PDB Chemical Component 625

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 625

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	N1	1.165	1.136
C1	C23	1.475	1.472
O1	C17	1.377	1.359
O1	C26	1.432	1.429
CL1	C18	1.734	1.735
C2	C3	1.396	1.383
C2	C5	1.394	1.380
N2	C21	1.351	1.319
N2	C22	1.349	1.324
C3	C10	1.394	1.383
N3	C19	1.397	1.371
N3	C20	1.387	1.373
N3	C24	1.457	1.465
C4	C13	1.388	1.388
C4	C14	1.392	1.383
N4	C22	1.385	1.391
C5	C16	1.404	1.395
C6	C8	1.397	1.379
C6	C15	1.401	1.396
C7	C9	1.402	1.379
C7	C15	1.403	1.396
C8	C17	1.400	1.388
C9	C17	1.399	1.388
C10	C18	1.401	1.381
C11	C12	1.413	1.399
C11	C19	1.386	1.364
C12	C20	1.382	1.364
C13	C21	1.390	1.381
C14	C22	1.393	1.391
C15	C19	1.471	1.478
C16	C18	1.413	1.398
C16	C20	1.466	1.477
C21	C24	1.499	1.507
C23	C25	1.526	1.530
C25	C26	1.527	1.530
C2	H2	1.080	1.080
C3	H3	1.080	1.081
C4	H4	1.080	1.080
N4	HN4	1.000	0.970
N4	HN4A	1.000	0.970
C5	H5	1.080	1.080
C6	H6	1.080	1.081
C7	H7	1.080	1.080
C8	H8	1.081	1.080
C9	H9	1.080	1.080
C10	H10	1.080	1.080
C11	H11	1.080	1.080
C12	H12	1.080	1.081
C13	H13	1.080	1.081
C14	H14	1.080	1.080
C23	H23	1.100	1.090
C23	H23A	1.100	1.090
C24	H24	1.100	1.090
C24	H24A	1.100	1.090
C25	H25	1.100	1.090
C25	H25A	1.100	1.091
C26	H26	1.100	1.090
C26	H26A	1.100	1.090

Bond Angles for 625

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N1	C1	C23	178.2	179.9
C1	C23	C25	113.2	109.4
C1	C23	H23	108.2	109.5
C1	C23	H23A	108.2	109.5
C17	O1	C26	119.1	117.0
O1	C17	C8	115.6	119.9
O1	C17	C9	125.7	119.9
O1	C26	C25	107.0	109.4
O1	C26	H26	110.3	109.5
O1	C26	H26A	110.3	109.4
CL1	C18	C10	116.8	120.1
CL1	C18	C16	122.7	120.1
C3	C2	C5	120.5	120.2
C2	C3	C10	120.1	120.4
C3	C2	H2	119.7	119.9
C2	C3	H3	119.9	119.8
C2	C5	C16	120.2	119.8
C5	C2	H2	119.8	119.9
C2	C5	H5	119.9	120.1
C21	N2	C22	118.3	121.6
N2	C21	C13	122.9	120.8
N2	C21	C24	117.5	119.6
N2	C22	N4	117.8	119.7
N2	C22	C14	122.3	120.6
C3	C10	C18	119.7	120.1
C10	C3	H3	120.0	119.8
C3	C10	H10	120.1	120.0
C19	N3	C20	110.1	108.5
C19	N3	C24	125.8	125.7
N3	C19	C11	106.1	108.1
N3	C19	C15	126.8	125.9
C20	N3	C24	124.1	125.8
N3	C20	C12	107.3	108.1
N3	C20	C16	125.3	125.9
N3	C24	C21	107.0	109.4
N3	C24	H24	110.3	109.5
N3	C24	H24A	110.3	109.4
C13	C4	C14	119.6	118.5
C4	C13	C21	118.3	119.3
C13	C4	H4	120.2	120.7
C4	C13	H13	120.9	120.3
C4	C14	C22	118.6	119.1
C14	C4	H4	120.2	120.8
C4	C14	H14	120.7	120.5
N4	C22	C14	119.9	119.7
C22	N4	HN4	109.5	120.0
C22	N4	HN4A	109.4	119.9
C5	C16	C18	118.9	119.7
C5	C16	C20	117.1	120.2
C16	C5	H5	119.9	120.1
C8	C6	C15	121.4	119.9
C6	C8	C17	120.3	120.1
C8	C6	H6	119.3	120.1
C6	C8	H8	119.8	119.9
C6	C15	C7	118.1	119.8
C6	C15	C19	121.7	120.1
C15	C6	H6	119.3	120.0
C9	C7	C15	120.6	119.9
C7	C9	C17	120.9	120.1
C9	C7	H7	119.7	120.0
C7	C9	H9	119.6	120.0
C7	C15	C19	120.2	120.1
C15	C7	H7	119.7	120.1
C8	C17	C9	118.7	120.2
C17	C8	H8	119.8	120.0
C17	C9	H9	119.6	120.0
C10	C18	C16	120.5	119.8
C18	C10	H10	120.2	119.9
C12	C11	C19	108.8	107.7
C11	C12	C20	107.7	107.7
C12	C11	H11	125.6	126.2
C11	C12	H12	126.1	126.2
C11	C19	C15	127.1	125.9
C19	C11	H11	125.6	126.2
C12	C20	C16	127.5	126.0
C20	C12	H12	126.2	126.1
C13	C21	C24	119.6	119.6
C21	C13	H13	120.9	120.3
C22	C14	H14	120.7	120.4
C18	C16	C20	124.1	120.1
C21	C24	H24	110.3	109.5
C21	C24	H24A	110.3	109.4
C23	C25	C26	112.3	109.5
C25	C23	H23	108.3	109.4
C25	C23	H23A	108.3	109.5
C23	C25	H25	108.5	109.5
C23	C25	H25A	108.6	109.5
C26	C25	H25	108.5	109.5
C26	C25	H25A	108.6	109.5
C25	C26	H26	110.3	109.4
C25	C26	H26A	110.3	109.5
HN4	N4	HN4A	109.5	120.1
H23	C23	H23A	110.7	109.5
H24	C24	H24A	108.6	109.5
H25	C25	H25A	110.4	109.5
H26	C26	H26A	108.6	109.5

Torsion Angles for 625

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N1	C1	C23	C25	170.4	140.9
N1	C1	C23	H23	290.4	260.9
N1	C1	C23	H23A	50.4	20.9
C1	C23	C25	C26	97.3	180.0
C25	C23	C1	H23	240.0	240.1
C25	C23	C1	H23A	120.0	120.0
C1	C23	C25	H25	217.3	300.0
C1	C23	C25	H25A	337.3	60.0
H23	C23	C1	H23A	240.0	240.0
C17	O1	C26	C25	177.8	180.0
C17	O1	C26	H26	297.9	300.0
C17	O1	C26	H26A	57.8	60.0
C6	C8	C17	O1	180.0	180.0
C7	C9	C17	O1	180.0	180.0
C8	C17	O1	C9	180.2	180.0
O1	C17	C8	H8	0.0	359.9
O1	C17	C9	H9	360.0	0.0
C26	O1	C17	C8	299.5	180.0
C26	O1	C17	C9	119.3	360.0
C23	C25	C26	O1	219.4	180.0
O1	C26	C25	H25	99.5	60.0
O1	C26	C25	H25A	339.5	300.0
C25	C26	O1	H26	240.0	240.0
C25	C26	O1	H26A	120.0	120.0
H26	C26	O1	H26A	240.0	239.9
C3	C10	C18	CL1	180.2	180.0
C5	C16	C18	CL1	179.7	180.0
C10	C18	CL1	C16	179.9	180.0
CL1	C18	C10	H10	0.2	0.0
CL1	C18	C16	C20	0.1	0.0
C3	C2	C5	C16	359.7	360.0
C5	C2	C3	H2	180.0	180.3
C3	C2	C5	H5	179.7	180.0
C2	C3	C10	C18	359.8	360.0
C10	C3	C2	H3	180.0	180.1
C2	C3	C10	H10	179.9	180.0
C5	C2	C3	C10	0.2	0.0
C3	C2	C5	H2	180.0	179.7
C5	C2	C3	H3	180.2	180.0
C2	C5	C16	C18	0.3	0.0
C2	C5	C16	C20	179.9	180.0
C16	C5	C2	H5	180.0	180.0
C21	N2	C22	N4	179.3	180.0
C21	N2	C22	C14	0.2	0.0
N3	C24	C21	N2	197.9	306.7
C4	C13	C21	N2	359.6	0.0
C13	C21	N2	C24	180.5	180.0
N2	C21	C13	H13	179.6	180.1
N2	C21	C24	H24	77.9	186.7
N2	C21	C24	H24A	317.9	66.6
C22	N2	C21	C13	0.3	359.9
C22	N2	C21	C24	179.8	179.9
C4	C14	C22	N2	359.6	0.0
N4	C22	N2	C14	179.2	180.0
N2	C22	N4	HN4	360.0	0.0
N2	C22	N4	HN4A	120.0	180.0
N2	C22	C14	H14	179.6	180.0
CL1	C18	C10	C3	180.2	180.0
C10	C3	C2	C5	0.2	0.0
C10	C3	C2	H2	180.2	179.7
C2	C3	C10	H3	180.0	179.9
C3	C10	C18	C16	0.2	0.0
C18	C10	C3	H10	180.0	180.0
C20	N3	C19	C24	179.3	180.2
C19	N3	C20	C12	359.9	0.0
C19	N3	C20	C16	180.3	180.1
C19	N3	C24	C21	74.9	263.4
C19	N3	C24	H24	194.9	23.5
C19	N3	C24	H24A	314.9	143.5
C6	C15	C19	N3	319.6	22.7
C7	C15	C19	N3	139.8	202.7
C12	C11	C19	N3	0.5	0.1
C11	C19	N3	C15	179.8	179.9
N3	C19	C11	H11	180.5	180.0
C19	N3	C20	C24	180.7	179.8
C20	N3	C19	C11	359.8	360.0
C20	N3	C19	C15	180.0	180.0
C20	N3	C24	C21	255.7	83.2
C20	N3	C24	H24	15.7	203.2
C20	N3	C24	H24A	135.7	323.3
C5	C16	C20	N3	118.2	49.3
C11	C12	C20	N3	0.4	0.0
C12	C20	N3	C16	179.5	180.0
N3	C20	C12	H12	180.4	179.9
C18	C16	C20	N3	297.8	229.3
N2	C21	C24	N3	197.9	306.7
C19	N3	C24	C20	179.2	180.2
C24	N3	C19	C11	180.5	179.7
C24	N3	C19	C15	0.7	359.8
C24	N3	C20	C12	179.1	180.2
C24	N3	C20	C16	359.6	0.3
C13	C21	C24	N3	17.4	126.7
C21	C24	N3	H24	240.0	240.0
C21	C24	N3	H24A	120.0	119.9
H24	C24	N3	H24A	240.0	240.0
N2	C21	C13	C4	359.6	0.0
C13	C4	C14	C22	0.2	360.0
C14	C4	C13	H4	180.0	180.0
C13	C4	C14	H14	180.2	180.0
C4	C13	C21	C24	180.1	180.0
C21	C13	C4	H13	180.0	180.0
N2	C22	C14	C4	359.6	0.0
C14	C4	C13	C21	0.1	0.0
C13	C4	C14	H4	180.0	180.0
C14	C4	C13	H13	180.1	180.0
N4	C22	C14	C4	180.4	180.0
C22	C14	C4	H14	180.0	180.0
N2	C22	N4	C14	180.8	180.0
C4	C14	C22	N4	180.4	180.0
N4	C22	C14	H14	0.5	360.0
HN4	N4	C22	HN4A	240.0	180.1
CL1	C18	C16	C5	179.7	180.0
C16	C5	C2	H2	179.7	180.3
C2	C5	C16	H5	180.0	180.0
N3	C20	C16	C5	118.2	49.3
C10	C18	C16	C5	359.8	360.0
C12	C20	C16	C5	298.8	229.4
C18	C16	C5	C20	180.4	180.0
O1	C17	C8	C6	180.0	180.0
C8	C6	C15	C7	0.1	0.1
C8	C6	C15	C19	180.3	180.0
C15	C6	C8	H6	180.0	180.2
C6	C8	C17	C9	0.2	0.0
C17	C8	C6	H8	180.0	179.9
N3	C19	C15	C6	319.6	22.7
C15	C6	C8	C17	359.9	359.9
C8	C6	C15	H6	180.0	179.8
C15	C6	C8	H8	179.8	180.0
C9	C7	C15	C6	359.9	359.9
C7	C15	C6	C19	179.8	180.1
C6	C15	C7	H7	179.9	180.0
C11	C19	C15	C6	139.8	202.8
O1	C17	C9	C7	180.0	180.0
C6	C15	C7	C9	359.9	359.9
C9	C7	C15	C19	179.6	180.0
C15	C7	C9	H7	180.0	180.0
C8	C17	C9	C7	359.7	360.0
C17	C9	C7	H9	180.0	180.0
N3	C19	C15	C7	139.8	202.7
C6	C15	C7	C19	180.2	179.9
C7	C15	C6	H6	180.1	180.3
C15	C7	C9	C17	0.2	0.0
C9	C7	C15	H7	180.0	180.0
C15	C7	C9	H9	180.2	180.0
C11	C19	C15	C7	320.0	22.8
C8	C17	O1	C26	299.5	180.0
O1	C17	C8	C9	179.8	180.0
C17	C8	C6	C15	359.9	359.9
C17	C8	C6	H6	179.8	179.7
C6	C8	C17	H8	180.0	180.1
C7	C9	C17	C8	359.7	360.0
C8	C17	C9	H9	179.8	180.0
C9	C17	O1	C26	119.3	360.0
O1	C17	C9	C8	180.2	180.0
C17	C9	C7	C15	0.2	0.0
C17	C9	C7	H7	180.2	180.0
C7	C9	C17	H9	180.0	180.0
C9	C17	C8	H8	180.2	180.0
CL1	C18	C10	C16	180.1	180.0
C18	C10	C3	H3	179.9	180.0
C3	C10	C18	H10	180.0	180.0
C5	C16	C18	C10	359.8	360.0
C10	C18	C16	C20	180.2	180.0
N3	C19	C11	C12	0.5	0.1
N3	C20	C12	C11	0.4	0.0
C12	C11	C19	C15	180.3	180.0
C19	C11	C12	H11	180.0	180.0
C11	C12	C20	C16	179.9	180.0
C20	C12	C11	H12	180.0	179.9
C11	C19	N3	C20	359.8	360.0
C11	C19	N3	C24	180.5	179.7
N3	C19	C11	C15	180.2	180.1
C6	C15	C19	C11	139.8	202.8
C7	C15	C19	C11	320.0	22.8
C19	C11	C12	C20	359.5	360.0
C12	C11	C19	H11	180.0	180.0
C19	C11	C12	H12	179.5	180.0
C12	C20	N3	C24	179.1	180.2
N3	C20	C12	C16	180.5	180.0
C5	C16	C20	C12	298.8	229.4
C20	C12	C11	C19	359.5	360.0
C20	C12	C11	H11	179.4	180.0
C11	C12	C20	H12	180.0	180.1
C18	C16	C20	C12	118.4	49.4
C13	C21	N2	C22	0.3	359.9
N2	C21	C13	C24	179.5	180.0
N3	C24	C21	C13	17.4	126.7
C21	C13	C4	C14	0.1	0.0
C21	C13	C4	H4	180.1	180.0
C4	C13	C21	H13	180.0	180.0
C13	C21	C24	H24	257.4	6.7
C13	C21	C24	H24A	137.4	246.6
N2	C22	C14	N4	179.1	180.0
C22	C14	C4	H4	180.3	180.0
C4	C14	C22	H14	180.0	180.0
C14	C22	N4	HN4	179.2	180.0
C14	C22	N4	HN4A	299.2	360.0
C15	C19	N3	C20	180.0	180.0
C15	C19	N3	C24	0.7	359.8
N3	C19	C15	C11	179.8	179.9
C6	C15	C19	C7	179.8	180.1
C19	C15	C6	H6	0.3	0.2
C19	C15	C7	H7	359.6	0.0
C15	C19	C11	H11	0.3	360.0
CL1	C18	C16	C10	179.9	180.0
N3	C20	C16	C18	297.8	229.3
C5	C16	C18	C20	179.6	180.0
C18	C16	C5	H5	180.3	180.0
C16	C18	C10	H10	180.2	180.0
C12	C20	C16	C18	118.4	49.4
C16	C20	N3	C24	359.6	0.3
N3	C20	C16	C12	179.4	179.9
C5	C16	C20	C18	180.4	180.0
C20	C16	C5	H5	359.9	360.0
C16	C20	C12	H12	359.9	359.9
C24	C21	N2	C22	179.8	179.9
N2	C21	C24	C13	180.5	180.0
N3	C24	C21	H24	120.0	120.0
N3	C24	C21	H24A	240.0	240.1
C24	C21	C13	H13	0.1	0.1
H24	C24	C21	H24A	120.0	120.0
C1	C23	C25	H23	120.0	119.9
C1	C23	C25	H23A	240.0	240.0
O1	C26	C25	C23	219.4	180.0
C26	C25	C23	H25	240.0	240.0
C26	C25	C23	H25A	120.0	120.0
C23	C25	C26	H26	99.4	60.0
C23	C25	C26	H26A	339.5	300.0
H23	C23	C25	H23A	120.0	120.0
H25	C25	C23	H25A	240.0	240.0
O1	C26	C25	H26	120.0	120.0
O1	C26	C25	H26A	240.0	240.1
C26	C25	C23	H23	337.3	60.0
C26	C25	C23	H23A	217.3	300.0
C23	C25	C26	H25	120.0	120.0
C23	C25	C26	H25A	240.0	240.0
H25	C25	C26	H25A	120.0	120.0
H26	C26	C25	H26A	120.0	120.1
C3	C2	H2	C5	180.0	180.3
H2	C2	C3	C10	180.2	179.7
H2	C2	C3	H3	0.2	359.6
H2	C2	C5	C16	179.7	180.3
H2	C2	C5	H5	359.7	0.3
H3	C3	C2	C5	180.2	180.0
C2	C3	H3	C10	180.0	180.1
H3	C3	C2	H2	0.2	359.6
H3	C3	C10	C18	179.9	180.0
H3	C3	C10	H10	359.9	0.0
C13	C4	H4	C14	180.0	180.0
H4	C4	C13	C21	180.1	180.0
H4	C4	C13	H13	0.1	359.9
H4	C4	C14	C22	180.3	180.0
H4	C4	C14	H14	0.3	0.0
HN4	N4	C22	C14	179.2	180.0
C22	N4	HN4	HN4A	120.0	179.9
HN4A	N4	C22	C14	299.2	360.0
C22	N4	HN4A	HN4	240.0	180.1
C2	C5	H5	C16	180.0	180.0
H5	C5	C2	H2	359.7	0.3
H5	C5	C16	C18	180.3	180.0
H5	C5	C16	C20	359.9	360.0
C8	C6	H6	C15	180.0	180.2
H6	C6	C8	C17	179.8	179.7
H6	C6	C8	H8	359.8	359.8
H6	C6	C15	C7	180.1	180.3
H6	C6	C15	C19	0.3	0.2
C9	C7	H7	C15	180.0	180.0
H7	C7	C9	C17	180.2	180.0
H7	C7	C9	H9	0.2	360.0
H7	C7	C15	C19	359.6	0.0
H8	C8	C6	C15	179.8	180.0
C6	C8	H8	C17	180.0	179.9
H8	C8	C6	H6	359.8	359.8
H8	C8	C17	C9	180.2	180.0
H9	C9	C7	C15	180.2	180.0
C7	C9	H9	C17	180.0	180.0
H9	C9	C7	H7	0.2	360.0
C3	C10	H10	C18	180.0	180.0
H10	C10	C3	H3	359.9	0.0
H10	C10	C18	C16	180.2	180.0
C12	C11	H11	C19	180.0	180.0
H11	C11	C12	C20	179.4	180.0
H11	C11	C12	H12	359.5	0.1
H11	C11	C19	C15	0.3	360.0
H12	C12	C11	C19	179.5	180.0
C11	C12	H12	C20	180.0	179.9
H12	C12	C11	H11	359.5	0.1
H12	C12	C20	C16	359.9	359.9
H13	C13	C4	C14	180.1	180.0
C4	C13	H13	C21	180.0	180.0
H13	C13	C4	H4	0.1	359.9
H13	C13	C21	C24	0.1	0.1
C4	C14	H14	C22	180.0	180.0
H14	C14	C4	H4	0.3	0.0
C1	C23	H23	C25	236.9	240.1
C1	C23	H23	H23A	118.4	120.0
H23	C23	C25	C26	337.3	60.0
C25	C23	H23	H23A	241.5	240.0
H23	C23	C25	H25	97.3	180.0
H23	C23	C25	H25A	217.3	300.0
C1	C23	H23A	C25	123.1	120.0
C1	C23	H23A	H23	241.6	240.0
H23A	C23	C25	C26	217.3	300.0
C25	C23	H23A	H23	118.5	120.0
H23A	C23	C25	H25	337.2	60.0
H23A	C23	C25	H25A	97.2	180.0
N3	C24	H24	C21	242.0	240.0
N3	C24	H24	H24A	121.0	120.0
C21	C24	H24	H24A	239.0	240.0
N3	C24	H24A	C21	118.0	119.9
N3	C24	H24A	H24	239.0	240.0
C21	C24	H24A	H24	121.0	120.0
C23	C25	H25	C26	237.7	240.0
H25	C25	C23	H23	97.3	180.0
H25	C25	C23	H23A	337.2	60.0
C23	C25	H25	H25A	118.9	120.0
C26	C25	H25	H25A	241.1	240.0
H25	C25	C26	H26	339.5	300.0
H25	C25	C26	H26A	219.5	180.0
C23	C25	H25A	C26	122.3	120.0
H25A	C25	C23	H23	217.3	300.0
H25A	C25	C23	H23A	97.2	180.0
C23	C25	H25A	H25	241.1	240.0
C26	C25	H25A	H25	118.8	120.0
H25A	C25	C26	H26	219.5	180.0
H25A	C25	C26	H26A	99.5	59.9
O1	C26	H26	C25	242.0	240.0
O1	C26	H26	H26A	121.0	120.0
H26	C26	C25	H25	339.5	300.0
H26	C26	C25	H25A	219.5	180.0
C25	C26	H26	H26A	239.0	240.0
O1	C26	H26A	C25	118.0	119.9
O1	C26	H26A	H26	239.0	239.9
H26A	C26	C25	H25	219.5	180.0
H26A	C26	C25	H25A	99.5	59.9
C25	C26	H26A	H26	121.0	120.0