PDB Chemical Component 60T
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 60T
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C4 |
O |
1.436 |
1.429 |
C14 |
C15 |
1.388 |
1.383 |
C14 |
C13 |
1.375 |
1.384 |
O |
C3 |
1.349 |
1.356 |
F1 |
C13 |
1.347 |
1.351 |
C15 |
C16 |
1.386 |
1.381 |
C13 |
C12 |
1.419 |
1.385 |
C3 |
N1 |
1.321 |
1.328 |
C3 |
C |
1.382 |
1.396 |
F |
C |
1.343 |
1.351 |
N1 |
C2 |
1.348 |
1.324 |
C |
C1 |
1.400 |
1.383 |
C16 |
C17 |
1.376 |
1.385 |
C5 |
N2 |
1.461 |
1.478 |
C5 |
C6 |
1.535 |
1.548 |
C12 |
C17 |
1.425 |
1.384 |
C12 |
C6 |
1.543 |
1.507 |
C2 |
N2 |
1.364 |
1.386 |
C2 |
N |
1.346 |
1.324 |
C17 |
F2 |
1.343 |
1.351 |
C1 |
N |
1.345 |
1.325 |
C1 |
C18 |
1.501 |
1.508 |
N2 |
C11 |
1.474 |
1.474 |
C6 |
C10 |
1.562 |
1.544 |
C6 |
N3 |
1.475 |
1.470 |
C10 |
C11 |
1.541 |
1.539 |
C10 |
C9 |
1.521 |
1.495 |
N3 |
C7 |
1.343 |
1.382 |
C9 |
O1 |
1.220 |
1.213 |
C9 |
N5 |
1.381 |
1.340 |
C7 |
N5 |
1.382 |
1.385 |
C7 |
N4 |
1.294 |
1.302 |
N5 |
C8 |
1.474 |
1.465 |
C4 |
H1 |
1.100 |
1.090 |
C4 |
H2 |
1.100 |
1.091 |
C4 |
H3 |
1.100 |
1.090 |
C5 |
H4 |
1.100 |
1.089 |
C5 |
H5 |
1.100 |
1.090 |
N4 |
H6 |
1.000 |
0.971 |
C8 |
H8 |
1.100 |
1.090 |
C8 |
H9 |
1.100 |
1.090 |
C8 |
H10 |
1.100 |
1.089 |
C10 |
H11 |
1.100 |
1.089 |
C16 |
H12 |
1.080 |
1.080 |
C15 |
H13 |
1.081 |
1.080 |
C14 |
H14 |
1.080 |
1.079 |
C11 |
H15 |
1.100 |
1.091 |
C11 |
H16 |
1.100 |
1.090 |
C18 |
H17 |
1.100 |
1.090 |
C18 |
H18 |
1.100 |
1.090 |
C18 |
H19 |
1.100 |
1.089 |
N3 |
H20 |
1.000 |
0.970 |
Bond Angles for 60T
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O |
C4 |
H1 |
109.5 |
109.5 |
O |
C4 |
H2 |
109.5 |
109.4 |
O |
C4 |
H3 |
109.5 |
109.5 |
C14 |
C15 |
H13 |
119.5 |
119.9 |
C14 |
C13 |
C12 |
124.4 |
120.0 |
C13 |
C14 |
H14 |
120.7 |
120.0 |
F1 |
C13 |
C12 |
117.2 |
120.0 |
C15 |
C16 |
H12 |
120.7 |
120.0 |
N1 |
C3 |
C |
122.4 |
119.1 |
N1 |
C2 |
N2 |
117.0 |
119.2 |
N1 |
C2 |
N |
125.7 |
121.7 |
C6 |
C5 |
N2 |
101.6 |
105.1 |
C2 |
N2 |
C5 |
118.4 |
111.0 |
C5 |
N2 |
C11 |
112.9 |
108.6 |
N2 |
C5 |
H4 |
111.4 |
110.3 |
N2 |
C5 |
H5 |
111.4 |
110.3 |
C5 |
C6 |
C10 |
102.3 |
102.2 |
C5 |
C6 |
N3 |
108.6 |
108.1 |
C6 |
C5 |
H4 |
111.4 |
110.3 |
C6 |
C5 |
H5 |
111.4 |
110.3 |
N2 |
C2 |
N |
117.3 |
119.1 |
C2 |
N2 |
C11 |
126.6 |
111.0 |
C1 |
N |
C2 |
116.5 |
120.9 |
N |
C1 |
C18 |
116.9 |
120.4 |
C1 |
C18 |
H17 |
109.5 |
109.5 |
C1 |
C18 |
H18 |
109.4 |
109.5 |
C1 |
C18 |
H19 |
109.4 |
109.5 |
N2 |
C11 |
C10 |
103.6 |
107.4 |
N2 |
C11 |
H15 |
110.9 |
109.8 |
N2 |
C11 |
H16 |
110.9 |
109.9 |
N3 |
C6 |
C10 |
104.7 |
108.9 |
C6 |
C10 |
C11 |
103.4 |
103.8 |
C6 |
C10 |
C9 |
113.9 |
111.5 |
C6 |
C10 |
H11 |
108.8 |
110.2 |
C6 |
N3 |
C7 |
123.5 |
117.6 |
C6 |
N3 |
H20 |
118.3 |
121.2 |
C9 |
C10 |
C11 |
112.0 |
110.3 |
C11 |
C10 |
H11 |
109.1 |
110.2 |
C10 |
C11 |
H15 |
110.9 |
109.8 |
C10 |
C11 |
H16 |
110.9 |
109.9 |
C10 |
C9 |
O1 |
121.1 |
118.1 |
C10 |
C9 |
N5 |
117.2 |
123.8 |
C9 |
C10 |
H11 |
109.3 |
110.6 |
N3 |
C7 |
N5 |
119.2 |
117.5 |
N3 |
C7 |
N4 |
122.0 |
121.3 |
O1 |
C9 |
N5 |
121.7 |
118.1 |
C7 |
N5 |
C9 |
121.8 |
120.6 |
N4 |
C7 |
N5 |
118.7 |
121.3 |
C7 |
N5 |
C8 |
120.2 |
119.8 |
C7 |
N4 |
H6 |
112.0 |
120.0 |
N5 |
C8 |
H8 |
109.5 |
109.5 |
N5 |
C8 |
H9 |
109.5 |
109.5 |
N5 |
C8 |
H10 |
109.5 |
109.5 |
H1 |
C4 |
H2 |
109.5 |
109.4 |
H1 |
C4 |
H3 |
109.5 |
109.5 |
H2 |
C4 |
H3 |
109.5 |
109.5 |
H4 |
C5 |
H5 |
109.5 |
110.3 |
H8 |
C8 |
H9 |
109.4 |
109.4 |
H8 |
C8 |
H10 |
109.5 |
109.5 |
H9 |
C8 |
H10 |
109.5 |
109.5 |
H15 |
C11 |
H16 |
109.5 |
110.0 |
H17 |
C18 |
H18 |
109.5 |
109.5 |
H17 |
C18 |
H19 |
109.5 |
109.5 |
H18 |
C18 |
H19 |
109.5 |
109.5 |
Torsion Angles for 60T
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H1 |
C4 |
O |
H2 |
240.0 |
240.0 |
H1 |
C4 |
O |
H3 |
120.0 |
120.0 |
H2 |
C4 |
O |
H3 |
240.0 |
240.0 |
C14 |
C15 |
C16 |
H12 |
178.9 |
180.0 |
C13 |
C14 |
C15 |
H13 |
180.7 |
180.0 |
F1 |
C13 |
C14 |
C12 |
183.3 |
180.3 |
C14 |
C13 |
F1 |
C12 |
176.9 |
179.7 |
F1 |
C13 |
C14 |
H14 |
4.0 |
360.0 |
C12 |
C13 |
C14 |
H14 |
180.7 |
179.7 |
C3 |
N1 |
C2 |
N2 |
176.3 |
180.5 |
C3 |
N1 |
C2 |
N |
359.4 |
0.5 |
N1 |
C2 |
N2 |
C5 |
3.2 |
360.0 |
N2 |
C2 |
N1 |
N |
177.0 |
180.0 |
N1 |
C2 |
N2 |
C11 |
165.4 |
120.8 |
C1 |
N |
C2 |
N1 |
358.6 |
0.0 |
C |
C1 |
C18 |
H17 |
179.6 |
270.3 |
C |
C1 |
C18 |
H18 |
299.6 |
30.2 |
C |
C1 |
C18 |
H19 |
59.6 |
150.2 |
N2 |
C5 |
C6 |
C10 |
321.7 |
324.9 |
N2 |
C5 |
C6 |
N3 |
72.0 |
79.7 |
C6 |
C5 |
N2 |
H4 |
241.3 |
119.0 |
C6 |
C5 |
N2 |
H5 |
118.7 |
241.1 |
C5 |
N2 |
C2 |
N |
180.4 |
180.0 |
C2 |
N2 |
C5 |
C11 |
164.5 |
122.3 |
C5 |
N2 |
C11 |
C10 |
357.4 |
357.7 |
C5 |
N2 |
C11 |
H15 |
116.5 |
117.2 |
C5 |
N2 |
C11 |
H16 |
238.4 |
238.3 |
H4 |
C5 |
N2 |
H5 |
237.4 |
122.1 |
C2 |
N2 |
C5 |
C6 |
190.7 |
145.9 |
C6 |
C5 |
N2 |
C11 |
26.2 |
23.6 |
N2 |
C5 |
C6 |
H4 |
118.7 |
241.1 |
N2 |
C5 |
C6 |
H5 |
241.3 |
118.9 |
N3 |
C6 |
C5 |
C10 |
110.3 |
114.8 |
C5 |
C6 |
C10 |
C11 |
37.6 |
33.1 |
C5 |
C6 |
C10 |
C9 |
159.5 |
151.8 |
C5 |
C6 |
C10 |
H11 |
281.7 |
275.0 |
C5 |
C6 |
N3 |
C7 |
207.1 |
197.0 |
C5 |
C6 |
N3 |
H20 |
27.1 |
16.9 |
H4 |
C5 |
C6 |
H5 |
122.6 |
237.8 |
C12 |
C6 |
C5 |
H4 |
80.4 |
323.4 |
C12 |
C6 |
C5 |
H5 |
317.8 |
85.6 |
C12 |
C6 |
C10 |
C11 |
157.3 |
153.6 |
C12 |
C6 |
C10 |
C9 |
279.1 |
272.3 |
C12 |
C6 |
C10 |
H11 |
41.4 |
35.6 |
C12 |
C6 |
N3 |
H20 |
262.8 |
252.3 |
N1 |
C2 |
N2 |
N |
182.8 |
180.0 |
C6 |
C5 |
N2 |
C2 |
190.7 |
145.9 |
C5 |
N2 |
C2 |
C11 |
197.8 |
239.2 |
C2 |
N2 |
C5 |
H4 |
309.4 |
26.9 |
C2 |
N2 |
C5 |
H5 |
72.0 |
264.8 |
C1 |
N |
C2 |
N2 |
181.7 |
180.0 |
C2 |
N2 |
C11 |
C10 |
194.5 |
235.5 |
C2 |
N2 |
C11 |
H15 |
313.5 |
354.9 |
C2 |
N2 |
C11 |
H16 |
75.4 |
116.0 |
N1 |
C2 |
N |
N2 |
176.9 |
180.0 |
N |
C2 |
N2 |
C5 |
180.4 |
180.0 |
N |
C2 |
N2 |
C11 |
342.6 |
300.9 |
C2 |
N |
C1 |
C18 |
180.8 |
180.0 |
N1 |
C2 |
N |
C1 |
358.6 |
0.0 |
N2 |
C2 |
N |
C1 |
181.7 |
180.0 |
N |
C1 |
C18 |
H17 |
0.0 |
90.1 |
N |
C1 |
C18 |
H18 |
120.0 |
210.0 |
N |
C1 |
C18 |
H19 |
240.0 |
330.0 |
C18 |
C1 |
N |
C2 |
180.8 |
180.0 |
H17 |
C18 |
C1 |
H18 |
240.0 |
240.0 |
H17 |
C18 |
C1 |
H19 |
120.0 |
120.0 |
H18 |
C18 |
C1 |
H19 |
240.0 |
240.0 |
C2 |
N2 |
C11 |
C5 |
197.0 |
237.8 |
C11 |
N2 |
C5 |
H4 |
144.9 |
264.6 |
C11 |
N2 |
C5 |
H5 |
267.5 |
142.5 |
C11 |
N2 |
C2 |
N |
342.6 |
300.9 |
C6 |
C10 |
C11 |
N2 |
338.1 |
340.1 |
C9 |
C10 |
C11 |
N2 |
215.0 |
220.6 |
N2 |
C11 |
C10 |
H11 |
93.8 |
98.1 |
C10 |
C11 |
N2 |
H15 |
240.9 |
240.6 |
C10 |
C11 |
N2 |
H16 |
119.1 |
119.5 |
H15 |
C11 |
N2 |
H16 |
238.1 |
238.9 |
C10 |
C6 |
C5 |
N2 |
321.7 |
324.9 |
C5 |
C6 |
C10 |
N3 |
113.3 |
114.2 |
C10 |
C6 |
C5 |
H4 |
203.0 |
83.9 |
C10 |
C6 |
C5 |
H5 |
80.4 |
206.0 |
N2 |
C11 |
C10 |
C6 |
338.1 |
340.1 |
C10 |
C6 |
N3 |
C7 |
315.8 |
307.3 |
C10 |
C6 |
N3 |
H20 |
135.8 |
127.2 |
C9 |
C10 |
C6 |
C11 |
121.8 |
118.7 |
C11 |
C10 |
C6 |
H11 |
115.9 |
118.0 |
C6 |
C10 |
C11 |
H15 |
219.0 |
220.7 |
C6 |
C10 |
C11 |
H16 |
97.1 |
99.6 |
C6 |
C10 |
C9 |
O1 |
154.9 |
164.3 |
C6 |
C10 |
C9 |
N5 |
335.6 |
344.4 |
C9 |
C10 |
C6 |
H11 |
237.7 |
236.8 |
N3 |
C6 |
C5 |
N2 |
72.0 |
79.7 |
C5 |
C6 |
N3 |
C10 |
251.3 |
249.7 |
N3 |
C6 |
C5 |
H4 |
313.4 |
198.6 |
N3 |
C6 |
C5 |
H5 |
190.8 |
320.8 |
N3 |
C6 |
C10 |
C11 |
284.4 |
278.8 |
N3 |
C6 |
C10 |
C9 |
46.2 |
37.6 |
N3 |
C6 |
C10 |
H11 |
168.5 |
160.8 |
C6 |
N3 |
C7 |
N5 |
14.9 |
41.4 |
C6 |
N3 |
C7 |
N4 |
196.5 |
221.3 |
N2 |
C11 |
C10 |
H15 |
119.1 |
119.4 |
N2 |
C11 |
C10 |
H16 |
240.9 |
240.5 |
C6 |
C10 |
C11 |
C9 |
123.1 |
119.6 |
C6 |
C10 |
C11 |
H11 |
244.3 |
242.0 |
C11 |
C10 |
C9 |
O1 |
271.8 |
279.1 |
C11 |
C10 |
C9 |
N5 |
92.5 |
99.2 |
C9 |
C10 |
C11 |
H11 |
121.2 |
122.5 |
H15 |
C11 |
C10 |
H16 |
121.9 |
121.1 |
N2 |
C11 |
C10 |
C9 |
215.0 |
220.6 |
C6 |
C10 |
C9 |
C11 |
243.1 |
245.2 |
C6 |
C10 |
C9 |
H11 |
122.0 |
123.0 |
C11 |
C10 |
C9 |
H11 |
238.9 |
237.8 |
C9 |
C10 |
C11 |
H15 |
95.9 |
101.2 |
C9 |
C10 |
C11 |
H16 |
334.0 |
340.1 |
O1 |
C9 |
C10 |
N5 |
179.3 |
180.0 |
C7 |
N5 |
C9 |
C10 |
351.3 |
2.2 |
C7 |
N3 |
C6 |
C10 |
315.8 |
307.3 |
C6 |
N3 |
C7 |
H20 |
180.0 |
179.9 |
N3 |
C7 |
N5 |
C9 |
15.5 |
346.2 |
N4 |
C7 |
N3 |
N5 |
181.5 |
179.9 |
N3 |
C7 |
N5 |
C8 |
186.2 |
166.2 |
N3 |
C7 |
N4 |
H6 |
178.5 |
180.0 |
O1 |
C9 |
C10 |
C11 |
271.8 |
279.1 |
C10 |
C9 |
O1 |
N5 |
180.8 |
180.0 |
O1 |
C9 |
C10 |
H11 |
32.9 |
41.4 |
C7 |
N5 |
C9 |
O1 |
172.1 |
182.3 |
N5 |
C9 |
C10 |
C11 |
92.5 |
99.2 |
C10 |
C9 |
N5 |
O1 |
179.3 |
180.0 |
N5 |
C9 |
C10 |
H11 |
213.6 |
221.4 |
N4 |
C7 |
N5 |
C9 |
194.0 |
166.2 |
C7 |
N5 |
C9 |
C8 |
171.0 |
180.0 |
C9 |
N5 |
C8 |
H8 |
180.0 |
180.0 |
C9 |
N5 |
C8 |
H9 |
300.0 |
300.0 |
C9 |
N5 |
C8 |
H10 |
60.0 |
60.0 |
C10 |
C9 |
N5 |
C7 |
351.3 |
2.2 |
N3 |
C7 |
N5 |
N4 |
181.5 |
179.9 |
O1 |
C9 |
N5 |
C7 |
172.1 |
182.3 |
N5 |
C7 |
N4 |
H6 |
0.0 |
359.9 |
C7 |
N5 |
C8 |
H8 |
8.8 |
0.1 |
C7 |
N5 |
C8 |
H9 |
128.8 |
120.0 |
C7 |
N5 |
C8 |
H10 |
248.8 |
240.0 |
N3 |
C7 |
N4 |
N5 |
178.5 |
180.1 |
N4 |
C7 |
N5 |
C8 |
4.7 |
346.2 |
C7 |
N5 |
C8 |
C9 |
188.9 |
180.0 |
H8 |
C8 |
N5 |
H9 |
240.0 |
240.1 |
H8 |
C8 |
N5 |
H10 |
120.0 |
120.1 |
H9 |
C8 |
N5 |
H10 |
240.0 |
240.0 |
O |
C4 |
H1 |
H2 |
120.0 |
120.0 |
O |
C4 |
H1 |
H3 |
240.0 |
240.0 |
H2 |
C4 |
H1 |
H3 |
120.0 |
120.0 |
O |
C4 |
H2 |
H1 |
240.0 |
240.0 |
O |
C4 |
H2 |
H3 |
120.0 |
120.0 |
H1 |
C4 |
H2 |
H3 |
240.0 |
240.0 |
O |
C4 |
H3 |
H1 |
120.0 |
120.0 |
O |
C4 |
H3 |
H2 |
240.0 |
240.0 |
H1 |
C4 |
H3 |
H2 |
120.0 |
120.0 |
C6 |
C5 |
H4 |
N2 |
112.6 |
244.3 |
H4 |
C5 |
N2 |
C11 |
144.9 |
264.6 |
N2 |
C5 |
H4 |
H5 |
123.7 |
237.9 |
H4 |
C5 |
C6 |
C10 |
203.0 |
83.9 |
H4 |
C5 |
C6 |
N3 |
313.4 |
198.6 |
C6 |
C5 |
H4 |
H5 |
236.3 |
122.2 |
C6 |
C5 |
H5 |
N2 |
247.3 |
115.7 |
H5 |
C5 |
N2 |
C11 |
267.5 |
142.5 |
N2 |
C5 |
H5 |
H4 |
236.4 |
122.1 |
H5 |
C5 |
C6 |
C10 |
80.4 |
206.0 |
H5 |
C5 |
C6 |
N3 |
190.8 |
320.8 |
C6 |
C5 |
H5 |
H4 |
123.7 |
237.8 |
H6 |
N4 |
C7 |
N5 |
0.0 |
359.9 |
N5 |
C8 |
H8 |
H9 |
120.0 |
120.0 |
N5 |
C8 |
H8 |
H10 |
240.0 |
239.9 |
H9 |
C8 |
H8 |
H10 |
120.0 |
120.0 |
N5 |
C8 |
H9 |
H8 |
240.0 |
240.1 |
N5 |
C8 |
H9 |
H10 |
120.0 |
120.0 |
H8 |
C8 |
H9 |
H10 |
240.0 |
240.0 |
N5 |
C8 |
H10 |
H8 |
120.0 |
120.0 |
N5 |
C8 |
H10 |
H9 |
240.0 |
240.0 |
H8 |
C8 |
H10 |
H9 |
120.0 |
120.0 |
C6 |
C10 |
H11 |
C11 |
112.2 |
114.0 |
C6 |
C10 |
H11 |
C9 |
235.0 |
236.3 |
C9 |
C10 |
H11 |
C11 |
237.2 |
237.7 |
H11 |
C10 |
C11 |
H15 |
334.7 |
338.7 |
H11 |
C10 |
C11 |
H16 |
212.8 |
217.6 |
H11 |
C10 |
C9 |
O1 |
32.9 |
41.4 |
H11 |
C10 |
C9 |
N5 |
213.6 |
221.4 |
H13 |
C15 |
C16 |
H12 |
358.9 |
360.0 |
H14 |
C14 |
C15 |
H13 |
0.7 |
0.1 |
H14 |
C14 |
C13 |
C12 |
180.7 |
179.7 |
N2 |
C11 |
H15 |
C10 |
245.4 |
242.1 |
N2 |
C11 |
H15 |
H16 |
122.7 |
121.0 |
H15 |
C11 |
C10 |
H11 |
334.7 |
338.7 |
C10 |
C11 |
H15 |
H16 |
237.3 |
238.9 |
N2 |
C11 |
H16 |
C10 |
114.6 |
118.0 |
N2 |
C11 |
H16 |
H15 |
237.3 |
239.0 |
H16 |
C11 |
C10 |
H11 |
212.8 |
217.6 |
C10 |
C11 |
H16 |
H15 |
122.7 |
121.0 |
C1 |
C18 |
H17 |
H18 |
120.0 |
120.0 |
C1 |
C18 |
H17 |
H19 |
240.0 |
240.0 |
H18 |
C18 |
H17 |
H19 |
120.0 |
120.0 |
C1 |
C18 |
H18 |
H17 |
240.0 |
240.0 |
C1 |
C18 |
H18 |
H19 |
119.9 |
120.0 |
H17 |
C18 |
H18 |
H19 |
240.0 |
240.0 |
C1 |
C18 |
H19 |
H17 |
120.0 |
120.0 |
C1 |
C18 |
H19 |
H18 |
240.1 |
240.0 |
H17 |
C18 |
H19 |
H18 |
120.0 |
120.0 |
H20 |
N3 |
C6 |
C10 |
135.8 |
127.2 |
C6 |
N3 |
H20 |
C7 |
180.0 |
180.1 |
H20 |
N3 |
C7 |
N5 |
194.9 |
221.4 |
H20 |
N3 |
C7 |
N4 |
16.4 |
41.4 |