PDB Chemical Component 60K
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 60K
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
S |
1.585 |
1.656 |
O1 |
S |
1.446 |
1.421 |
S |
O2 |
1.439 |
1.421 |
S |
C1 |
1.763 |
1.762 |
C1 |
C2 |
1.388 |
1.383 |
C1 |
C15 |
1.381 |
1.383 |
HN1 |
N1 |
1.000 |
0.970 |
N1 |
HN1A |
1.000 |
0.970 |
H2 |
C2 |
1.080 |
1.080 |
C2 |
C3 |
1.384 |
1.380 |
C4 |
N2 |
1.390 |
1.395 |
N2 |
N3 |
1.296 |
1.290 |
N2 |
HN2 |
1.000 |
0.970 |
H3 |
C3 |
1.080 |
1.080 |
C3 |
C4 |
1.390 |
1.390 |
N3 |
C5 |
1.323 |
1.315 |
C6 |
O3 |
1.231 |
1.217 |
C14 |
C4 |
1.386 |
1.390 |
C6 |
N4 |
1.355 |
1.343 |
C7 |
N4 |
1.389 |
1.385 |
N4 |
HN4 |
1.000 |
0.971 |
O4 |
C11 |
1.229 |
1.214 |
C5 |
C13 |
1.426 |
1.482 |
C5 |
C6 |
1.508 |
1.472 |
HO5 |
O5 |
0.950 |
0.968 |
C11 |
O5 |
1.305 |
1.348 |
C13 |
C7 |
1.411 |
1.404 |
C7 |
C8 |
1.390 |
1.394 |
C9 |
C8 |
1.383 |
1.376 |
C8 |
H8 |
1.080 |
1.080 |
C10 |
C9 |
1.397 |
1.399 |
C9 |
H9 |
1.080 |
1.080 |
C11 |
C10 |
1.485 |
1.475 |
C12 |
C10 |
1.393 |
1.396 |
H12 |
C12 |
1.080 |
1.080 |
C12 |
C13 |
1.386 |
1.385 |
C15 |
C14 |
1.379 |
1.380 |
C14 |
H14 |
1.079 |
1.080 |
H15 |
C15 |
1.080 |
1.081 |
Bond Angles for 60K
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N1 |
S |
O2 |
108.8 |
106.4 |
O1 |
S |
O2 |
117.5 |
123.2 |
C1 |
S |
O2 |
107.0 |
106.4 |
S |
C1 |
C2 |
120.8 |
119.9 |
S |
C1 |
C15 |
118.3 |
119.9 |
C2 |
C1 |
C15 |
120.8 |
120.2 |
C1 |
C2 |
C3 |
119.3 |
120.0 |
C1 |
C15 |
C14 |
119.5 |
120.1 |
HN1 |
N1 |
HN1A |
109.4 |
120.0 |
C2 |
C3 |
C4 |
120.2 |
119.9 |
C4 |
N2 |
HN2 |
119.7 |
120.0 |
N3 |
N2 |
HN2 |
119.7 |
120.0 |
N2 |
N3 |
C5 |
118.1 |
120.0 |
N3 |
C5 |
C13 |
125.8 |
127.5 |
N3 |
C5 |
C6 |
127.9 |
127.5 |
C6 |
N4 |
HN4 |
124.3 |
124.2 |
C7 |
N4 |
HN4 |
124.3 |
124.2 |
O4 |
C11 |
O5 |
123.5 |
120.0 |
O4 |
C11 |
C10 |
120.5 |
120.0 |
C6 |
C5 |
C13 |
106.2 |
105.0 |
C5 |
C13 |
C7 |
107.2 |
106.3 |
C5 |
C13 |
C12 |
133.9 |
133.2 |
C7 |
C8 |
H8 |
120.7 |
119.9 |
C9 |
C8 |
H8 |
120.7 |
119.8 |
C10 |
C9 |
H9 |
119.5 |
119.8 |
C15 |
C14 |
H14 |
119.7 |
120.0 |
Torsion Angles for 60K
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
S |
N1 |
O2 |
127.7 |
132.9 |
C1 |
S |
N1 |
O2 |
243.8 |
246.5 |
N1 |
S |
C1 |
C2 |
347.8 |
90.0 |
N1 |
S |
C1 |
C15 |
167.1 |
269.7 |
N1 |
S |
O1 |
O2 |
237.6 |
237.0 |
C1 |
S |
O1 |
O2 |
120.8 |
122.9 |
O1 |
S |
C1 |
C2 |
103.2 |
203.6 |
O1 |
S |
C1 |
C15 |
282.5 |
23.3 |
O2 |
S |
C1 |
C2 |
230.4 |
336.5 |
O2 |
S |
C1 |
C15 |
49.7 |
156.2 |
N1 |
S |
C1 |
O2 |
117.4 |
113.5 |
O1 |
S |
C1 |
O2 |
232.8 |
227.1 |
C2 |
C1 |
S |
C15 |
180.7 |
180.3 |
S |
C1 |
C2 |
C3 |
178.7 |
180.0 |
S |
C1 |
C15 |
C14 |
180.3 |
179.7 |
C2 |
C1 |
S |
O2 |
230.4 |
336.5 |
S |
C1 |
C2 |
C15 |
179.3 |
179.7 |
C2 |
C1 |
C15 |
C14 |
359.6 |
359.4 |
C1 |
C2 |
C3 |
C4 |
360.0 |
360.0 |
C15 |
C1 |
S |
O2 |
49.7 |
156.2 |
S |
C1 |
C15 |
C2 |
180.7 |
180.3 |
C15 |
C1 |
C2 |
C3 |
359.5 |
0.3 |
C1 |
C15 |
C14 |
H14 |
181.9 |
180.3 |
HN1A |
N1 |
S |
O2 |
172.2 |
353.5 |
C3 |
C2 |
C1 |
C15 |
359.5 |
0.3 |
C2 |
C3 |
C4 |
N2 |
185.5 |
180.0 |
N3 |
N2 |
C4 |
HN2 |
180.0 |
180.0 |
C4 |
N2 |
N3 |
C5 |
189.3 |
180.0 |
C4 |
N2 |
N3 |
HN2 |
180.0 |
180.0 |
N2 |
N3 |
C5 |
C13 |
173.7 |
180.0 |
N2 |
N3 |
C5 |
C6 |
359.2 |
359.8 |
HN2 |
N2 |
N3 |
C5 |
9.3 |
359.9 |
C3 |
C4 |
N2 |
HN2 |
171.4 |
0.0 |
C5 |
N3 |
N2 |
HN2 |
9.3 |
359.9 |
C6 |
C5 |
N3 |
C13 |
185.5 |
179.8 |
N3 |
C5 |
C13 |
C7 |
187.7 |
179.9 |
N3 |
C5 |
C13 |
C12 |
4.6 |
360.0 |
N3 |
C5 |
C6 |
O3 |
349.6 |
0.0 |
C1 |
C15 |
C14 |
C4 |
1.9 |
0.5 |
C14 |
C4 |
N2 |
HN2 |
355.4 |
180.0 |
N3 |
C5 |
C6 |
N4 |
172.7 |
180.0 |
C7 |
N4 |
C6 |
HN4 |
180.0 |
180.2 |
C6 |
N4 |
C7 |
HN4 |
180.0 |
179.8 |
N3 |
C5 |
C13 |
C6 |
184.5 |
179.9 |
N3 |
C5 |
C6 |
C13 |
175.4 |
180.1 |
C5 |
C6 |
N4 |
HN4 |
181.1 |
180.0 |
C6 |
C5 |
C13 |
C7 |
3.2 |
0.0 |
C6 |
C5 |
C13 |
C12 |
180.1 |
180.1 |
O4 |
C11 |
O5 |
C10 |
178.0 |
180.0 |
C13 |
C7 |
N4 |
HN4 |
180.9 |
180.0 |
C5 |
C13 |
C7 |
C12 |
177.4 |
180.1 |
C13 |
C7 |
C8 |
H8 |
182.2 |
180.0 |
C8 |
C7 |
N4 |
HN4 |
3.0 |
359.9 |
C5 |
C13 |
C7 |
C8 |
175.5 |
180.1 |
C9 |
C8 |
C7 |
H8 |
180.0 |
180.0 |
C7 |
C8 |
C9 |
H8 |
180.0 |
180.0 |
O4 |
C11 |
C10 |
C9 |
188.5 |
180.0 |
C10 |
C9 |
C8 |
H8 |
179.7 |
180.0 |
H9 |
C9 |
C8 |
H8 |
359.7 |
359.9 |
O4 |
C11 |
C10 |
O5 |
181.9 |
180.0 |
C11 |
C10 |
C9 |
H9 |
353.3 |
0.1 |
C5 |
C13 |
C12 |
C10 |
183.2 |
179.8 |
C12 |
C10 |
C9 |
H9 |
178.2 |
180.0 |
C5 |
C13 |
C12 |
C7 |
183.4 |
179.9 |