PDB Chemical Component 628

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 628

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.415	1.377
C1	C6	1.442	1.418
C1	C23	1.493	1.474
C2	N3	1.320	1.358
C2	H2	1.080	1.080
N3	C4	1.362	1.372
N3	C10	1.335	1.373
C4	C5	1.427	1.411
C4	N12	1.377	1.326
C5	C6	1.433	1.356
C5	H5	1.080	1.081
C6	H6	1.080	1.079
C10	C11	1.413	1.357
C10	H10	1.080	1.080
C11	N12	1.373	1.338
C11	N35	1.471	1.401
S1	C14	1.752	1.762
S1	O34	1.440	1.421
S1	N1	1.633	1.656
S1	O1	1.442	1.421
C14	C15	1.432	1.383
C14	C19	1.431	1.383
C15	C16	1.399	1.382
C15	H15	1.080	1.080
C16	C17	1.425	1.389
C16	H16	1.080	1.081
C17	C18	1.455	1.389
C17	N35	1.445	1.397
C18	C19	1.422	1.382
C18	H18	1.080	1.080
C19	H19	1.080	1.080
C23	C24	1.526	1.476
C23	O33	1.233	1.216
C24	C25	1.486	1.398
C24	C29	1.471	1.399
C25	C26	1.408	1.380
C25	CL2	1.370	1.736
C26	C27	1.414	1.383
C26	H26	1.080	1.080
C27	C28	1.424	1.384
C27	H27	1.080	1.079
C28	C29	1.426	1.380
C28	H28	1.080	1.080
C29	CL1	1.372	1.736
N35	H35	1.000	0.969
N1	HN11	1.000	0.971
N1	HN12	1.000	0.970

Bond Angles for 628

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	118.3	119.8
C2	C1	C23	119.7	120.1
C1	C2	N3	120.8	120.4
C1	C2	H2	119.6	119.8
C6	C1	C23	122.1	120.1
C1	C6	C5	120.4	119.5
C1	C6	H6	119.8	120.2
C1	C23	C24	119.0	120.0
C1	C23	O33	121.9	120.0
N3	C2	H2	119.6	119.8
C2	N3	C4	122.7	120.6
C2	N3	C10	125.0	132.3
C4	N3	C10	112.3	107.1
N3	C4	C5	122.1	120.0
N3	C4	N12	109.6	108.1
N3	C10	C11	102.0	107.0
N3	C10	H10	129.0	126.5
C5	C4	N12	128.4	131.9
C4	C5	C6	115.8	119.7
C4	C5	H5	122.1	120.2
C4	N12	C11	102.7	109.3
C6	C5	H5	122.1	120.1
C5	C6	H6	119.8	120.3
C11	C10	H10	129.0	126.5
C10	C11	N12	113.5	108.5
C10	C11	N35	114.8	125.7
N12	C11	N35	131.7	125.8
C11	N35	C17	125.8	120.0
C11	N35	H35	117.1	120.0
C14	S1	O34	106.1	105.8
C14	S1	N1	110.1	107.4
C14	S1	O1	109.0	105.8
S1	C14	C15	117.8	119.9
S1	C14	C19	120.1	119.9
O34	S1	N1	107.2	105.8
O34	S1	O1	118.3	125.4
N1	S1	O1	106.0	105.7
S1	N1	HN11	109.5	120.0
S1	N1	HN12	109.5	120.0
C15	C14	C19	122.1	120.2
C14	C15	C16	119.8	120.1
C14	C15	H15	120.1	120.0
C14	C19	C18	118.0	120.1
C14	C19	H19	121.0	120.0
C16	C15	H15	120.1	119.9
C15	C16	C17	119.6	119.9
C15	C16	H16	120.2	120.0
C17	C16	H16	120.2	120.1
C16	C17	C18	120.7	119.8
C16	C17	N35	114.3	120.1
C18	C17	N35	125.0	120.1
C17	C18	C19	119.8	119.9
C17	C18	H18	120.1	120.0
C17	N35	H35	117.1	120.0
C19	C18	H18	120.1	120.0
C18	C19	H19	121.0	119.9
C24	C23	O33	119.1	120.0
C23	C24	C25	122.3	120.2
C23	C24	C29	121.0	120.2
C25	C24	C29	116.7	119.6
C24	C25	C26	120.7	119.8
C24	C25	CL2	121.6	120.0
C24	C29	C28	120.6	119.8
C24	C29	CL1	120.5	120.1
C26	C25	CL2	117.7	120.1
C25	C26	C27	120.8	120.2
C25	C26	H26	119.6	119.9
C27	C26	H26	119.6	119.9
C26	C27	C28	120.8	120.3
C26	C27	H27	119.6	119.8
C28	C27	H27	119.6	119.8
C27	C28	C29	120.3	120.2
C27	C28	H28	119.8	119.9
C29	C28	H28	119.9	119.9
C28	C29	CL1	118.9	120.1
HN11	N1	HN12	109.5	120.0

Torsion Angles for 628

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C1	C2	C23	180.0	179.9
C2	C1	C6	C5	358.7	0.1
C2	C1	C6	H6	178.7	180.0
C2	C1	C23	C24	9.4	183.2
C2	C1	C23	O33	187.4	3.3
N3	C2	C1	H2	180.0	179.9
C1	C2	N3	C4	358.6	0.1
C1	C2	N3	C10	180.3	180.1
C2	C1	C6	C23	180.1	180.1
C6	C1	C2	N3	1.5	359.9
C6	C1	C2	H2	181.5	180.0
C6	C1	C23	C24	189.5	3.3
C6	C1	C23	O33	7.4	183.3
C4	C5	C6	C1	0.8	360.0
C1	C6	C5	H5	180.8	179.9
C5	C6	C1	H6	180.0	180.0
C2	C1	C23	C6	179.9	179.9
C23	C1	C2	N3	181.6	180.0
C23	C1	C2	H2	1.6	0.1
C23	C1	C6	C5	178.7	180.0
C23	C1	C6	H6	358.7	360.0
C24	C23	C1	O33	182.0	180.0
C1	C23	C24	C25	69.0	266.1
C1	C23	C24	C29	250.4	86.4
N3	C2	C1	C6	1.5	359.9
N3	C2	C1	C23	181.6	180.0
C1	C2	N3	H2	180.0	180.1
C4	N3	C2	C10	178.3	180.0
C2	N3	C4	C5	1.0	360.0
C2	N3	C4	N12	179.7	179.7
C2	N3	C10	C11	179.9	180.0
C2	N3	C10	H10	359.9	360.0
H2	C2	C1	C6	181.5	180.0
H2	C2	C1	C23	1.6	0.1
C1	C2	H2	N3	180.0	179.9
H2	C2	N3	C4	178.6	180.0
H2	C2	N3	C10	0.3	360.0
C4	N3	C2	H2	178.6	180.0
C2	N3	C4	C10	181.5	180.0
C4	N3	C10	C11	1.5	0.0
C4	N3	C10	H10	181.5	180.0
C5	C4	N3	N12	181.3	180.2
N3	C4	C5	C6	359.3	360.0
N3	C4	C5	H5	179.3	180.1
N3	C4	N12	C11	1.2	0.4
C10	N3	C2	H2	0.3	360.0
C2	N3	C10	C4	178.4	180.0
C10	N3	C4	C5	179.5	180.0
C10	N3	C4	N12	358.2	359.7
C11	C10	N3	H10	180.0	180.0
N3	C10	C11	N12	359.3	0.2
N3	C10	C11	N35	179.3	180.0
C1	C6	C5	C4	0.8	360.0
C5	C4	N3	C10	179.5	180.0
N3	C4	C5	N12	178.4	179.7
C5	C4	N12	C11	179.8	180.1
C6	C5	C4	H5	180.0	179.9
C4	C5	C6	H6	180.9	180.0
N12	C4	N3	C10	358.2	359.7
N3	C4	N12	C5	181.4	180.3
N12	C4	C5	C6	180.9	180.3
N12	C4	C5	H5	0.9	0.4
C10	C11	N12	C4	359.7	359.6
C4	N12	C11	N35	179.7	179.9
C5	C6	C1	C23	178.7	180.0
C1	C6	C5	H6	180.0	180.0
C6	C5	C4	N12	180.9	180.3
C4	C5	C6	H5	180.0	180.1
H5	C5	C4	N12	0.9	0.4
C4	C5	H5	C6	180.0	179.9
H5	C5	C6	H6	0.8	360.0
H6	C6	C1	C23	358.7	360.0
C1	C6	H6	C5	180.0	180.0
H6	C6	C5	H5	0.8	360.0
N3	C10	C11	H10	180.0	180.0
C4	N12	C11	C10	359.7	359.6
N12	C11	C10	N35	180.0	180.2
C10	C11	N35	C17	303.2	174.4
C10	C11	N35	H35	123.2	354.4
N3	C10	H10	C11	180.0	180.0
H10	C10	C11	N12	179.3	180.2
H10	C10	C11	N35	359.3	360.0
N12	C11	C10	H10	179.3	180.2
C10	C11	N12	N35	180.0	179.8
N12	C11	N35	C17	123.3	354.1
N12	C11	N35	H35	303.2	174.1
N35	C11	C10	H10	359.3	360.0
C10	C11	N35	N12	180.0	180.3
C16	C17	N35	C11	185.6	330.1
C18	C17	N35	C11	6.2	150.1
C17	N35	C11	H35	180.0	180.0
O34	S1	C14	N1	115.7	247.4
O34	S1	C14	O1	231.6	134.8
N1	S1	C14	O1	115.8	247.4
C14	S1	N1	HN11	214.1	240.0
C14	S1	N1	HN12	94.0	59.7
C15	C14	S1	C19	180.0	179.7
S1	C14	C15	C16	180.0	179.7
S1	C14	C15	H15	0.0	0.3
S1	C14	C19	C18	180.0	180.0
S1	C14	C19	H19	360.0	360.0
C14	S1	O34	N1	242.4	113.7
C14	S1	O34	O1	122.7	236.9
O34	S1	C14	C15	357.2	157.1
O34	S1	C14	C19	177.2	337.4
N1	S1	O34	O1	240.4	123.1
O34	S1	N1	HN11	99.1	352.6
O34	S1	N1	HN12	339.0	172.3
C14	S1	N1	O34	115.0	247.4
C14	S1	N1	O1	242.3	112.6
N1	S1	C14	C15	241.5	269.7
N1	S1	C14	C19	61.5	90.0
O34	S1	N1	O1	127.3	225.2
HN11	N1	S1	HN12	120.0	180.4
C14	S1	O1	O34	238.7	123.1
C14	S1	O1	N1	118.5	246.3
O1	S1	C14	C15	125.6	22.3
O1	S1	C14	C19	305.7	202.6
O34	S1	O1	N1	239.7	123.1
O1	S1	N1	HN11	331.8	127.4
O1	S1	N1	HN12	211.8	307.1
C15	C14	S1	O34	357.2	157.1
C15	C14	S1	N1	241.5	269.7
C15	C14	S1	O1	125.6	22.3
S1	C14	C15	C19	180.0	180.3
C15	C14	C19	C18	0.0	0.3
C15	C14	C19	H19	180.0	180.2
C16	C15	C14	H15	180.0	179.4
C14	C15	C16	C17	359.9	0.6
C14	C15	C16	H16	179.9	180.2
C19	C14	S1	O34	177.2	337.4
C19	C14	S1	N1	61.5	90.0
C19	C14	S1	O1	305.7	202.6
S1	C14	C19	C15	180.0	179.7
C19	C14	C15	C16	0.0	359.5
C19	C14	C15	H15	180.0	180.0
C17	C18	C19	C14	0.0	360.0
C14	C19	C18	H18	180.1	180.0
C18	C19	C14	H19	180.0	180.0
C16	C15	C14	C19	0.0	359.5
C14	C15	C16	H15	180.0	180.6
C17	C16	C15	H16	180.0	180.3
C15	C16	C17	C18	0.2	359.7
C15	C16	C17	N35	180.7	179.7
H15	C15	C14	C19	180.0	180.0
C14	C15	H15	C16	180.0	179.4
H15	C15	C16	C17	179.9	180.0
H15	C15	C16	H16	359.9	359.7
C11	N35	C17	C16	185.6	330.1
C17	C16	C15	H15	179.9	180.0
C15	C16	C17	H16	180.0	179.7
C18	C17	C16	N35	179.5	180.0
C16	C17	C18	C19	359.9	0.0
C16	C17	C18	H18	179.9	180.0
C16	C17	N35	H35	5.7	150.1
H16	C16	C15	H15	359.9	359.7
C15	C16	H16	C17	180.0	180.3
H16	C16	C17	C18	180.2	180.0
H16	C16	C17	N35	0.7	0.0
C11	N35	C17	C18	6.2	150.1
C14	C19	C18	C17	0.0	360.0
C18	C17	C16	H16	180.2	180.0
C16	C17	C18	N35	180.6	180.0
C18	C17	N35	H35	186.2	330.1
C19	C18	C17	H18	180.0	180.0
C17	C18	C19	H19	180.1	180.0
C11	N35	C17	H35	180.0	180.0
N35	C17	C16	H16	0.7	0.0
C16	C17	N35	C18	179.5	180.0
N35	C17	C18	C19	179.3	180.0
N35	C17	C18	H18	359.3	360.0
C14	C19	C18	H19	180.0	180.0
C19	C18	C17	N35	179.3	180.0
C17	C18	C19	H18	180.0	180.0
H18	C18	C17	N35	359.3	360.0
C17	C18	H18	C19	180.0	180.0
H18	C18	C19	H19	0.1	0.1
C14	C19	H19	C18	180.0	180.0
H19	C19	C18	H18	0.1	0.1
C1	C23	C24	O33	178.0	180.0
C25	C24	C23	C29	178.6	179.7
C23	C24	C25	C26	179.5	179.7
C23	C24	C25	CL2	0.9	0.3
C23	C24	C29	C28	180.6	180.0
C23	C24	C29	CL1	359.0	360.0
C1	C23	O33	C24	182.0	180.0
O33	C23	C24	C25	250.9	86.0
O33	C23	C24	C29	72.4	266.4
C25	C24	C23	O33	250.9	86.0
C23	C24	C25	C29	181.4	180.3
C25	C24	C29	C28	1.9	0.3
C25	C24	C29	CL1	180.4	180.3
C26	C25	C24	CL2	178.6	179.4
C24	C25	C26	C27	1.5	0.6
C24	C25	C26	H26	181.5	180.3
C29	C24	C23	O33	72.4	266.4
C23	C24	C29	C25	178.6	179.7
C29	C24	C25	C26	358.1	359.4
C29	C24	C25	CL2	179.5	180.0
C27	C28	C29	C24	358.4	0.0
C24	C29	C28	H28	178.4	180.0
C28	C29	C24	CL1	181.6	180.0
C26	C25	C24	C29	358.1	359.4
C24	C25	C26	CL2	181.3	180.6
C27	C26	C25	H26	180.0	180.4
C25	C26	C27	C28	359.0	359.7
C25	C26	C27	H27	178.9	179.7
CL2	C25	C24	C29	179.5	180.0
C24	C25	CL2	C26	178.6	179.4
CL2	C25	C26	C27	180.1	180.1
CL2	C25	C26	H26	0.1	359.7
C27	C26	C25	CL2	180.1	180.1
C25	C26	C27	H26	180.0	179.6
C28	C27	C26	H27	180.0	179.9
C26	C27	C28	C29	1.1	360.0
C26	C27	C28	H28	181.1	180.1
H26	C26	C25	CL2	0.1	359.7
C25	C26	H26	C27	180.0	180.4
H26	C26	C27	C28	179.0	180.0
H26	C26	C27	H27	358.9	0.1
C24	C29	C28	C27	358.4	0.0
C28	C27	C26	H26	179.0	180.0
C26	C27	C28	H27	180.0	180.1
C29	C28	C27	H28	180.0	179.9
C27	C28	C29	CL1	180.0	180.0
H27	C27	C26	H26	358.9	0.1
C26	C27	H27	C28	180.0	179.9
H27	C27	C28	C29	181.1	179.9
H27	C27	C28	H28	1.1	360.0
C24	C29	C28	CL1	178.5	180.0
C29	C28	C27	H27	181.1	179.9
C27	C28	C29	H28	180.0	180.1
H28	C28	C27	H27	1.1	360.0
C27	C28	H28	C29	180.0	179.9
H28	C28	C29	CL1	359.9	359.9
C24	C29	CL1	C28	181.5	180.0
CL1	C29	C28	H28	359.9	359.9
C11	N35	H35	C17	180.0	180.0
HN11	N1	S1	O1	331.8	127.4
S1	N1	HN11	HN12	239.9	179.6
HN12	N1	S1	O1	211.8	307.1
S1	N1	HN12	HN11	120.0	180.4