Atom Nomenclature for 61Q

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 61Q

Atom Name (V3) Atom Name (V2)
NAB N1
CAF C1
CAD C2
CAA C3
OAW O1
CCR C4
CCQ C5
CCP C6
COW C7
OAX O2
OBI O3
NBH N2
CCO C8
CCS C9
CCT C10
CCU C11
CCV C12
CCN C13
NBG N3
CCM C14
OAV O4
CCF C15
CCG C16
CCH C17
OAU O5
CAH C18
CAK C19
CAL C20
NAE N4
NBF N5
CCE C21
CCI C22
CCJ C23
CCK C24
CCL C25
CCD C26
NBE N6
CCC C27
OAR O6
CBV C28
CBW C29
CBX C30
OAN O7
CAM C31
CAO C32
CAP C33
NAG N7
NBD N8
CBU C34
CBY C35
CBZ C36
CCA C37
CCB C38
CBT C39
NBC N9
CBS C40
OAJ O8
CBQ C41
CBR C42
NBB N10
CBP C43
CBO C44
NBA N11
OAY O9
OAZ O10
CBN C45
CBM C46
CBL C47
CBK C48
CBJ C49
OAC O11
CAQ C50
CAS C51
CAT C52
NAI N12
H1 H1
H2 H2
H4 H4
H5 H5
H6 H6
H7 H7
H8 H8
H9 H9
H10 H10
H11 H11
H12 H12
H13 H13
H14 H14
H15 H15
H16 H16
H17 H17
H18 H18
H19 H19
H20 H20
H21 H21
H22 H22
H23 H23
H24 H24
H26 H26
H27 H27
H28 H28
H29 H29
H30 H30
H31 H31
H32 H32
H33 H33
H34 H34
H35 H35
H36 H36
H37 H37
H38 H38
H40 H40
H41 H41
H42 H42
H43 H43
H44 H44
H45 H45
H46 H46
H47 H47
H48 H48
H49 H49
H50 H50
H51 H51
H52 H52
H53 H53
H54 H54
H55 H55