PDB Chemical Component 60V
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 60V
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C17 |
O1 |
1.429 |
1.429 |
O1 |
C16 |
1.346 |
1.356 |
C2 |
C1 |
1.398 |
1.376 |
C2 |
C3 |
1.402 |
1.366 |
C16 |
N6 |
1.322 |
1.327 |
C16 |
C15 |
1.387 |
1.395 |
C1 |
C |
1.420 |
1.337 |
F |
C15 |
1.343 |
1.350 |
N6 |
C12 |
1.349 |
1.326 |
C4 |
C3 |
1.415 |
1.432 |
C4 |
N |
1.142 |
1.135 |
C3 |
S |
1.728 |
1.759 |
C15 |
C13 |
1.413 |
1.384 |
C11 |
N4 |
1.463 |
1.465 |
C11 |
C5 |
1.532 |
1.548 |
C |
S |
1.730 |
1.707 |
C |
C5 |
1.486 |
1.507 |
C12 |
N4 |
1.358 |
1.384 |
C12 |
N5 |
1.354 |
1.324 |
C13 |
N5 |
1.345 |
1.325 |
C13 |
C14 |
1.500 |
1.507 |
N4 |
C10 |
1.473 |
1.474 |
C5 |
C9 |
1.539 |
1.544 |
C5 |
N1 |
1.478 |
1.470 |
C9 |
C10 |
1.533 |
1.540 |
C9 |
C8 |
1.521 |
1.497 |
N1 |
C6 |
1.348 |
1.382 |
C8 |
O |
1.217 |
1.213 |
C8 |
N3 |
1.382 |
1.339 |
C6 |
N3 |
1.383 |
1.385 |
C6 |
N2 |
1.290 |
1.302 |
N3 |
C7 |
1.472 |
1.465 |
C2 |
H1 |
1.080 |
1.080 |
C9 |
H2 |
1.100 |
1.090 |
C10 |
H3 |
1.100 |
1.090 |
C10 |
H4 |
1.100 |
1.090 |
C11 |
H5 |
1.100 |
1.091 |
C11 |
H6 |
1.100 |
1.090 |
C17 |
H7 |
1.100 |
1.090 |
C17 |
H8 |
1.100 |
1.090 |
C17 |
H9 |
1.100 |
1.090 |
C14 |
H10 |
1.099 |
1.090 |
C14 |
H11 |
1.099 |
1.091 |
C14 |
H12 |
1.099 |
1.090 |
C7 |
H13 |
1.100 |
1.090 |
C7 |
H14 |
1.100 |
1.090 |
C7 |
H15 |
1.100 |
1.090 |
N2 |
H16 |
1.000 |
0.971 |
C1 |
H18 |
1.080 |
1.080 |
N1 |
H19 |
1.000 |
0.970 |
Bond Angles for 60V
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C17 |
H7 |
109.5 |
109.4 |
O1 |
C17 |
H8 |
109.5 |
109.5 |
O1 |
C17 |
H9 |
109.5 |
109.4 |
O1 |
C16 |
N6 |
120.1 |
120.4 |
C3 |
C2 |
C1 |
113.0 |
113.3 |
C2 |
C1 |
C |
113.3 |
115.1 |
C1 |
C2 |
H1 |
123.5 |
123.3 |
C2 |
C1 |
H18 |
123.4 |
122.4 |
C2 |
C3 |
S |
110.9 |
109.1 |
C3 |
C2 |
H1 |
123.5 |
123.4 |
C15 |
C16 |
N6 |
122.4 |
119.1 |
C16 |
C15 |
F |
119.8 |
120.8 |
C1 |
C |
S |
109.9 |
111.0 |
N6 |
C12 |
N4 |
116.7 |
119.2 |
C3 |
S |
C |
92.9 |
91.6 |
C15 |
C13 |
N5 |
121.4 |
119.3 |
C15 |
C13 |
C14 |
121.6 |
120.4 |
N4 |
C11 |
C5 |
99.7 |
105.5 |
C11 |
N4 |
C12 |
119.8 |
111.0 |
N4 |
C11 |
H5 |
111.9 |
110.3 |
N4 |
C11 |
H6 |
111.8 |
110.3 |
C5 |
C11 |
H5 |
111.8 |
110.5 |
C5 |
C11 |
H6 |
111.9 |
109.9 |
N5 |
C12 |
N4 |
117.5 |
119.2 |
C12 |
N5 |
C13 |
116.3 |
120.9 |
C14 |
C13 |
N5 |
117.0 |
120.4 |
C13 |
C14 |
H10 |
109.5 |
109.5 |
C13 |
C14 |
H11 |
109.5 |
109.5 |
C13 |
C14 |
H12 |
109.5 |
109.5 |
N4 |
C10 |
H3 |
111.0 |
109.9 |
N4 |
C10 |
H4 |
111.0 |
110.0 |
C5 |
C9 |
H2 |
109.1 |
110.8 |
C5 |
N1 |
H19 |
118.4 |
121.2 |
C10 |
C9 |
H2 |
109.2 |
110.2 |
C9 |
C10 |
H3 |
111.0 |
109.8 |
C9 |
C10 |
H4 |
111.0 |
109.8 |
C9 |
C8 |
O |
120.8 |
118.1 |
C9 |
C8 |
N3 |
117.4 |
123.8 |
N1 |
C6 |
N3 |
119.1 |
117.4 |
N1 |
C6 |
N2 |
121.6 |
121.3 |
C6 |
N1 |
H19 |
118.4 |
121.2 |
O |
C8 |
N3 |
121.7 |
118.1 |
C6 |
N3 |
C8 |
122.3 |
120.6 |
C8 |
N3 |
C7 |
117.2 |
119.7 |
N3 |
C6 |
N2 |
119.1 |
121.3 |
C6 |
N3 |
C7 |
120.3 |
119.7 |
C6 |
N2 |
H16 |
112.0 |
120.0 |
N3 |
C7 |
H13 |
109.5 |
109.5 |
N3 |
C7 |
H14 |
109.4 |
109.5 |
N3 |
C7 |
H15 |
109.5 |
109.5 |
H3 |
C10 |
H4 |
109.5 |
109.9 |
H5 |
C11 |
H6 |
109.5 |
110.3 |
H7 |
C17 |
H8 |
109.5 |
109.5 |
H7 |
C17 |
H9 |
109.5 |
109.5 |
H8 |
C17 |
H9 |
109.4 |
109.5 |
H10 |
C14 |
H11 |
109.5 |
109.5 |
H10 |
C14 |
H12 |
109.5 |
109.5 |
H11 |
C14 |
H12 |
109.5 |
109.5 |
H13 |
C7 |
H14 |
109.4 |
109.5 |
H13 |
C7 |
H15 |
109.5 |
109.4 |
H14 |
C7 |
H15 |
109.5 |
109.5 |
Torsion Angles for 60V
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C17 |
O1 |
C16 |
N6 |
22.8 |
0.0 |
H7 |
C17 |
O1 |
H8 |
240.0 |
240.0 |
H7 |
C17 |
O1 |
H9 |
120.0 |
120.0 |
H8 |
C17 |
O1 |
H9 |
240.0 |
240.0 |
C15 |
C16 |
O1 |
N6 |
186.5 |
180.0 |
C1 |
C2 |
C3 |
S |
1.4 |
360.0 |
C3 |
C2 |
C1 |
H1 |
180.0 |
179.8 |
C2 |
C1 |
C |
S |
0.0 |
0.0 |
C3 |
C2 |
C1 |
C |
359.1 |
360.0 |
C1 |
C2 |
C3 |
H1 |
180.0 |
180.2 |
C3 |
C2 |
C1 |
H18 |
179.1 |
180.0 |
C2 |
C3 |
S |
C |
358.9 |
0.0 |
N6 |
C16 |
C15 |
F |
175.7 |
180.0 |
C16 |
N6 |
C12 |
N4 |
176.7 |
180.0 |
O1 |
C16 |
C15 |
N6 |
173.4 |
180.0 |
C16 |
C15 |
C13 |
N5 |
0.6 |
359.7 |
C16 |
C15 |
C13 |
C14 |
180.6 |
179.7 |
C |
C1 |
C2 |
H1 |
179.1 |
180.2 |
C2 |
C1 |
C |
H18 |
180.0 |
180.0 |
C3 |
S |
C |
C1 |
0.6 |
360.0 |
F |
C15 |
C16 |
N6 |
175.7 |
180.0 |
F |
C15 |
C13 |
N5 |
182.6 |
180.0 |
F |
C15 |
C13 |
C14 |
2.6 |
360.0 |
C11 |
N4 |
C12 |
N6 |
4.1 |
359.7 |
N5 |
C12 |
N6 |
N4 |
182.5 |
179.7 |
C4 |
C3 |
C2 |
H1 |
6.3 |
359.7 |
S |
C3 |
C2 |
C1 |
1.4 |
360.0 |
S |
C3 |
C2 |
H1 |
181.3 |
179.8 |
C1 |
C |
S |
C3 |
0.6 |
360.0 |
C12 |
N5 |
C13 |
C15 |
0.9 |
360.0 |
C14 |
C13 |
C15 |
N5 |
180.0 |
180.0 |
C15 |
C13 |
C14 |
H10 |
180.0 |
270.0 |
C15 |
C13 |
C14 |
H11 |
300.0 |
30.0 |
C15 |
C13 |
C14 |
H12 |
60.0 |
150.0 |
N6 |
C12 |
N4 |
C11 |
4.1 |
359.7 |
C5 |
C11 |
N4 |
H5 |
241.6 |
240.7 |
C5 |
C11 |
N4 |
H6 |
118.4 |
118.6 |
N5 |
C12 |
N4 |
C11 |
181.9 |
180.0 |
C11 |
N4 |
C10 |
H3 |
114.4 |
238.6 |
C11 |
N4 |
C10 |
H4 |
236.4 |
117.5 |
H5 |
C11 |
N4 |
H6 |
236.8 |
237.9 |
C5 |
C11 |
N4 |
C12 |
190.3 |
145.9 |
N4 |
C11 |
C5 |
H5 |
118.4 |
119.2 |
N4 |
C11 |
C5 |
H6 |
241.6 |
241.1 |
C11 |
C5 |
C9 |
H2 |
284.2 |
274.5 |
C11 |
C5 |
N1 |
H19 |
30.5 |
17.2 |
H5 |
C11 |
C5 |
H6 |
123.2 |
122.0 |
C2 |
C1 |
C |
C5 |
179.9 |
180.0 |
C3 |
S |
C |
C5 |
180.7 |
180.0 |
C |
C5 |
C11 |
H5 |
80.7 |
85.4 |
C |
C5 |
C11 |
H6 |
317.5 |
323.5 |
C |
C5 |
C9 |
H2 |
42.6 |
35.4 |
C |
C5 |
N1 |
H19 |
265.9 |
252.4 |
C12 |
N4 |
C11 |
C5 |
190.3 |
145.9 |
C12 |
N4 |
C11 |
H5 |
308.6 |
265.2 |
C12 |
N4 |
C11 |
H6 |
71.9 |
27.3 |
N4 |
C12 |
N5 |
C13 |
181.7 |
180.0 |
C12 |
N4 |
C10 |
H3 |
314.4 |
116.1 |
C12 |
N4 |
C10 |
H4 |
76.4 |
355.0 |
N6 |
C12 |
N5 |
N4 |
177.5 |
180.3 |
C15 |
C13 |
N5 |
C12 |
0.9 |
360.0 |
C11 |
N4 |
C12 |
N5 |
181.9 |
180.0 |
C14 |
C13 |
N5 |
C12 |
180.8 |
180.0 |
C15 |
C13 |
N5 |
C14 |
180.0 |
180.0 |
C13 |
N5 |
C12 |
N4 |
181.7 |
180.0 |
N5 |
C13 |
C14 |
H10 |
360.0 |
90.0 |
N5 |
C13 |
C14 |
H11 |
120.0 |
210.0 |
N5 |
C13 |
C14 |
H12 |
240.0 |
330.0 |
C15 |
C13 |
C14 |
N5 |
180.0 |
180.0 |
C12 |
N5 |
C13 |
C14 |
180.8 |
180.0 |
H10 |
C14 |
C13 |
H11 |
240.0 |
240.0 |
H10 |
C14 |
C13 |
H12 |
120.0 |
120.0 |
H11 |
C14 |
C13 |
H12 |
240.0 |
240.0 |
N4 |
C10 |
C9 |
H2 |
93.7 |
98.7 |
C9 |
C10 |
N4 |
H3 |
241.0 |
119.4 |
C9 |
C10 |
N4 |
H4 |
119.0 |
240.5 |
H3 |
C10 |
N4 |
H4 |
237.9 |
121.1 |
C9 |
C5 |
N1 |
H19 |
142.7 |
127.5 |
C10 |
C9 |
C5 |
H2 |
116.0 |
118.2 |
C5 |
C9 |
C10 |
H3 |
218.8 |
99.6 |
C5 |
C9 |
C10 |
H4 |
96.8 |
220.5 |
C6 |
N1 |
C5 |
H19 |
180.0 |
179.7 |
N4 |
C10 |
C9 |
H3 |
119.0 |
240.6 |
N4 |
C10 |
C9 |
H4 |
241.0 |
119.6 |
C5 |
C9 |
C10 |
H2 |
244.0 |
241.4 |
C10 |
C9 |
C8 |
O |
273.1 |
279.1 |
C10 |
C9 |
C8 |
N3 |
92.2 |
99.7 |
H3 |
C10 |
C9 |
H4 |
122.0 |
239.0 |
O |
C8 |
C9 |
N3 |
180.9 |
179.5 |
C6 |
N3 |
C8 |
C9 |
352.3 |
1.7 |
C9 |
C8 |
N3 |
C7 |
176.3 |
181.7 |
C5 |
N1 |
C6 |
H19 |
180.0 |
180.3 |
N1 |
C6 |
N3 |
C8 |
17.6 |
346.1 |
N3 |
C6 |
N1 |
N2 |
175.5 |
180.1 |
N1 |
C6 |
N3 |
C7 |
193.5 |
166.2 |
N1 |
C6 |
N2 |
H16 |
175.5 |
180.0 |
C9 |
C8 |
O |
N3 |
179.1 |
180.5 |
C6 |
N3 |
C8 |
O |
171.4 |
182.3 |
O |
C8 |
N3 |
C7 |
355.4 |
2.2 |
C9 |
C8 |
N3 |
O |
180.9 |
179.5 |
C8 |
N3 |
C6 |
N2 |
193.1 |
166.2 |
C6 |
N3 |
C8 |
C7 |
176.0 |
180.1 |
C8 |
N3 |
C7 |
H13 |
180.0 |
179.9 |
C8 |
N3 |
C7 |
H14 |
300.0 |
300.0 |
C8 |
N3 |
C7 |
H15 |
60.0 |
60.0 |
C9 |
C8 |
N3 |
C6 |
352.3 |
1.7 |
N1 |
C6 |
N3 |
N2 |
184.4 |
179.9 |
N3 |
C6 |
N1 |
H19 |
187.7 |
221.4 |
O |
C8 |
N3 |
C6 |
171.4 |
182.3 |
C8 |
N3 |
C6 |
C7 |
184.1 |
179.9 |
N3 |
C6 |
N2 |
H16 |
360.0 |
359.9 |
C6 |
N3 |
C7 |
H13 |
3.9 |
359.9 |
C6 |
N3 |
C7 |
H14 |
123.9 |
120.0 |
C6 |
N3 |
C7 |
H15 |
243.9 |
239.9 |
N1 |
C6 |
N2 |
N3 |
175.5 |
180.1 |
N2 |
C6 |
N1 |
H19 |
12.3 |
41.3 |
N2 |
C6 |
N3 |
C8 |
193.1 |
166.2 |
N2 |
C6 |
N3 |
C7 |
9.0 |
346.3 |
C6 |
N3 |
C7 |
C8 |
183.9 |
179.9 |
C7 |
N3 |
C6 |
N2 |
9.0 |
346.3 |
H13 |
C7 |
N3 |
H14 |
240.0 |
239.9 |
H13 |
C7 |
N3 |
H15 |
120.0 |
119.9 |
H14 |
C7 |
N3 |
H15 |
240.0 |
240.0 |
C3 |
C2 |
H1 |
C1 |
180.0 |
180.3 |
H1 |
C2 |
C1 |
C |
179.1 |
180.2 |
H1 |
C2 |
C1 |
H18 |
359.1 |
0.2 |
H1 |
C2 |
C3 |
S |
181.3 |
179.8 |
H2 |
C9 |
C10 |
H3 |
334.8 |
218.1 |
H2 |
C9 |
C10 |
H4 |
212.7 |
339.1 |
H2 |
C9 |
C8 |
O |
34.4 |
41.0 |
H2 |
C9 |
C8 |
N3 |
213.5 |
221.6 |
N4 |
C10 |
H3 |
H4 |
123.0 |
238.8 |
H3 |
C10 |
C9 |
H2 |
334.8 |
218.1 |
C9 |
C10 |
H3 |
H4 |
237.1 |
120.9 |
N4 |
C10 |
H4 |
H3 |
237.0 |
121.1 |
H4 |
C10 |
C9 |
H2 |
212.7 |
339.1 |
C9 |
C10 |
H4 |
H3 |
122.9 |
239.1 |
N4 |
C11 |
H5 |
C5 |
249.1 |
243.8 |
H5 |
C11 |
N4 |
C12 |
308.6 |
265.2 |
N4 |
C11 |
H5 |
H6 |
124.5 |
122.1 |
C5 |
C11 |
H5 |
H6 |
235.4 |
238.3 |
N4 |
C11 |
H6 |
C5 |
110.9 |
115.9 |
H6 |
C11 |
N4 |
C12 |
71.9 |
27.3 |
N4 |
C11 |
H6 |
H5 |
235.4 |
237.9 |
C5 |
C11 |
H6 |
H5 |
124.5 |
122.1 |
O1 |
C17 |
H7 |
H8 |
120.0 |
120.0 |
O1 |
C17 |
H7 |
H9 |
240.0 |
240.1 |
H8 |
C17 |
H7 |
H9 |
120.0 |
120.1 |
O1 |
C17 |
H8 |
H7 |
240.0 |
240.0 |
O1 |
C17 |
H8 |
H9 |
120.0 |
120.0 |
H7 |
C17 |
H8 |
H9 |
240.0 |
239.9 |
O1 |
C17 |
H9 |
H7 |
120.0 |
119.9 |
O1 |
C17 |
H9 |
H8 |
240.0 |
240.0 |
H7 |
C17 |
H9 |
H8 |
120.0 |
120.1 |
H10 |
C14 |
C13 |
N5 |
360.0 |
90.0 |
C13 |
C14 |
H10 |
H11 |
120.0 |
120.0 |
C13 |
C14 |
H10 |
H12 |
240.0 |
240.0 |
H11 |
C14 |
H10 |
H12 |
120.0 |
120.0 |
H11 |
C14 |
C13 |
N5 |
120.0 |
210.0 |
C13 |
C14 |
H11 |
H10 |
240.0 |
240.0 |
C13 |
C14 |
H11 |
H12 |
120.0 |
120.0 |
H10 |
C14 |
H11 |
H12 |
240.0 |
240.0 |
H12 |
C14 |
C13 |
N5 |
240.0 |
330.0 |
C13 |
C14 |
H12 |
H10 |
120.0 |
120.0 |
C13 |
C14 |
H12 |
H11 |
240.0 |
240.0 |
H10 |
C14 |
H12 |
H11 |
120.0 |
120.0 |
N3 |
C7 |
H13 |
H14 |
120.0 |
120.1 |
N3 |
C7 |
H13 |
H15 |
240.0 |
240.0 |
H14 |
C7 |
H13 |
H15 |
120.0 |
120.0 |
N3 |
C7 |
H14 |
H13 |
240.0 |
239.9 |
N3 |
C7 |
H14 |
H15 |
120.0 |
120.0 |
H13 |
C7 |
H14 |
H15 |
240.0 |
240.0 |
N3 |
C7 |
H15 |
H13 |
120.1 |
120.0 |
N3 |
C7 |
H15 |
H14 |
240.0 |
240.0 |
H13 |
C7 |
H15 |
H14 |
120.0 |
120.0 |
C2 |
C1 |
H18 |
C |
180.0 |
180.0 |
H18 |
C1 |
C2 |
H1 |
359.1 |
0.2 |
H18 |
C1 |
C |
S |
180.0 |
180.0 |
H19 |
N1 |
C6 |
N3 |
187.7 |
221.4 |
H19 |
N1 |
C6 |
N2 |
12.3 |
41.3 |