PDB Chemical Component 61T
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 61T
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
S |
1.601 |
1.656 |
O |
S |
1.427 |
1.421 |
S |
O1 |
1.433 |
1.421 |
S |
O2 |
1.556 |
1.522 |
O2 |
C |
1.424 |
1.429 |
C |
C1 |
1.494 |
1.530 |
C1 |
C18 |
1.524 |
1.543 |
C1 |
C2 |
1.523 |
1.549 |
O4 |
C18 |
1.423 |
1.429 |
C18 |
C17 |
1.529 |
1.539 |
C2 |
C3 |
1.477 |
1.549 |
C17 |
C3 |
1.480 |
1.543 |
C17 |
O3 |
1.438 |
1.429 |
C3 |
N1 |
1.446 |
1.464 |
N1 |
C4 |
1.463 |
1.379 |
C5 |
C4 |
1.348 |
1.369 |
C5 |
C6 |
1.503 |
1.394 |
C4 |
N4 |
1.332 |
1.369 |
N4 |
N3 |
1.382 |
1.399 |
N4 |
C7 |
1.334 |
1.372 |
C6 |
N2 |
1.342 |
1.316 |
N3 |
C9 |
1.363 |
1.321 |
C7 |
N2 |
1.335 |
1.342 |
C7 |
C8 |
1.343 |
1.386 |
C11 |
C12 |
1.393 |
1.381 |
C11 |
C10 |
1.395 |
1.394 |
C9 |
C8 |
1.462 |
1.398 |
C9 |
C10 |
1.453 |
1.485 |
C12 |
C13 |
1.393 |
1.381 |
C10 |
C15 |
1.394 |
1.391 |
C13 |
C14 |
1.384 |
1.390 |
C15 |
C14 |
1.395 |
1.388 |
F |
C16 |
1.311 |
1.399 |
C14 |
S1 |
1.673 |
1.762 |
F1 |
C16 |
1.329 |
1.399 |
C16 |
S1 |
1.771 |
1.814 |
C16 |
F2 |
1.318 |
1.400 |
O3 |
H1 |
0.950 |
0.967 |
O4 |
H2 |
0.951 |
0.967 |
C5 |
H3 |
1.080 |
1.081 |
C6 |
H4 |
1.080 |
1.080 |
C8 |
H5 |
1.080 |
1.080 |
C13 |
H6 |
1.080 |
1.080 |
C15 |
H7 |
1.080 |
1.080 |
C17 |
H8 |
1.100 |
1.090 |
C18 |
H9 |
1.100 |
1.090 |
N |
H10 |
1.000 |
0.970 |
N |
H11 |
1.000 |
0.970 |
C |
H12 |
1.100 |
1.091 |
C |
H13 |
1.100 |
1.090 |
C1 |
H14 |
1.100 |
1.090 |
C2 |
H15 |
1.100 |
1.090 |
C2 |
H16 |
1.100 |
1.090 |
C3 |
H17 |
1.100 |
1.090 |
N1 |
H18 |
1.000 |
0.970 |
C11 |
H19 |
1.080 |
1.079 |
C12 |
H20 |
1.080 |
1.080 |
Bond Angles for 61T
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
S |
O2 |
C |
121.1 |
114.0 |
O2 |
C |
C1 |
109.1 |
109.5 |
O2 |
C |
H12 |
109.5 |
109.5 |
O2 |
C |
H13 |
109.6 |
109.5 |
C |
C1 |
C2 |
109.7 |
110.5 |
C1 |
C |
H12 |
109.6 |
109.4 |
C1 |
C |
H13 |
109.6 |
109.5 |
C |
C1 |
H14 |
109.9 |
110.4 |
C1 |
C18 |
H9 |
108.1 |
110.0 |
C1 |
C2 |
C3 |
101.8 |
102.8 |
C2 |
C1 |
H14 |
109.5 |
110.6 |
C1 |
C2 |
H15 |
111.4 |
110.8 |
C1 |
C2 |
H16 |
111.3 |
110.7 |
O4 |
C18 |
C17 |
120.5 |
110.0 |
C18 |
O4 |
H2 |
109.5 |
114.0 |
O4 |
C18 |
H9 |
109.4 |
110.0 |
C18 |
C17 |
C3 |
105.9 |
106.6 |
C18 |
C17 |
H8 |
107.7 |
110.1 |
C17 |
C3 |
C2 |
113.0 |
104.2 |
C2 |
C3 |
N1 |
116.2 |
110.5 |
C3 |
C2 |
H15 |
111.3 |
110.8 |
C3 |
C2 |
H16 |
111.4 |
110.7 |
C2 |
C3 |
H17 |
101.1 |
110.5 |
C17 |
C3 |
N1 |
119.7 |
110.5 |
C3 |
C17 |
H8 |
108.3 |
110.0 |
C17 |
C3 |
H17 |
101.1 |
110.5 |
C17 |
O3 |
H1 |
109.5 |
114.0 |
C3 |
N1 |
C4 |
118.9 |
120.0 |
N1 |
C3 |
H17 |
101.4 |
110.5 |
C3 |
N1 |
H18 |
107.0 |
120.0 |
C5 |
C4 |
N1 |
124.5 |
120.5 |
N1 |
C4 |
N4 |
118.6 |
120.5 |
C4 |
N1 |
H18 |
107.0 |
120.0 |
C6 |
C5 |
C4 |
117.4 |
119.4 |
C5 |
C4 |
N4 |
116.9 |
119.0 |
C4 |
C5 |
H3 |
121.3 |
120.3 |
C5 |
C6 |
N2 |
121.8 |
120.4 |
C6 |
C5 |
H3 |
121.3 |
120.3 |
C5 |
C6 |
H4 |
119.1 |
119.8 |
C4 |
N4 |
N3 |
120.8 |
132.4 |
C6 |
N2 |
C7 |
115.6 |
121.0 |
N2 |
C6 |
H4 |
119.1 |
119.8 |
C8 |
C7 |
N2 |
130.3 |
132.3 |
C7 |
C8 |
H5 |
126.2 |
126.2 |
C12 |
C11 |
H19 |
119.8 |
120.0 |
C11 |
C12 |
H20 |
119.1 |
119.8 |
C9 |
C8 |
H5 |
126.2 |
126.2 |
C9 |
C10 |
C15 |
120.3 |
120.0 |
C12 |
C13 |
H6 |
121.2 |
119.9 |
C10 |
C15 |
C14 |
121.0 |
119.7 |
C10 |
C15 |
H7 |
119.5 |
120.1 |
C13 |
C14 |
S1 |
122.0 |
120.0 |
C14 |
C13 |
H6 |
121.2 |
119.9 |
C15 |
C14 |
S1 |
116.8 |
120.0 |
C14 |
S1 |
C16 |
111.3 |
103.0 |
S1 |
C16 |
F2 |
110.7 |
109.5 |
H10 |
N |
H11 |
109.4 |
120.0 |
H12 |
C |
H13 |
109.5 |
109.4 |
H15 |
C2 |
H16 |
109.4 |
110.8 |
Torsion Angles for 61T
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N |
S |
O2 |
C |
60.2 |
75.0 |
O |
S |
O2 |
C |
184.2 |
188.5 |
S |
O2 |
C |
C1 |
156.6 |
180.0 |
S |
O2 |
C |
H12 |
276.6 |
300.0 |
S |
O2 |
C |
H13 |
36.7 |
59.9 |
O2 |
C |
C1 |
C2 |
167.1 |
70.2 |
C1 |
C |
O2 |
H12 |
240.0 |
240.0 |
C1 |
C |
O2 |
H13 |
119.9 |
120.1 |
O2 |
C |
C1 |
H14 |
46.7 |
307.5 |
H12 |
C |
O2 |
H13 |
239.9 |
240.0 |
O2 |
C |
C1 |
H12 |
119.9 |
120.0 |
O2 |
C |
C1 |
H13 |
240.1 |
239.9 |
C |
C1 |
C18 |
H9 |
359.0 |
337.0 |
C |
C1 |
C2 |
C3 |
124.6 |
156.6 |
C2 |
C1 |
C |
H14 |
120.5 |
122.7 |
C |
C1 |
C2 |
H15 |
243.4 |
275.0 |
C |
C1 |
C2 |
H16 |
5.9 |
38.3 |
H12 |
C |
C1 |
H13 |
120.1 |
120.0 |
O2 |
C |
C1 |
C18 |
288.3 |
185.0 |
C1 |
C18 |
O4 |
H2 |
180.0 |
178.6 |
O4 |
C18 |
C1 |
H9 |
117.3 |
121.4 |
C1 |
C18 |
C17 |
C3 |
346.5 |
360.0 |
C1 |
C18 |
C17 |
H8 |
102.2 |
119.2 |
C2 |
C1 |
C |
H12 |
47.2 |
310.2 |
C2 |
C1 |
C |
H13 |
287.0 |
190.3 |
C |
C1 |
C2 |
H14 |
239.3 |
237.4 |
C2 |
C1 |
C18 |
H9 |
118.6 |
95.7 |
C17 |
C3 |
C2 |
C1 |
343.5 |
322.1 |
C1 |
C2 |
C3 |
N1 |
199.5 |
203.4 |
C3 |
C2 |
C1 |
H15 |
241.2 |
241.6 |
C3 |
C2 |
C1 |
H16 |
118.8 |
118.3 |
C1 |
C2 |
C3 |
H17 |
90.8 |
80.7 |
H15 |
C2 |
C1 |
H16 |
237.5 |
236.7 |
C1 |
C18 |
O4 |
H9 |
243.6 |
238.6 |
O4 |
C18 |
C17 |
C3 |
105.1 |
119.3 |
O4 |
C18 |
C17 |
H8 |
220.8 |
238.6 |
C17 |
C18 |
O4 |
H2 |
62.5 |
61.4 |
O4 |
C18 |
C17 |
H9 |
233.3 |
238.6 |
C18 |
C17 |
C3 |
C2 |
19.7 |
23.6 |
C18 |
C17 |
C3 |
N1 |
162.3 |
142.3 |
C3 |
C17 |
C18 |
H8 |
244.3 |
240.7 |
C18 |
C17 |
C3 |
H17 |
272.4 |
264.9 |
C18 |
C17 |
O3 |
H1 |
180.0 |
297.2 |
C3 |
C2 |
C1 |
H14 |
245.4 |
279.2 |
C1 |
C2 |
C3 |
H15 |
118.8 |
118.3 |
C1 |
C2 |
C3 |
H16 |
241.3 |
241.7 |
C17 |
C3 |
C2 |
N1 |
144.0 |
118.7 |
C2 |
C3 |
C17 |
H8 |
264.4 |
264.2 |
C17 |
C3 |
C2 |
H17 |
252.7 |
241.4 |
C2 |
C3 |
N1 |
C4 |
273.6 |
201.3 |
N1 |
C3 |
C2 |
H17 |
108.7 |
122.6 |
C2 |
C3 |
N1 |
H18 |
34.9 |
21.2 |
H15 |
C2 |
C3 |
H16 |
122.5 |
123.3 |
C1 |
C2 |
C3 |
C17 |
343.5 |
322.1 |
C18 |
C17 |
C3 |
H8 |
115.3 |
119.3 |
C2 |
C3 |
C17 |
N1 |
217.4 |
241.3 |
C17 |
C3 |
C2 |
H15 |
224.7 |
203.8 |
C17 |
C3 |
C2 |
H16 |
102.2 |
80.4 |
C2 |
C3 |
C17 |
H17 |
107.3 |
118.6 |
C3 |
C17 |
O3 |
H1 |
60.0 |
180.0 |
C17 |
C3 |
N1 |
C4 |
132.1 |
86.4 |
N1 |
C3 |
C17 |
H17 |
249.9 |
237.4 |
C17 |
C3 |
N1 |
H18 |
253.4 |
266.4 |
C17 |
C3 |
N1 |
C2 |
218.5 |
245.2 |
N1 |
C3 |
C2 |
H15 |
80.7 |
85.0 |
N1 |
C3 |
C2 |
H16 |
318.2 |
321.7 |
C2 |
C3 |
N1 |
H17 |
251.4 |
237.4 |
N1 |
C3 |
C17 |
H8 |
47.0 |
23.0 |
C17 |
C3 |
N1 |
H17 |
109.9 |
122.6 |
C5 |
C4 |
N1 |
C3 |
356.1 |
360.0 |
C3 |
N1 |
C4 |
N4 |
175.7 |
180.1 |
C4 |
N1 |
C3 |
H18 |
238.7 |
180.0 |
C4 |
N1 |
C3 |
H17 |
22.2 |
323.8 |
C3 |
N1 |
C4 |
H18 |
121.3 |
180.0 |
C6 |
C5 |
C4 |
N1 |
179.7 |
180.0 |
C5 |
C4 |
N1 |
N4 |
180.4 |
179.9 |
N1 |
C4 |
C5 |
H3 |
359.7 |
0.3 |
N1 |
C4 |
N4 |
N3 |
0.7 |
359.9 |
C3 |
N1 |
C4 |
C5 |
356.1 |
360.0 |
N1 |
C4 |
C5 |
N4 |
179.6 |
180.1 |
C5 |
C4 |
N1 |
H18 |
234.8 |
180.0 |
C4 |
C5 |
C6 |
N2 |
0.9 |
0.1 |
C6 |
C5 |
C4 |
H3 |
180.0 |
179.7 |
C4 |
C5 |
C6 |
H4 |
180.9 |
180.0 |
C5 |
C4 |
N4 |
N3 |
180.4 |
180.0 |
C6 |
C5 |
C4 |
N4 |
0.1 |
360.0 |
C4 |
C5 |
C6 |
H3 |
180.0 |
180.3 |
C5 |
C6 |
N2 |
C7 |
359.0 |
359.9 |
N2 |
C6 |
C5 |
H4 |
180.0 |
180.1 |
C5 |
C4 |
N4 |
N1 |
179.6 |
180.1 |
N4 |
C4 |
N1 |
H18 |
54.4 |
0.1 |
N4 |
C4 |
C5 |
H3 |
180.0 |
180.3 |
C5 |
C4 |
N4 |
C7 |
359.2 |
0.1 |
N4 |
C7 |
C8 |
H5 |
181.5 |
179.9 |
N2 |
C6 |
C5 |
C4 |
0.9 |
0.1 |
N2 |
C6 |
C5 |
H3 |
180.9 |
179.7 |
C5 |
C6 |
N2 |
H4 |
180.0 |
179.9 |
C8 |
C7 |
N2 |
C6 |
180.7 |
180.0 |
N3 |
C9 |
C8 |
H5 |
178.2 |
180.1 |
C7 |
N2 |
C6 |
H4 |
179.0 |
180.0 |
N2 |
C7 |
C8 |
H5 |
1.2 |
0.0 |
C6 |
N2 |
C7 |
C8 |
180.7 |
180.0 |
C9 |
C8 |
C7 |
H5 |
180.0 |
180.0 |
C11 |
C12 |
C13 |
H6 |
179.8 |
180.0 |
C11 |
C10 |
C15 |
H7 |
180.8 |
180.2 |
C9 |
C8 |
C7 |
N2 |
181.2 |
180.1 |
C7 |
C8 |
C9 |
H5 |
180.0 |
180.0 |
C10 |
C9 |
C8 |
H5 |
359.1 |
0.1 |
C9 |
C10 |
C15 |
C14 |
180.2 |
180.0 |
C9 |
C10 |
C15 |
H7 |
0.2 |
359.9 |
C12 |
C13 |
C14 |
S1 |
180.0 |
179.8 |
C14 |
C13 |
C12 |
H6 |
180.0 |
180.2 |
C10 |
C15 |
C14 |
S1 |
179.6 |
180.0 |
C12 |
C13 |
C14 |
H6 |
180.0 |
179.8 |
C10 |
C15 |
C14 |
C13 |
359.0 |
359.9 |
C15 |
C14 |
C13 |
S1 |
180.6 |
180.1 |
C13 |
C14 |
S1 |
C16 |
255.5 |
360.0 |
C10 |
C15 |
C14 |
H7 |
180.0 |
179.9 |
C13 |
C14 |
C15 |
S1 |
179.4 |
179.9 |
C15 |
C14 |
C13 |
H6 |
180.7 |
180.0 |
C15 |
C14 |
S1 |
C16 |
74.9 |
179.9 |
S1 |
C14 |
C13 |
H6 |
0.0 |
359.9 |
C14 |
S1 |
C16 |
F2 |
172.4 |
60.0 |
H2 |
O4 |
C18 |
C17 |
62.5 |
61.4 |
H2 |
O4 |
C18 |
H9 |
296.5 |
300.0 |
H3 |
C5 |
C4 |
N1 |
359.7 |
0.3 |
C6 |
C5 |
H3 |
C4 |
180.0 |
180.3 |
H3 |
C5 |
C4 |
N4 |
180.0 |
180.3 |
H3 |
C5 |
C6 |
N2 |
180.9 |
179.7 |
H3 |
C5 |
C6 |
H4 |
0.9 |
359.7 |
H4 |
C6 |
C5 |
C4 |
180.9 |
180.0 |
C5 |
C6 |
H4 |
N2 |
180.0 |
180.1 |
H4 |
C6 |
C5 |
H3 |
0.9 |
359.7 |
H4 |
C6 |
N2 |
C7 |
179.0 |
180.0 |
H5 |
C8 |
C7 |
N2 |
1.2 |
0.0 |
H6 |
C13 |
C14 |
S1 |
0.0 |
359.9 |
C10 |
C15 |
H7 |
C14 |
180.0 |
180.1 |
H7 |
C15 |
C14 |
S1 |
359.6 |
0.1 |
C18 |
C17 |
H8 |
C3 |
245.9 |
242.8 |
H8 |
C17 |
C3 |
C2 |
264.4 |
264.2 |
H8 |
C17 |
C3 |
N1 |
47.0 |
23.0 |
H8 |
C17 |
C3 |
H17 |
157.1 |
145.6 |
H8 |
C17 |
O3 |
H1 |
301.5 |
58.7 |
O4 |
C18 |
H9 |
C17 |
132.9 |
121.4 |
H9 |
C18 |
O4 |
H2 |
296.5 |
300.0 |
H9 |
C18 |
C17 |
C3 |
231.8 |
240.7 |
H9 |
C18 |
C17 |
H8 |
347.5 |
360.0 |
O2 |
C |
H12 |
C1 |
240.3 |
240.0 |
O2 |
C |
H12 |
H13 |
120.2 |
120.0 |
H12 |
C |
C1 |
C2 |
47.2 |
310.2 |
C1 |
C |
H12 |
H13 |
239.8 |
240.0 |
H12 |
C |
C1 |
H14 |
286.7 |
187.5 |
O2 |
C |
H13 |
C1 |
119.6 |
120.0 |
O2 |
C |
H13 |
H12 |
239.8 |
240.0 |
H13 |
C |
C1 |
C2 |
287.0 |
190.3 |
C1 |
C |
H13 |
H12 |
120.2 |
120.0 |
H13 |
C |
C1 |
H14 |
166.6 |
67.6 |
C |
C1 |
H14 |
C2 |
120.5 |
122.7 |
H14 |
C1 |
C |
H12 |
286.7 |
187.5 |
H14 |
C1 |
C |
H13 |
166.6 |
67.6 |
H14 |
C1 |
C18 |
H9 |
240.4 |
214.5 |
H14 |
C1 |
C2 |
C3 |
245.4 |
279.2 |
H14 |
C1 |
C2 |
H15 |
4.1 |
37.6 |
H14 |
C1 |
C2 |
H16 |
126.6 |
160.9 |
C1 |
C2 |
H15 |
C3 |
247.1 |
246.6 |
H15 |
C2 |
C1 |
H14 |
4.1 |
37.6 |
C1 |
C2 |
H15 |
H16 |
123.6 |
123.3 |
H15 |
C2 |
C3 |
N1 |
80.7 |
85.0 |
C3 |
C2 |
H15 |
H16 |
236.4 |
236.7 |
H15 |
C2 |
C3 |
H17 |
332.0 |
322.4 |
C1 |
C2 |
H16 |
C3 |
112.9 |
113.3 |
H16 |
C2 |
C1 |
H14 |
126.6 |
160.9 |
C1 |
C2 |
H16 |
H15 |
236.4 |
236.7 |
H16 |
C2 |
C3 |
N1 |
318.2 |
321.7 |
C3 |
C2 |
H16 |
H15 |
123.6 |
123.4 |
H16 |
C2 |
C3 |
H17 |
209.5 |
199.0 |
C17 |
C3 |
H17 |
C2 |
116.4 |
114.8 |
C2 |
C3 |
H17 |
N1 |
119.9 |
122.6 |
H17 |
C3 |
C2 |
H15 |
332.0 |
322.4 |
H17 |
C3 |
C2 |
H16 |
209.5 |
199.0 |
C17 |
C3 |
H17 |
N1 |
236.3 |
237.4 |
H17 |
C3 |
C17 |
H8 |
157.1 |
145.6 |
H17 |
C3 |
N1 |
C4 |
22.2 |
323.8 |
H17 |
C3 |
N1 |
H18 |
143.5 |
143.8 |
C3 |
N1 |
H18 |
C4 |
231.4 |
180.0 |
H18 |
N1 |
C3 |
H17 |
143.5 |
143.8 |
H18 |
N1 |
C4 |
N4 |
54.4 |
0.1 |
H19 |
C11 |
C12 |
H20 |
0.0 |
360.0 |
H20 |
C12 |
C11 |
H19 |
0.0 |
360.0 |
H20 |
C12 |
C13 |
H6 |
359.8 |
0.1 |