PDB Chemical Component 62P

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 62P

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C3 1.480 1.404
C2 C1 1.342 1.366
C2 H2 1.080 1.080
C3 S8 1.770 1.762
C3 N4 1.260 1.304
S8 O19 1.455 1.421
S8 O18 1.442 1.421
S8 C9 1.788 1.762
C9 O13 1.343 1.345
C9 C10 1.331 1.340
O13 C12 1.384 1.348
C12 C17 1.405 1.390
C12 C11 1.370 1.405
C17 C16 1.403 1.379
C17 H17 1.079 1.079
C16 C15 1.398 1.387
C16 H16 1.080 1.081
C15 CL21 1.734 1.736
C15 C14 1.397 1.379
C14 C11 1.395 1.394
C14 H14 1.080 1.080
C11 C10 1.501 1.468
C10 C20 1.507 1.507
C20 H201 1.100 1.090
C20 H202 1.101 1.090
C20 H203 1.100 1.089
N4 N5 1.342 1.284
N5 C6 1.303 1.346
N5 HN5 1.000 0.971
C6 O7 1.225 1.221
C6 C1 1.479 1.412
C1 H1 1.080 1.081

Bond Angles for 62P

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C3 C2 C1 116.7 118.3
C3 C2 H2 121.6 120.9
C2 C3 S8 117.8 119.8
C2 C3 N4 122.5 120.5
C1 C2 H2 121.6 120.8
C2 C1 C6 117.8 117.8
C2 C1 H1 121.1 121.1
S8 C3 N4 119.4 119.7
C3 S8 O19 105.6 105.8
C3 S8 O18 108.6 105.8
C3 S8 C9 101.6 107.4
C3 N4 N5 120.7 122.4
O19 S8 O18 126.7 125.3
O19 S8 C9 106.2 105.7
O18 S8 C9 105.5 105.8
S8 C9 O13 117.4 124.9
S8 C9 C10 125.0 124.9
O13 C9 C10 117.5 110.1
C9 O13 C12 102.5 110.9
C9 C10 C11 102.8 106.2
C9 C10 C20 130.6 126.9
O13 C12 C17 121.6 133.4
O13 C12 C11 113.3 107.3
C17 C12 C11 125.2 119.3
C12 C17 C16 114.7 119.9
C12 C17 H17 122.7 120.0
C12 C11 C14 121.5 120.2
C12 C11 C10 103.9 105.5
C16 C17 H17 122.7 120.1
C17 C16 C15 118.9 120.7
C17 C16 H16 120.5 119.6
C15 C16 H16 120.6 119.6
C16 C15 CL21 116.3 119.9
C16 C15 C14 126.5 120.2
CL21 C15 C14 117.2 119.9
C15 C14 C11 113.3 119.6
C15 C14 H14 123.3 120.2
C11 C14 H14 123.4 120.2
C14 C11 C10 134.6 134.3
C11 C10 C20 126.6 126.9
C10 C20 H201 109.5 109.5
C10 C20 H202 109.5 109.5
C10 C20 H203 109.5 109.5
H201 C20 H202 109.5 109.4
H201 C20 H203 109.5 109.5
H202 C20 H203 109.5 109.5
N4 N5 C6 123.2 121.7
N4 N5 HN5 118.4 119.1
C6 N5 HN5 118.4 119.2
N5 C6 O7 123.5 120.4
N5 C6 C1 119.1 119.3
O7 C6 C1 117.3 120.4
C6 C1 H1 121.1 121.1

Torsion Angles for 62P

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C1 C2 C3 H2 180.0 179.5
C3 C2 C1 C6 360.0 0.5
C3 C2 C1 H1 180.0 180.3
S8 C3 C2 N4 186.8 180.3
C2 C3 S8 O19 316.3 27.3
C2 C3 S8 O18 94.8 162.1
C2 C3 S8 C9 205.7 274.7
C2 C3 N4 N5 0.6 0.3
C3 C2 C1 H2 180.0 180.5
C1 C2 C3 S8 186.7 179.8
C1 C2 C3 N4 359.8 359.4
N5 C6 C1 C2 359.8 359.8
O7 C6 C1 C2 180.0 179.7
C6 C1 C2 H1 180.0 180.2
C3 C2 H2 C1 180.0 179.5
H2 C2 C3 S8 6.7 0.2
H2 C2 C3 N4 179.9 179.9
H2 C2 C1 C6 180.0 180.0
H2 C2 C1 H1 360.0 359.8
S8 C3 C2 C1 186.7 179.8
S8 C3 C2 H2 6.7 0.2
C2 C3 S8 N4 173.4 179.7
S8 C3 N4 N5 173.6 180.0
O19 S8 C3 O18 221.5 225.2
O19 S8 C3 C9 110.7 112.6
O18 S8 C3 C9 249.1 247.4
C3 S8 C9 O13 282.0 270.0
C3 S8 C9 C10 98.5 89.5
N4 C3 C2 C1 359.8 359.4
N4 C3 C2 H2 179.9 179.9
C2 C3 N4 S8 186.9 180.3
N4 C3 S8 O19 142.9 207.6
N4 C3 S8 O18 281.4 342.4
N4 C3 S8 C9 32.3 95.1
C3 N4 N5 C6 359.2 359.9
C3 N4 N5 HN5 179.2 180.0
O19 S8 C3 N4 142.9 207.6
C3 S8 O19 O18 128.3 123.1
C3 S8 O19 C9 252.7 246.3
O18 S8 O19 C9 124.3 123.1
O19 S8 C9 O13 171.8 157.4
O19 S8 C9 C10 348.3 336.9
O18 S8 C3 N4 281.4 342.4
C3 S8 O18 O19 232.8 236.9
C3 S8 O18 C9 108.2 113.7
O19 S8 O18 C9 235.4 236.9
O18 S8 C9 O13 35.2 22.6
O18 S8 C9 C10 211.7 202.1
C9 S8 C3 N4 32.3 95.1
C3 S8 C9 O19 110.2 112.6
C3 S8 C9 O18 246.8 247.4
O19 S8 C9 O18 136.6 134.8
O13 C9 S8 C10 183.5 180.5
S8 C9 O13 C12 176.8 180.0
S8 C9 C10 C11 183.3 180.0
S8 C9 C10 C20 3.6 0.2
S8 C9 O13 C10 176.8 179.6
O13 C9 C10 C11 359.8 359.6
O13 C9 C10 C20 180.1 179.8
C9 O13 C12 C17 179.9 179.7
C9 O13 C12 C11 0.2 359.7
S8 C9 C10 O13 183.5 180.4
C10 C9 O13 C12 360.0 0.4
C12 C11 C10 C9 0.3 0.2
C14 C11 C10 C9 180.0 180.3
C11 C10 C9 C20 179.8 179.8
C9 C10 C20 H201 11.3 269.7
C9 C10 C20 H202 251.3 29.7
C9 C10 C20 H203 131.3 149.7
C12 O13 C9 C10 360.0 0.4
C17 C12 O13 C11 179.7 180.0
O13 C12 C17 C16 180.0 180.0
O13 C12 C17 H17 360.0 0.0
O13 C12 C11 C14 179.9 180.0
O13 C12 C11 C10 359.7 0.0
O13 C12 C17 C11 180.3 180.0
C17 C12 C11 C14 0.2 360.0
C17 C12 C11 C10 180.0 180.0
C16 C17 C12 H17 180.0 180.0
C12 C17 C16 C15 0.2 0.0
C12 C17 C16 H16 180.2 180.0
C9 C10 C11 C12 0.3 0.2
O13 C12 C11 C17 179.7 180.0
C11 C12 C17 C16 359.6 0.0
C11 C12 C17 H17 179.6 180.0
C15 C14 C11 C12 0.1 0.0
C12 C11 C14 H14 180.1 180.0
C14 C11 C12 C10 180.2 179.9
C12 C11 C10 C20 180.0 180.0
C16 C17 C12 C11 359.6 0.0
C12 C17 C16 H17 180.0 180.0
C15 C16 C17 H16 180.0 180.0
C17 C16 C15 CL21 180.4 179.9
C17 C16 C15 C14 0.0 360.0
H17 C17 C12 C11 179.6 180.0
C12 C17 H17 C16 180.0 180.0
H17 C17 C16 C15 180.3 180.0
H17 C17 C16 H16 0.2 359.9
C15 C16 C17 H17 180.3 180.0
C17 C16 C15 H16 180.0 180.0
CL21 C15 C16 C14 180.3 180.0
C16 C15 C14 C11 359.8 360.0
C16 C15 C14 H14 179.8 180.0
H16 C16 C17 H17 0.2 359.9
C17 C16 H16 C15 180.0 180.0
H16 C16 C15 CL21 0.4 360.0
H16 C16 C15 C14 180.0 180.0
CL21 C15 C16 H16 0.4 360.0
C16 C15 CL21 C14 179.7 180.0
CL21 C15 C14 C11 179.5 180.0
CL21 C15 C14 H14 359.5 0.1
C12 C11 C14 C15 0.1 0.0
C14 C15 C16 H16 180.0 180.0
C16 C15 C14 CL21 180.3 180.0
C11 C14 C15 H14 180.0 180.0
C15 C14 C11 C10 180.3 179.9
C9 C10 C11 C14 180.0 180.3
C12 C11 C14 C10 179.7 180.1
C15 C14 C11 H14 180.0 180.0
C14 C11 C10 C20 359.8 0.1
C15 C14 H14 C11 180.0 180.0
H14 C14 C11 C10 0.4 359.9
C9 C10 C11 C20 180.2 180.2
C12 C11 C10 C14 180.2 179.9
C10 C11 C14 H14 0.4 359.9
C11 C10 C20 H201 191.6 90.0
C11 C10 C20 H202 71.6 210.0
C11 C10 C20 H203 311.6 330.0
C9 C10 C20 C11 179.7 179.7
H201 C20 C10 H202 120.0 240.0
H201 C20 C10 H203 240.0 120.0
H202 C20 C10 H203 120.0 240.0
C10 C20 H201 H202 240.0 120.0
C10 C20 H201 H203 120.0 240.0
H202 C20 H201 H203 240.0 120.0
C10 C20 H202 H201 120.0 240.0
C10 C20 H202 H203 240.0 120.0
H201 C20 H202 H203 120.0 240.0
C10 C20 H203 H201 240.0 120.0
C10 C20 H203 H202 120.0 240.0
H201 C20 H203 H202 240.0 120.0
C6 N5 N4 HN5 180.0 180.0
N4 N5 C6 O7 180.4 180.1
N4 N5 C6 C1 0.7 360.0
C2 C1 C6 N5 359.8 359.8
N4 N5 C6 HN5 180.0 180.0
O7 C6 N5 C1 179.7 180.1
N5 C6 C1 H1 179.7 180.0
N4 N5 HN5 C6 180.0 180.0
HN5 N5 C6 O7 0.4 0.0
HN5 N5 C6 C1 180.7 179.9
C2 C1 C6 O7 180.0 179.7
O7 C6 N5 HN5 0.4 0.0
N5 C6 O7 C1 180.3 179.9
O7 C6 C1 H1 0.0 359.9
C6 C1 C2 H2 180.0 180.0
C2 C1 C6 H1 180.0 179.8
C1 C6 N5 HN5 180.7 179.9
N5 C6 C1 O7 179.7 180.1
H1 C1 C2 H2 360.0 359.8
C2 C1 H1 C6 180.0 180.2