PDB Chemical Component 60X
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 60X
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C4 |
O |
1.432 |
1.429 |
F1 |
C15 |
1.357 |
1.351 |
O |
C3 |
1.346 |
1.355 |
C16 |
C15 |
1.368 |
1.384 |
C16 |
C17 |
1.370 |
1.384 |
F2 |
C17 |
1.350 |
1.351 |
C15 |
C14 |
1.369 |
1.385 |
C17 |
C12 |
1.393 |
1.385 |
C3 |
N1 |
1.320 |
1.327 |
C3 |
C |
1.387 |
1.396 |
F |
C |
1.343 |
1.352 |
N1 |
C2 |
1.346 |
1.325 |
C |
C1 |
1.418 |
1.382 |
C14 |
C13 |
1.384 |
1.382 |
C5 |
N2 |
1.461 |
1.478 |
C5 |
C6 |
1.536 |
1.549 |
C12 |
C13 |
1.394 |
1.382 |
C12 |
C6 |
1.535 |
1.507 |
C2 |
N2 |
1.357 |
1.386 |
C2 |
N |
1.354 |
1.324 |
C1 |
N |
1.345 |
1.326 |
C1 |
C18 |
1.501 |
1.508 |
N2 |
C11 |
1.469 |
1.474 |
C6 |
C10 |
1.555 |
1.544 |
C6 |
N3 |
1.464 |
1.470 |
C10 |
C11 |
1.536 |
1.540 |
C10 |
C9 |
1.517 |
1.495 |
N3 |
C7 |
1.352 |
1.373 |
C9 |
O1 |
1.215 |
1.213 |
C9 |
N5 |
1.380 |
1.340 |
C7 |
N5 |
1.382 |
1.384 |
C7 |
N4 |
1.285 |
1.302 |
N5 |
C8 |
1.472 |
1.466 |
C18 |
H1 |
1.100 |
1.090 |
C18 |
H2 |
1.100 |
1.090 |
C18 |
H3 |
1.100 |
1.090 |
C16 |
H4 |
1.080 |
1.080 |
C11 |
H5 |
1.100 |
1.089 |
C11 |
H6 |
1.100 |
1.090 |
C13 |
H7 |
1.080 |
1.080 |
C14 |
H8 |
1.080 |
1.080 |
C10 |
H9 |
1.100 |
1.089 |
C8 |
H10 |
1.100 |
1.090 |
C8 |
H11 |
1.100 |
1.090 |
C8 |
H12 |
1.099 |
1.089 |
C4 |
H13 |
1.100 |
1.090 |
C4 |
H14 |
1.100 |
1.090 |
C4 |
H15 |
1.101 |
1.090 |
C5 |
H16 |
1.100 |
1.090 |
C5 |
H17 |
1.100 |
1.090 |
N4 |
H18 |
1.000 |
0.971 |
N3 |
H19 |
1.000 |
0.969 |
Bond Angles for 60X
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C4 |
O |
C3 |
117.4 |
117.0 |
O |
C4 |
H13 |
109.5 |
109.5 |
O |
C4 |
H14 |
109.5 |
109.4 |
O |
C4 |
H15 |
109.5 |
109.5 |
C16 |
C15 |
C14 |
123.3 |
120.0 |
C15 |
C16 |
H4 |
121.6 |
120.0 |
C16 |
C17 |
C12 |
123.9 |
120.0 |
C15 |
C14 |
C13 |
118.1 |
120.0 |
C15 |
C14 |
H8 |
120.9 |
120.0 |
C17 |
C12 |
C13 |
116.1 |
120.0 |
C17 |
C12 |
C6 |
123.1 |
119.9 |
C3 |
N1 |
C2 |
117.0 |
120.7 |
C3 |
C |
C1 |
117.1 |
118.5 |
N1 |
C2 |
N |
125.9 |
121.7 |
C14 |
C13 |
H7 |
119.1 |
120.0 |
C5 |
C6 |
N3 |
108.1 |
108.6 |
C13 |
C12 |
C6 |
120.8 |
120.0 |
C12 |
C13 |
H7 |
119.1 |
119.9 |
C12 |
C6 |
C10 |
113.1 |
112.3 |
C12 |
C6 |
N3 |
112.9 |
112.1 |
C2 |
N |
C1 |
116.5 |
120.8 |
C1 |
C18 |
H1 |
109.5 |
109.5 |
C1 |
C18 |
H2 |
109.5 |
109.4 |
C1 |
C18 |
H3 |
109.4 |
109.5 |
N2 |
C11 |
H5 |
110.9 |
109.9 |
N2 |
C11 |
H6 |
110.9 |
109.8 |
C6 |
C10 |
H9 |
109.2 |
110.6 |
C6 |
N3 |
H19 |
118.3 |
121.2 |
C10 |
C11 |
H5 |
110.9 |
109.9 |
C10 |
C11 |
H6 |
110.9 |
110.0 |
C10 |
C9 |
N5 |
117.3 |
123.8 |
C9 |
C10 |
H9 |
109.7 |
110.2 |
C7 |
N5 |
C9 |
121.9 |
120.6 |
N5 |
C7 |
N4 |
119.4 |
121.3 |
C7 |
N5 |
C8 |
120.6 |
119.7 |
C7 |
N4 |
H18 |
112.0 |
119.9 |
N5 |
C8 |
H10 |
109.5 |
109.4 |
N5 |
C8 |
H11 |
109.5 |
109.4 |
N5 |
C8 |
H12 |
109.5 |
109.5 |
H1 |
C18 |
H2 |
109.5 |
109.4 |
H1 |
C18 |
H3 |
109.5 |
109.5 |
H2 |
C18 |
H3 |
109.5 |
109.5 |
H5 |
C11 |
H6 |
109.5 |
109.9 |
H10 |
C8 |
H11 |
109.4 |
109.5 |
H10 |
C8 |
H12 |
109.5 |
109.5 |
H11 |
C8 |
H12 |
109.5 |
109.5 |
H13 |
C4 |
H14 |
109.4 |
109.5 |
H13 |
C4 |
H15 |
109.5 |
109.5 |
H14 |
C4 |
H15 |
109.4 |
109.5 |
H16 |
C5 |
H17 |
109.5 |
110.4 |
Torsion Angles for 60X
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H13 |
C4 |
O |
H14 |
240.0 |
240.0 |
H13 |
C4 |
O |
H15 |
120.0 |
120.1 |
H14 |
C4 |
O |
H15 |
240.0 |
240.0 |
F1 |
C15 |
C16 |
H4 |
2.4 |
0.0 |
F1 |
C15 |
C14 |
H8 |
358.1 |
360.0 |
C3 |
O |
C4 |
H13 |
180.0 |
180.1 |
C3 |
O |
C4 |
H14 |
300.0 |
300.0 |
C3 |
O |
C4 |
H15 |
60.0 |
60.0 |
C15 |
C16 |
C17 |
C12 |
359.6 |
359.9 |
C16 |
C15 |
C14 |
C13 |
359.3 |
0.1 |
C16 |
C15 |
C14 |
H8 |
179.3 |
180.1 |
C16 |
C17 |
C12 |
C13 |
359.2 |
0.1 |
C16 |
C17 |
C12 |
C6 |
180.8 |
180.0 |
C14 |
C15 |
C16 |
H4 |
181.2 |
180.0 |
C15 |
C14 |
C13 |
H7 |
179.4 |
180.0 |
C13 |
C12 |
C17 |
C6 |
178.4 |
180.1 |
C17 |
C12 |
C13 |
H7 |
181.3 |
179.9 |
C17 |
C12 |
C6 |
C10 |
301.7 |
300.0 |
C17 |
C12 |
C6 |
N3 |
179.7 |
177.1 |
C3 |
N1 |
C2 |
N |
359.3 |
0.0 |
C4 |
O |
C3 |
C |
198.7 |
180.0 |
C |
C3 |
N1 |
C2 |
2.6 |
360.0 |
N1 |
C2 |
N |
C1 |
358.6 |
360.0 |
C |
C1 |
C18 |
H1 |
180.1 |
270.0 |
C |
C1 |
C18 |
H2 |
300.2 |
29.9 |
C |
C1 |
C18 |
H3 |
60.2 |
150.0 |
C15 |
C14 |
C13 |
H8 |
180.0 |
179.9 |
C14 |
C13 |
C12 |
C6 |
179.7 |
180.0 |
C12 |
C13 |
C14 |
H7 |
180.0 |
179.9 |
C5 |
N2 |
C11 |
H5 |
123.2 |
117.2 |
C5 |
N2 |
C11 |
H6 |
245.0 |
238.1 |
C12 |
C6 |
C5 |
N3 |
125.2 |
124.5 |
C5 |
C6 |
C10 |
H9 |
280.5 |
274.8 |
C5 |
C6 |
N3 |
H19 |
32.9 |
17.3 |
C15 |
C14 |
C13 |
C12 |
359.4 |
359.9 |
C17 |
C12 |
C13 |
C6 |
181.5 |
179.9 |
C14 |
C13 |
C12 |
H7 |
180.0 |
180.1 |
C13 |
C12 |
C6 |
C10 |
123.3 |
120.0 |
C13 |
C12 |
C6 |
N3 |
1.3 |
357.0 |
C17 |
C12 |
C6 |
C13 |
178.3 |
180.1 |
C5 |
C6 |
C12 |
N3 |
237.4 |
237.4 |
C6 |
C12 |
C13 |
H7 |
359.7 |
360.0 |
C12 |
C6 |
C10 |
H9 |
41.6 |
35.3 |
C12 |
C6 |
N3 |
H19 |
268.0 |
252.7 |
C2 |
N2 |
C11 |
H5 |
309.6 |
354.9 |
C2 |
N2 |
C11 |
H6 |
71.4 |
115.9 |
C3 |
C |
C1 |
N |
0.0 |
359.9 |
N |
C1 |
C18 |
H1 |
360.0 |
90.0 |
N |
C1 |
C18 |
H2 |
120.0 |
210.0 |
N |
C1 |
C18 |
H3 |
240.0 |
330.0 |
H1 |
C18 |
C1 |
H2 |
240.0 |
240.1 |
H1 |
C18 |
C1 |
H3 |
120.0 |
120.0 |
H2 |
C18 |
C1 |
H3 |
240.0 |
240.0 |
C10 |
C11 |
N2 |
H5 |
240.9 |
240.5 |
C10 |
C11 |
N2 |
H6 |
119.1 |
119.6 |
H5 |
C11 |
N2 |
H6 |
238.2 |
239.0 |
C12 |
C6 |
C10 |
N3 |
234.9 |
235.3 |
C6 |
C10 |
C11 |
H5 |
215.5 |
220.7 |
C6 |
C10 |
C11 |
H6 |
93.6 |
99.6 |
C6 |
C10 |
C9 |
N5 |
334.9 |
344.5 |
C9 |
C10 |
C6 |
H9 |
236.9 |
237.0 |
C12 |
C6 |
N3 |
C10 |
125.2 |
124.8 |
N3 |
C6 |
C10 |
H9 |
166.7 |
160.0 |
N2 |
C11 |
C10 |
H5 |
119.1 |
119.4 |
N2 |
C11 |
C10 |
H6 |
240.9 |
240.5 |
H5 |
C11 |
C10 |
H6 |
121.8 |
121.1 |
C12 |
C6 |
C10 |
C9 |
278.5 |
272.3 |
C6 |
C10 |
C9 |
H9 |
122.8 |
123.3 |
C9 |
C10 |
C11 |
H5 |
92.8 |
101.1 |
C9 |
C10 |
C11 |
H6 |
330.9 |
340.1 |
C7 |
N5 |
C9 |
C10 |
353.6 |
2.2 |
C12 |
C6 |
N3 |
C7 |
88.0 |
72.8 |
N3 |
C7 |
N4 |
H18 |
177.2 |
179.6 |
N5 |
C9 |
C10 |
H9 |
212.1 |
221.2 |
C9 |
N5 |
C7 |
N4 |
194.0 |
166.3 |
C7 |
N5 |
C9 |
C8 |
176.7 |
179.5 |
C9 |
N5 |
C8 |
H10 |
180.0 |
179.5 |
C9 |
N5 |
C8 |
H11 |
300.0 |
299.5 |
C9 |
N5 |
C8 |
H12 |
60.0 |
59.5 |
C10 |
C9 |
N5 |
C7 |
353.6 |
2.2 |
N5 |
C7 |
N4 |
H18 |
360.0 |
360.0 |
C7 |
N5 |
C8 |
H10 |
3.3 |
360.0 |
C7 |
N5 |
C8 |
H11 |
123.3 |
120.0 |
C7 |
N5 |
C8 |
H12 |
243.3 |
240.0 |
N4 |
C7 |
N5 |
C9 |
194.0 |
166.3 |
N4 |
C7 |
N5 |
C8 |
10.5 |
345.8 |
C10 |
C9 |
N5 |
C8 |
176.9 |
182.7 |
C7 |
N5 |
C8 |
C9 |
183.3 |
180.5 |
C8 |
N5 |
C7 |
N4 |
10.5 |
345.8 |
H10 |
C8 |
N5 |
H11 |
240.0 |
240.0 |
H10 |
C8 |
N5 |
H12 |
120.0 |
120.0 |
H11 |
C8 |
N5 |
H12 |
240.0 |
240.0 |
C1 |
C18 |
H1 |
H2 |
120.0 |
119.9 |
C1 |
C18 |
H1 |
H3 |
240.0 |
240.0 |
H2 |
C18 |
H1 |
H3 |
120.0 |
120.1 |
C1 |
C18 |
H2 |
H1 |
240.0 |
240.0 |
C1 |
C18 |
H2 |
H3 |
120.0 |
120.0 |
H1 |
C18 |
H2 |
H3 |
240.0 |
240.0 |
C1 |
C18 |
H3 |
H1 |
120.0 |
120.0 |
C1 |
C18 |
H3 |
H2 |
240.0 |
240.0 |
H1 |
C18 |
H3 |
H2 |
120.0 |
120.0 |
H4 |
C16 |
C15 |
C14 |
181.2 |
180.0 |
H4 |
C16 |
C17 |
C12 |
179.6 |
179.9 |
N2 |
C11 |
H5 |
H6 |
122.6 |
120.9 |
C10 |
C11 |
H5 |
H6 |
237.4 |
238.8 |
N2 |
C11 |
H6 |
H5 |
237.4 |
239.0 |
C10 |
C11 |
H6 |
H5 |
122.6 |
121.1 |
H7 |
C13 |
C12 |
C6 |
359.7 |
360.0 |
C15 |
C14 |
H8 |
C13 |
180.0 |
180.1 |
H8 |
C14 |
C13 |
H7 |
359.4 |
0.0 |
H9 |
C10 |
C11 |
H5 |
331.8 |
339.2 |
H9 |
C10 |
C11 |
H6 |
210.0 |
218.1 |
H9 |
C10 |
C9 |
N5 |
212.1 |
221.2 |
N5 |
C8 |
H10 |
H11 |
120.0 |
119.9 |
N5 |
C8 |
H10 |
H12 |
240.0 |
240.0 |
H11 |
C8 |
H10 |
H12 |
120.0 |
120.1 |
N5 |
C8 |
H11 |
H10 |
240.0 |
240.1 |
N5 |
C8 |
H11 |
H12 |
120.0 |
120.0 |
H10 |
C8 |
H11 |
H12 |
240.0 |
239.9 |
N5 |
C8 |
H12 |
H10 |
120.0 |
119.9 |
N5 |
C8 |
H12 |
H11 |
240.0 |
240.0 |
H10 |
C8 |
H12 |
H11 |
120.0 |
120.1 |
H13 |
C4 |
O |
C3 |
180.0 |
180.1 |
O |
C4 |
H13 |
H14 |
120.0 |
120.0 |
O |
C4 |
H13 |
H15 |
240.0 |
240.0 |
H14 |
C4 |
H13 |
H15 |
120.0 |
120.0 |
H14 |
C4 |
O |
C3 |
300.0 |
300.0 |
O |
C4 |
H14 |
H13 |
240.0 |
240.0 |
O |
C4 |
H14 |
H15 |
120.0 |
120.0 |
H13 |
C4 |
H14 |
H15 |
240.0 |
240.0 |
H15 |
C4 |
O |
C3 |
60.0 |
60.0 |
O |
C4 |
H15 |
H13 |
120.0 |
120.0 |
O |
C4 |
H15 |
H14 |
240.0 |
240.0 |
H13 |
C4 |
H15 |
H14 |
120.0 |
120.0 |
H16 |
C5 |
C6 |
N3 |
320.2 |
321.0 |
H17 |
C5 |
C6 |
N3 |
198.1 |
198.8 |