PDB Chemical Component 607

Ideal Model

Chemical Description

Name 2-(2'-AMINO-5-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-6-OXIDO-1,1'-BIPHENYL-3-YL)SUCCINATE
Synonyms CRA_18607
Formula C24 H19 N5 O5
Formal charge -2
Molecular weight 457.438 g/mol
Component type NON-POLYMER

Chemical features

Atom count 53
Chiral atom count 1
Chiral atoms CVX
Bond count 56
Aromatic bond count 24

Chemical Identifiers

Systematic name (ACDLabs) (2R)-2-(2'-amino-5-{5-[amino(iminio)methyl]-1H-benzimidazol-2-yl}-6-oxidobiphenyl-3-yl)butanedioate
Systematic name (OpenEye OEToolkits) (2R)-2-[3-[5-(amino-azaniumylidene-methyl)-1H-benzimidazol-2-yl]-5-(2-aminophenyl)-4-oxido-phenyl]butanedioate

Chemical Descriptors

Stereo SMILES (CACTVS) NC(=[NH2+])c1ccc2[nH]c(nc2c1)c3cc(cc(c3[O-])c4ccccc4N)[C@@H](CC([O-])=O)C([O-])=O
SMILES (CACTVS) NC(=[NH2+])c1ccc2[nH]c(nc2c1)c3cc(cc(c3[O-])c4ccccc4N)[CH](CC([O-])=O)C([O-])=O
Stereo SMILES (OpenEye) c1ccc(c(c1)c2cc(cc(c2[O-])c3[nH]c4ccc(cc4n3)C(=[NH2+])N)[C@@H](CC(=O)[O-])C(=O)[O-])N
InChI descriptor InChI=1S/C24H21N5O5/c25-17-4-2-1-3-13(17)15-7-12(14(24(33)34)10-20(30)31)8-16(21(15)32)23-28-18-6-5-11(22(26)27)9-19(18)29-23/h1-9,14,32H,10,25H2,(H3,26,27)(H,28,29)(H,30,31)(H,33,34)/p-2/t14-/m1/s1
InChIKey descriptor KLIWSPNZLMZLEF-CQSZACIVSA-L

Status Information

Last modified 2021-03-01
Created 2003-03-14
Release status REL
Model PDB code 1O36
Processing site RCSB