |
180.2 |
179.9 |
C12 |
C11 |
C10 |
C20 |
180.0 |
180.0 |
C16 |
C17 |
C12 |
C11 |
359.6 |
0.0 |
C12 |
C17 |
C16 |
H17 |
180.0 |
180.0 |
C15 |
C16 |
C17 |
H16 |
180.0 |
180.0 |
C17 |
C16 |
C15 |
CL21 |
180.4 |
179.9 |
C17 |
C16 |
C15 |
C14 |
0.0 |
360.0 |
H17 |
C17 |
C12 |
C11 |
179.6 |
180.0 |
C12 |
C17 |
H17 |
C16 |
180.0 |
180.0 |
H17 |
C17 |
C16 |
C15 |
180.3 |
180.0 |
H17 |
C17 |
C16 |
H16 |
0.2 |
359.9 |
C15 |
C16 |
C17 |
H17 |
180.3 |
180.0 |
C17 |
C16 |
C15 |
H16 |
180.0 |
180.0 |
CL21 |
C15 |
C16 |
C14 |
180.3 |
180.0 |
C16 |
C15 |
C14 |
C11 |
359.8 |
360.0 |
C16 |
C15 |
C14 |
H14 |
179.8 |
180.0 |
H16 |
C16 |
C17 |
H17 |
0.2 |
359.9 |
C17 |
C16 |
H16 |
C15 |
180.0 |
180.0 |
H16 |
C16 |
C15 |
CL21 |
0.4 |
360.0 |
H16 |
C16 |
C15 |
C14 |
180.0 |
180.0 |
CL21 |
C15 |
C16 |
H16 |
0.4 |
360.0 |
C16 |
C15 |
CL21 |
C14 |
179.7 |
180.0 |
CL21 |
C15 |
C14 |
C11 |
179.5 |
180.0 |
CL21 |
C15 |
C14 |
H14 |
359.5 |
0.1 |
C12 |
C11 |
C14 |
C15 |
0.1 |
0.0 |
C14 |
C15 |
C16 |
H16 |
180.0 |
180.0 |
C16 |
C15 |
C14 |
CL21 |
180.3 |
180.0 |
C11 |
C14 |
C15 |
H14 |
180.0 |
180.0 |
C15 |
C14 |
C11 |
C10 |
180.3 |
179.9 |
C9 |
C10 |
C11 |
C14 |
180.0 |
180.3 |
C12 |
C11 |
C14 |
C10 |
179.7 |
180.1 |
C15 |
C14 |
C11 |
H14 |
180.0 |
180.0 |
C14 |
C11 |
C10 |
C20 |
359.8 |
0.1 |
C15 |
C14 |
H14 |
C11 |
180.0 |
180.0 |
H14 |
C14 |
C11 |
C10 |
0.4 |
359.9 |
C9 |
C10 |
C11 |
C20 |
180.2 |
180.2 |
C12 |
C11 |
C10 |
C14 |
180.2 |
179.9 |
C10 |
C11 |
C14 |
H14 |
0.4 |
359.9 |
C11 |
C10 |
C20 |
H201 |
191.6 |
90.0 |
C11 |
C10 |
C20 |
H202 |
71.6 |
210.0 |
C11 |
C10 |
C20 |
H203 |
311.6 |
330.0 |
C9 |
C10 |
C20 |
C11 |
179.7 |
179.7 |
H201 |
C20 |
C10 |
H202 |
120.0 |
240.0 |
H201 |
C20 |
C10 |
H203 |
240.0 |
120.0 |
H202 |
C20 |
C10 |
H203 |
120.0 |
240.0 |
C10 |
C20 |
H201 |
H202 |
240.0 |
120.0 |
C10 |
C20 |
H201 |
H203 |
120.0 |
240.0 |
H202 |
C20 |
H201 |
H203 |
240.0 |
120.0 |
C10 |
C20 |
H202 |
H201 |
120.0 |
240.0 |
C10 |
C20 |
H202 |
H203 |
240.0 |
120.0 |
H201 |
C20 |
H202 |
H203 |
120.0 |
240.0 |
C10 |
C20 |
H203 |
H201 |
240.0 |
120.0 |
C10 |
C20 |
H203 |
H202 |
120.0 |
240.0 |
H201 |
C20 |
H203 |
H202 |
240.0 |
120.0 |
C6 |
N5 |
N4 |
HN5 |
180.0 |
180.0 |
N4 |
N5 |
C6 |
O7 |
180.4 |
180.1 |
N4 |
N5 |
C6 |
C1 |
0.7 |
360.0 |
C2 |
C1 |
C6 |
N5 |
359.8 |
359.8 |
N4 |
N5 |
C6 |
HN5 |
180.0 |
180.0 |
O7 |
C6 |
N5 |
C1 |
179.7 |
180.1 |
N5 |
C6 |
C1 |
H1 |
179.7 |
180.0 |
N4 |
N5 |
HN5 |
C6 |
180.0 |
180.0 |
HN5 |
N5 |
C6 |
O7 |
0.4 |
0.0 |
HN5 |
N5 |
C6 |
C1 |
180.7 |
179.9 |
C2 |
C1 |
C6 |
O7 |
180.0 |
179.7 |
O7 |
C6 |
N5 |
HN5 |
0.4 |
0.0 |
N5 |
C6 |
O7 |
C1 |
180.3 |
179.9 |
O7 |
C6 |
C1 |
H1 |
0.0 |
359.9 |
C6 |
C1 |
C2 |
H2 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
H1 |
180.0 |
179.8 |
C1 |
C6 |
N5 |
HN5 |
180.7 |
179.9 |
N5 |
C6 |
C1 |
O7 |
179.7 |
180.1 |
H1 |
C1 |
C2 |
H2 |
360.0 |
359.8 |
C2 |
C1 |
H1 |
C6 |
180.0 |
180.2 |