PDB Chemical Component 5X

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5X

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
S19	O20	1.443	1.422
S19	O21	1.435	1.421
S19	N22	1.760	1.655
S19	C24	1.787	1.762
N22	N1	1.503	1.401
N22	H22	1.000	0.970
C24	C25	1.415	1.382
C24	C30	1.411	1.383
C25	C26	1.408	1.382
C25	H25	1.080	1.080
C26	C27	1.406	1.382
C26	H26	1.080	1.080
C27	C29	1.407	1.383
C27	H27	1.080	1.080
C29	C30	1.404	1.382
C29	H29	1.080	1.080
C30	H30	1.080	1.080
C1	C2	1.532	1.507
C1	C14	1.576	1.530
C1	H11A	1.100	1.090
C1	H12	1.100	1.090
C2	C3	1.363	1.326
C2	C4	1.522	1.507
N1	C9	1.331	1.334
N1	C7	1.327	1.323
C9	S1	1.764	1.773
C9	S2	1.678	1.712
C14	C7	1.533	1.513
C14	S1	1.759	1.824
C14	H14	1.100	1.090
C7	O1	1.249	1.213
C3	C5	1.507	1.478
C3	H3	1.079	1.080
C4	H41	1.100	1.090
C4	H42	1.100	1.090
C4	H43	1.100	1.090
C5	C6	1.413	1.395
C5	C8	1.415	1.395
C6	C11	1.395	1.380
C6	H6	1.080	1.079
C8	C10	1.397	1.379
C8	H8	1.080	1.080
C10	C13	1.404	1.383
C10	H10	1.080	1.081
C11	C13	1.405	1.384
C11	H11	1.080	1.080
C13	H13	1.080	1.080

Bond Angles for 5X

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O20	S19	O21	120.3	123.1
O20	S19	N22	105.7	106.4
O20	S19	C24	109.6	106.4
O21	S19	N22	103.4	106.4
O21	S19	C24	110.5	106.4
N22	S19	C24	106.3	107.2
S19	N22	N1	116.1	120.0
S19	N22	H22	107.3	120.0
S19	C24	C25	120.3	120.0
S19	C24	C30	119.8	120.0
N1	N22	H22	107.3	120.0
N22	N1	C9	123.7	119.4
N22	N1	C7	124.8	119.4
C25	C24	C30	119.9	120.0
C24	C25	C26	119.7	120.0
C24	C25	H25	120.1	120.0
C24	C30	C29	120.2	120.0
C24	C30	H30	119.9	120.0
C26	C25	H25	120.1	120.0
C25	C26	C27	120.0	120.0
C25	C26	H26	120.0	120.0
C27	C26	H26	120.0	120.0
C26	C27	C29	120.3	120.0
C26	C27	H27	119.9	120.1
C29	C27	H27	119.8	120.0
C27	C29	C30	119.9	120.0
C27	C29	H29	120.1	120.0
C30	C29	H29	120.1	120.0
C29	C30	H30	119.9	120.0
C2	C1	C14	119.2	109.5
C2	C1	H11A	104.1	109.4
C2	C1	H12	106.4	109.5
C1	C2	C3	117.5	120.0
C1	C2	C4	116.7	120.1
C14	C1	H11A	104.1	109.5
C14	C1	H12	106.3	109.5
C1	C14	C7	108.7	110.7
C1	C14	S1	116.2	110.8
C1	C14	H14	103.4	110.6
H11A	C1	H12	117.4	109.5
C3	C2	C4	125.7	120.0
C2	C3	C5	131.5	120.0
C2	C3	H3	114.2	120.0
C2	C4	H41	109.4	109.5
C2	C4	H42	109.5	109.4
C2	C4	H43	109.5	109.4
C9	N1	C7	111.4	121.3
N1	C9	S1	113.1	107.7
N1	C9	S2	126.8	126.2
N1	C7	C14	117.7	113.8
N1	C7	O1	119.3	123.1
S1	C9	S2	119.9	126.2
C9	S1	C14	91.7	94.3
C7	C14	S1	102.4	103.0
C7	C14	H14	117.1	110.7
C14	C7	O1	123.0	123.1
S1	C14	H14	109.6	110.8
C5	C3	H3	114.2	120.0
C3	C5	C6	114.0	120.1
C3	C5	C8	126.3	120.1
H41	C4	H42	109.5	109.6
H41	C4	H43	109.5	109.5
H42	C4	H43	109.4	109.5
C6	C5	C8	119.7	119.7
C5	C6	C11	120.0	119.8
C5	C6	H6	120.0	120.1
C5	C8	C10	119.9	119.9
C5	C8	H8	120.1	120.1
C11	C6	H6	120.0	120.1
C6	C11	C13	120.1	120.1
C6	C11	H11	119.9	119.9
C10	C8	H8	120.1	120.1
C8	C10	C13	120.1	120.1
C8	C10	H10	119.9	120.0
C13	C10	H10	120.0	119.9
C10	C13	C11	120.3	120.3
C10	C13	H13	119.9	119.9
C13	C11	H11	120.0	120.0
C11	C13	H13	119.9	119.8

Torsion Angles for 5X

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O21	S19	O20	N22	243.8	237.1
O21	S19	O20	C24	129.6	122.9
N22	S19	O20	C24	245.8	245.9
O20	S19	N22	N1	215.6	173.6
O20	S19	N22	H22	335.5	353.6
O20	S19	C24	C25	157.5	336.4
O20	S19	C24	C30	337.5	156.1
O20	S19	O21	N22	117.5	123.0
O20	S19	O21	C24	230.8	237.1
N22	S19	O21	C24	113.3	114.1
O21	S19	N22	N1	342.8	306.5
O21	S19	N22	H22	102.8	126.5
O21	S19	C24	C25	22.8	203.5
O21	S19	C24	C30	202.8	23.3
O20	S19	N22	O21	232.8	227.1
O20	S19	N22	C24	116.4	113.6
O21	S19	N22	C24	243.7	246.5
N22	S19	C24	C25	271.3	90.0
N22	S19	C24	C30	91.4	269.7
N1	N22	S19	H22	240.0	180.0
S19	N22	N1	C9	99.4	90.0
S19	N22	N1	C7	276.0	269.8
O20	S19	C24	O21	134.7	132.9
O20	S19	C24	N22	246.2	246.4
O21	S19	C24	N22	111.4	113.6
C24	S19	N22	N1	99.1	60.0
C24	S19	N22	H22	219.1	240.0
C25	C24	S19	C30	180.0	180.3
S19	C24	C25	C26	179.9	180.0
S19	C24	C25	H25	359.9	0.0
S19	C24	C30	C29	180.1	179.7
S19	C24	C30	H30	0.1	0.0
N1	N22	S19	C24	99.1	60.0
S19	N22	N1	H22	120.0	180.0
C9	N1	N22	C7	183.4	180.2
N22	N1	C9	S1	193.4	180.0
N22	N1	C9	S2	8.9	360.0
N22	N1	C7	C14	178.9	180.0
N22	N1	C7	O1	357.0	360.0
H22	N22	S19	C24	219.1	240.0
S19	N22	H22	N1	234.6	180.0
H22	N22	N1	C9	339.5	270.0
H22	N22	N1	C7	156.0	89.8
S19	C24	C25	C30	180.0	179.7
C25	C24	C30	C29	0.1	359.5
C25	C24	C30	H30	180.1	179.7
C26	C25	C24	H25	180.0	180.0
C24	C25	C26	C27	0.2	0.1
C24	C25	C26	H26	180.2	180.0
S19	C24	C30	C25	180.0	180.3
C30	C24	C25	C26	359.9	0.2
C30	C24	C25	H25	179.8	180.3
C27	C29	C30	C24	359.9	0.5
C24	C30	C29	H29	179.9	180.3
C29	C30	C24	H30	180.0	179.7
C26	C25	C24	C30	359.9	0.2
C24	C25	C26	H25	180.0	180.0
C27	C26	C25	H26	180.0	180.1
C25	C26	C27	C29	359.8	359.9
C25	C26	C27	H27	179.8	180.0
H25	C25	C24	C30	179.8	180.3
C24	C25	H25	C26	180.0	180.0
H25	C25	C26	C27	180.2	180.0
H25	C25	C26	H26	0.2	359.9
C27	C26	C25	H25	180.2	180.0
C25	C26	C27	H26	180.0	179.9
C29	C27	C26	H27	180.0	180.0
C26	C27	C29	C30	0.2	359.8
C26	C27	C29	H29	180.1	180.0
H26	C26	C25	H25	0.2	359.9
C25	C26	H26	C27	180.0	180.1
H26	C26	C27	C29	179.8	180.0
H26	C26	C27	H27	359.8	0.0
C24	C30	C29	C27	359.9	0.5
C29	C27	C26	H26	179.8	180.0
C26	C27	C29	H27	180.0	180.0
C30	C29	C27	H29	180.0	179.8
C27	C29	C30	H30	179.9	180.2
H27	C27	C26	H26	359.8	0.0
C26	C27	H27	C29	180.0	180.0
H27	C27	C29	C30	180.2	179.8
H27	C27	C29	H29	0.1	360.0
C24	C30	C29	H30	180.0	180.3
C30	C29	C27	H27	180.2	179.8
C27	C29	C30	H29	180.0	180.2
H29	C29	C27	H27	0.1	360.0
C27	C29	H29	C30	180.0	179.8
H29	C29	C30	H30	359.9	0.0
C24	C30	H30	C29	180.0	179.7
H30	C30	C29	H29	359.9	0.0
C14	C1	C2	H11A	115.3	240.0
C14	C1	C2	H12	240.0	120.1
C2	C1	C14	C7	54.6	185.0
C2	C1	C14	S1	299.8	71.3
C2	C1	C14	H14	179.6	308.1
H11A	C1	C2	H12	124.7	240.0
C3	C2	C1	C4	177.9	180.0
C1	C2	C3	C5	182.9	187.3
C1	C2	C3	H3	2.9	7.2
C1	C2	C4	H41	250.7	92.7
C1	C2	C4	H42	130.6	212.8
C1	C2	C4	H43	10.7	332.7
C2	C1	C14	H11A	244.6	120.0
C2	C1	C14	H12	120.0	240.0
C14	C1	C2	C3	241.3	95.0
C14	C1	C2	C4	63.5	275.0
H11A	C1	C14	H12	235.3	120.0
N1	C7	C14	C1	227.1	241.6
C9	S1	C14	C1	132.9	118.4
C7	C14	C1	S1	114.8	113.6
C7	C14	C1	H14	234.9	236.9
C1	C14	C7	O1	49.0	61.6
S1	C14	C1	H14	120.2	123.2
C2	C1	H11A	C14	125.5	240.0
C2	C1	H11A	H12	242.7	120.0
H11A	C1	C2	C3	126.0	215.0
H11A	C1	C2	C4	308.1	35.0
C14	C1	H11A	H12	117.2	240.0
H11A	C1	C14	C7	169.9	65.0
H11A	C1	C14	S1	55.2	311.4
H11A	C1	C14	H14	295.0	188.1
C2	C1	H12	C14	232.0	120.0
C2	C1	H12	H11A	116.0	240.0
H12	C1	C2	C3	1.3	335.0
H12	C1	C2	C4	183.5	155.0
C14	C1	H12	H11A	244.0	120.0
H12	C1	C14	C7	294.6	305.0
H12	C1	C14	S1	179.8	191.4
H12	C1	C14	H14	59.6	68.1
C3	C2	C1	C14	241.3	95.0
C3	C2	C1	H11A	126.0	215.0
C3	C2	C1	H12	1.3	335.0
C1	C2	C3	C4	182.3	180.0
C3	C2	C4	H41	73.0	272.7
C3	C2	C4	H42	313.0	32.8
C3	C2	C4	H43	193.0	152.7
C5	C3	C2	H3	180.0	180.1
C2	C3	C5	C6	180.5	41.2
C2	C3	C5	C8	1.7	220.8
C4	C2	C1	C14	63.5	275.0
C4	C2	C1	H11A	308.1	35.0
C4	C2	C1	H12	183.5	155.0
C1	C2	C4	C3	177.7	180.0
C4	C2	C3	C5	0.6	7.3
C4	C2	C3	H3	180.6	187.2
H41	C4	C2	H42	120.0	239.9
H41	C4	C2	H43	240.0	120.0
H42	C4	C2	H43	120.0	240.0
C9	N1	N22	H22	339.5	270.0
N22	N1	C9	C7	177.0	179.8
C9	N1	C7	C14	355.9	359.8
C9	N1	C7	O1	174.0	179.7
S1	C9	N1	S2	184.5	180.0
N1	C9	S1	C14	340.7	359.9
C7	N1	N22	H22	156.0	89.8
N22	N1	C7	C9	183.1	180.2
C1	C14	C7	N1	227.1	241.6
C7	N1	C9	S1	16.4	0.2
C7	N1	C9	S2	192.0	180.2
N1	C7	C14	S1	350.6	0.1
N1	C7	C14	H14	110.5	118.6
C14	C7	N1	O1	181.9	180.0
C1	C14	S1	C9	132.9	118.4
S1	C9	N1	C7	16.4	0.2
N1	C9	S1	S2	175.9	180.0
C7	C14	S1	C9	14.6	0.0
C9	S1	C14	H14	249.6	241.6
S2	C9	N1	C7	192.0	180.2
N1	C9	S2	S1	184.7	180.0
S2	C9	S1	C14	164.8	179.9
C7	C14	C1	H11A	169.9	65.0
C7	C14	C1	H12	294.6	305.0
C1	C14	C7	S1	236.5	241.5
C1	C14	C7	H14	116.6	123.1
N1	C7	C14	O1	178.0	180.0
C9	S1	C14	C7	14.6	0.0
S1	C14	C7	H14	240.1	241.6
S1	C14	C1	H11A	55.2	311.4
S1	C14	C1	H12	179.8	191.4
C1	C14	S1	C7	118.3	118.4
C1	C14	S1	H14	243.2	236.8
C14	S1	C9	S2	164.8	179.9
C7	C14	S1	H14	125.0	118.4
S1	C14	C7	O1	172.5	180.1
H14	C14	C1	H11A	295.0	188.1
H14	C14	C1	H12	59.6	68.1
C1	C14	H14	C7	240.6	236.9
C1	C14	H14	S1	124.6	123.3
C7	C14	H14	S1	244.0	246.4
H14	C14	C7	O1	292.5	298.6
N1	C7	O1	C14	182.0	180.0
O1	C7	C14	S1	172.5	180.1
O1	C7	C14	H14	292.5	298.6
C5	C3	C2	C4	0.6	7.3
C2	C3	C5	H3	180.0	179.9
C6	C5	C3	C8	178.8	180.3
C3	C5	C6	C11	180.7	180.0
C3	C5	C6	H6	0.7	359.9
C3	C5	C8	C10	179.0	180.0
C3	C5	C8	H8	359.0	360.0
H3	C3	C2	C4	180.6	187.2
C2	C3	H3	C5	180.0	180.1
H3	C3	C5	C6	0.5	221.2
H3	C3	C5	C8	181.7	40.9
C2	C4	H41	H42	240.0	120.0
C2	C4	H41	H43	120.0	240.1
H42	C4	H41	H43	240.0	120.1
C2	C4	H42	H41	120.0	240.0
C2	C4	H42	H43	240.0	119.9
H41	C4	H42	H43	120.0	239.9
C2	C4	H43	H41	240.0	120.0
C2	C4	H43	H42	120.0	240.1
H41	C4	H43	H42	239.9	120.1
C6	C5	C3	H3	0.5	221.2
C3	C5	C6	C8	181.1	179.7
C6	C5	C8	C10	0.3	359.7
C6	C5	C8	H8	180.3	179.7
C11	C6	C5	H6	180.0	180.1
C5	C6	C11	C13	0.5	360.0
C5	C6	C11	H11	180.5	179.9
C8	C5	C3	H3	181.7	40.9
C3	C5	C8	C6	178.8	180.3
C8	C5	C6	C11	359.6	0.3
C8	C5	C6	H6	179.6	180.2
C10	C8	C5	H8	180.0	180.0
C5	C8	C10	C13	359.8	0.1
C5	C8	C10	H10	179.8	179.9
C11	C6	C5	C8	359.6	0.3
C5	C6	C11	H6	180.0	179.9
C10	C13	C11	C6	359.6	359.8
C13	C11	C6	H11	180.0	180.0
C6	C11	C13	H13	179.6	180.0
H6	C6	C5	C8	179.6	180.2
C5	C6	H6	C11	180.0	180.1
H6	C6	C11	C13	180.5	180.0
H6	C6	C11	H11	0.4	0.0
C5	C8	C10	H8	180.0	180.0
C13	C10	C8	H10	180.0	180.1
C8	C10	C13	C11	0.2	0.2
C8	C10	C13	H13	180.2	180.0
C5	C8	H8	C10	180.0	180.0
H8	C8	C10	C13	179.8	180.1
H8	C8	C10	H10	359.8	359.9
C6	C11	C13	C10	359.6	359.8
C13	C10	C8	H8	179.8	180.1
C8	C10	C13	H10	180.0	179.9
C10	C13	C11	H11	179.6	179.8
C11	C13	C10	H13	180.0	180.2
H10	C10	C8	H8	359.8	359.9
C8	C10	H10	C13	180.0	180.1
H10	C10	C13	C11	180.2	180.3
H10	C10	C13	H13	0.2	0.1
C13	C11	C6	H6	180.5	180.0
C6	C11	C13	H11	180.0	180.0
C11	C13	C10	H10	180.2	180.3
C10	C13	C11	H13	180.0	179.8
H11	C11	C6	H6	0.4	0.0
C6	C11	H11	C13	180.0	180.0
H11	C11	C13	H13	359.6	0.0
H13	C13	C10	H10	0.2	0.1
C10	C13	H13	C11	180.0	180.2
H13	C13	C11	H11	359.6	0.0