PDB Chemical Component 5UM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 5UM
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C02 |
C01 |
1.385 |
1.382 |
| C06 |
C01 |
1.389 |
1.382 |
| C01 |
S01 |
1.772 |
1.762 |
| F01 |
C03 |
1.329 |
1.351 |
| N01 |
S01 |
1.627 |
1.655 |
| N01 |
HN01 |
1.000 |
0.970 |
| N01 |
HN0A |
1.001 |
0.970 |
| S01 |
O01 |
1.438 |
1.421 |
| O02 |
S01 |
1.437 |
1.422 |
| C03 |
C02 |
1.381 |
1.382 |
| C02 |
H02 |
1.080 |
1.081 |
| C04 |
C03 |
1.381 |
1.390 |
| N07 |
C04 |
1.427 |
1.401 |
| C04 |
C05 |
1.388 |
1.388 |
| C05 |
C06 |
1.387 |
1.382 |
| C05 |
H05 |
1.080 |
1.080 |
| C06 |
H06 |
1.080 |
1.080 |
| C08 |
N07 |
1.427 |
1.348 |
| N07 |
HN07 |
1.000 |
0.969 |
| C09 |
C08 |
1.484 |
1.507 |
| C08 |
O08 |
1.218 |
1.213 |
| C09 |
C10 |
1.472 |
1.507 |
| C09 |
H09 |
1.100 |
1.090 |
| C09 |
H09A |
1.100 |
1.090 |
| C11 |
C10 |
1.383 |
1.334 |
| C10 |
S14 |
1.711 |
1.759 |
| C11 |
C12 |
1.387 |
1.384 |
| C11 |
H11 |
1.080 |
1.080 |
| C12 |
C13 |
1.384 |
1.334 |
| C12 |
H12 |
1.080 |
1.080 |
| S14 |
C13 |
1.711 |
1.759 |
| C13 |
H13 |
1.080 |
1.080 |
Bond Angles for 5UM
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C01 |
S01 |
N01 |
109.4 |
107.3 |
| C01 |
S01 |
O01 |
108.3 |
106.4 |
| F01 |
C03 |
C02 |
119.3 |
120.1 |
| S01 |
N01 |
HN01 |
109.5 |
120.0 |
| S01 |
N01 |
HN0A |
109.5 |
120.0 |
| N01 |
S01 |
O01 |
108.0 |
106.4 |
| HN01 |
N01 |
HN0A |
109.5 |
119.9 |
| C03 |
C02 |
H02 |
120.4 |
120.0 |
| C04 |
C05 |
C06 |
119.0 |
119.9 |
| C04 |
C05 |
H05 |
120.5 |
120.0 |
| C06 |
C05 |
H05 |
120.5 |
120.0 |
| C05 |
C06 |
H06 |
119.9 |
119.9 |
| C08 |
N07 |
HN07 |
117.9 |
120.1 |
| C10 |
C09 |
H09 |
108.2 |
109.5 |
| C10 |
C09 |
H09A |
108.3 |
109.5 |
| C09 |
C10 |
S14 |
125.9 |
125.2 |
| H09 |
C09 |
H09A |
110.7 |
109.5 |
| C11 |
C10 |
S14 |
106.3 |
109.6 |
| C10 |
S14 |
C13 |
97.3 |
91.0 |
| C12 |
C11 |
H11 |
122.6 |
122.6 |
| C11 |
C12 |
C13 |
115.8 |
115.0 |
| C11 |
C12 |
H12 |
122.1 |
122.5 |
| C13 |
C12 |
H12 |
122.1 |
122.5 |
| C12 |
C13 |
H13 |
127.2 |
125.2 |
| S14 |
C13 |
H13 |
127.1 |
125.2 |
Torsion Angles for 5UM
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C01 |
S01 |
N01 |
HN01 |
180.0 |
150.0 |
| C01 |
S01 |
N01 |
HN0A |
300.0 |
330.0 |
| N01 |
S01 |
C01 |
O01 |
242.5 |
246.4 |
| F01 |
C03 |
C02 |
H02 |
0.9 |
0.0 |
| C01 |
S01 |
N01 |
O01 |
117.7 |
113.6 |
| HN01 |
N01 |
S01 |
HN0A |
240.0 |
180.0 |
| S01 |
N01 |
HN01 |
HN0A |
120.0 |
180.0 |
| HN01 |
N01 |
S01 |
O01 |
62.3 |
36.4 |
| S01 |
N01 |
HN0A |
HN01 |
240.0 |
180.0 |
| HN0A |
N01 |
S01 |
O01 |
182.3 |
216.4 |
| C01 |
S01 |
O01 |
N01 |
241.6 |
245.8 |
| O01 |
S01 |
N01 |
HN01 |
62.3 |
36.4 |
| O01 |
S01 |
N01 |
HN0A |
182.3 |
216.4 |
| O02 |
S01 |
N01 |
HN01 |
302.5 |
263.6 |
| O02 |
S01 |
N01 |
HN0A |
62.5 |
83.6 |
| C04 |
C03 |
C02 |
H02 |
180.5 |
180.0 |
| N07 |
C04 |
C05 |
H05 |
359.9 |
360.0 |
| C06 |
C05 |
C04 |
H05 |
180.0 |
179.8 |
| C04 |
C05 |
C06 |
H06 |
181.1 |
180.0 |
| C04 |
C05 |
C06 |
H05 |
180.0 |
180.2 |
| C04 |
C05 |
H05 |
C06 |
180.0 |
179.8 |
| H05 |
C05 |
C06 |
H06 |
1.1 |
359.8 |
| H06 |
C06 |
C05 |
H05 |
1.1 |
359.8 |
| C09 |
C08 |
N07 |
HN07 |
0.5 |
5.5 |
| O08 |
C08 |
N07 |
HN07 |
180.1 |
185.5 |
| H09 |
C09 |
C10 |
H09A |
120.0 |
120.0 |
| C11 |
C10 |
C09 |
S14 |
178.5 |
180.2 |
| C09 |
C10 |
S14 |
C13 |
179.4 |
179.9 |
| C10 |
C09 |
H09 |
H09A |
241.5 |
240.0 |
| H09 |
C09 |
C10 |
S14 |
185.3 |
150.0 |
| C10 |
C09 |
H09A |
H09 |
118.4 |
120.0 |
| H09A |
C09 |
C10 |
S14 |
65.3 |
30.0 |
| C11 |
C10 |
C09 |
H09 |
3.8 |
330.2 |
| C11 |
C10 |
C09 |
H09A |
243.8 |
210.2 |
| C09 |
C10 |
C11 |
S14 |
181.3 |
179.8 |
| C11 |
C10 |
S14 |
C13 |
0.6 |
359.7 |
| S14 |
C10 |
C09 |
H09 |
185.3 |
150.0 |
| S14 |
C10 |
C09 |
H09A |
65.3 |
30.0 |
| C10 |
S14 |
C13 |
H13 |
179.4 |
180.1 |
| C12 |
C11 |
C10 |
S14 |
359.5 |
0.2 |
| C13 |
C12 |
C11 |
H12 |
180.0 |
180.0 |
| C11 |
C12 |
C13 |
H13 |
180.4 |
179.9 |
| H11 |
C11 |
C10 |
S14 |
179.5 |
180.3 |
| H11 |
C11 |
C12 |
C13 |
180.1 |
179.9 |
| H11 |
C11 |
C12 |
H12 |
0.2 |
360.0 |
| C10 |
S14 |
C13 |
C12 |
359.5 |
0.3 |
| C13 |
C12 |
C11 |
H11 |
180.1 |
179.9 |
| C11 |
C12 |
C13 |
H12 |
180.0 |
180.0 |
| S14 |
C13 |
C12 |
H13 |
180.0 |
179.8 |
| H12 |
C12 |
C11 |
H11 |
0.2 |
360.0 |
| C11 |
C12 |
H12 |
C13 |
180.0 |
180.0 |
| H12 |
C12 |
C13 |
H13 |
0.3 |
359.9 |
| S14 |
C13 |
C12 |
H12 |
180.3 |
179.7 |
| C12 |
C13 |
S14 |
H13 |
180.0 |
180.2 |
| H13 |
C13 |
C12 |
H12 |
0.3 |
359.9 |