PDB Chemical Component 5R8

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5R8

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N36 C35 1.469 1.469
C35 C28 1.513 1.507
C28 C27 1.434 1.383
C28 C29 1.424 1.383
C27 C26 1.415 1.382
C29 C30 1.412 1.382
C26 C23 1.428 1.382
C30 C23 1.437 1.382
C23 C22 1.533 1.507
C7 C6 1.556 1.460
C7 N8 1.505 1.481
C6 N2 1.485 1.481
C1 N2 1.472 1.469
C22 N8 1.500 1.469
N8 C9 1.481 1.441
N2 C11 1.498 1.441
C9 C10 1.526 1.544
C11 C10 1.539 1.543
C6 H1 1.100 1.090
C6 H2 1.100 1.090
C1 H3 1.100 1.090
C1 H4 1.099 1.090
C1 H5 1.100 1.090
C7 H7 1.100 1.090
C7 H8 1.100 1.090
C9 H10 1.100 1.090
C9 H11 1.100 1.091
C10 H12 1.100 1.090
C10 H13 1.100 1.090
C11 H14 1.100 1.090
C11 H15 1.100 1.090
C22 H16 1.100 1.090
C22 H17 1.100 1.090
C26 H18 1.080 1.080
C27 H19 1.080 1.080
C29 H20 1.080 1.080
C30 H21 1.080 1.080
C35 H22 1.100 1.090
C35 H23 1.100 1.090
N36 H24 1.001 1.009
N36 H25 1.000 1.009

Bond Angles for 5R8

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N36 C35 H22 108.7 109.5
N36 C35 H23 108.7 109.5
C28 C27 H19 119.9 120.0
C28 C29 C30 120.4 120.0
C28 C29 H20 119.8 120.0
C27 C26 H18 119.7 120.0
C30 C29 H20 119.8 120.0
C29 C30 H21 119.7 120.0
C23 C22 H16 107.0 109.5
C23 C22 H17 107.0 109.5
C7 C6 H1 108.1 108.9
C7 C6 H2 108.1 108.9
C7 N8 C9 116.2 109.9
N8 C7 H7 107.4 109.0
N8 C7 H8 107.4 108.9
C6 N2 C1 116.6 111.0
C6 N2 C11 116.7 109.9
N2 C6 H1 108.1 108.9
N2 C6 H2 108.1 109.0
C1 N2 C11 117.8 111.0
N2 C1 H3 109.5 109.5
N2 C1 H4 109.5 109.5
N2 C1 H5 109.5 109.5
N8 C9 C10 111.4 112.6
N8 C9 H10 109.0 108.9
N8 C9 H11 109.0 108.9
N2 C11 C10 116.8 112.6
N2 C11 H14 107.6 108.9
N2 C11 H15 107.6 108.9
C10 C9 H10 109.0 108.8
C10 C9 H11 109.0 108.8
C9 C10 H12 108.7 109.0
C9 C10 H13 108.7 109.0
C11 C10 H12 108.7 109.1
C11 C10 H13 108.7 109.0
H1 C6 H2 109.4 108.9
H3 C1 H4 109.5 109.5
H3 C1 H5 109.5 109.5
H4 C1 H5 109.4 109.4
H7 C7 H8 109.5 108.8
H10 C9 H11 109.5 108.7
H12 C10 H13 109.5 109.0
H14 C11 H15 109.5 108.7
H16 C22 H17 109.5 109.5
H22 C35 H23 109.5 109.5
H24 N36 H25 109.5 111.0

Torsion Angles for 5R8

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H22 C35 N36 H23 240.9 120.0
C35 C28 C27 H19 0.0 0.0
C35 C28 C29 H20 359.9 359.9
C28 C27 C26 H18 180.4 180.0
C29 C28 C27 H19 179.8 180.0
C30 C29 C28 H20 180.0 179.8
C28 C29 C30 H21 179.7 180.0
C28 C29 C30 H20 180.0 180.2
C26 C23 C22 H16 22.4 330.0
C26 C23 C22 H17 139.7 210.0
C30 C23 C22 H16 202.8 149.8
C30 C23 C22 H17 320.1 29.8
H16 C22 C23 H17 242.7 120.0
C7 C6 N2 C11 81.7 279.7
N2 C6 C7 H1 239.2 120.7
N2 C6 C7 H2 120.8 239.3
H1 C6 C7 H2 241.6 118.7
N8 C7 C6 H1 69.5 300.0
N8 C7 C6 H2 187.9 181.3
C7 N8 C9 C10 84.3 94.3
C7 N8 C9 H10 204.6 215.1
C7 N8 C9 H11 324.0 333.5
H7 C7 N8 H8 117.7 118.6
C7 C6 N2 H1 120.8 239.3
C7 C6 N2 H2 239.2 120.6
C1 N2 C6 C11 213.4 236.9
C6 N2 C1 H3 180.0 60.0
C6 N2 C1 H4 300.0 180.0
C6 N2 C1 H5 60.0 300.0
C6 N2 C11 C10 297.0 94.4
C6 N2 C11 H14 58.1 215.2
C6 N2 C11 H15 176.0 333.5
H1 C6 N2 H2 118.4 241.3
C6 N2 C1 C11 146.2 122.5
C1 N2 C6 H1 174.4 277.2
C1 N2 C6 H2 55.9 35.9
C1 N2 C11 C10 83.2 217.5
C1 N2 C11 H14 204.3 338.3
C1 N2 C11 H15 322.2 96.7
H3 C1 N2 H4 240.0 240.0
H3 C1 N2 H5 120.0 120.0
H4 C1 N2 H5 240.0 240.1
C22 N8 C7 H7 73.7 35.7
C22 N8 C7 H8 316.0 277.1
C22 N8 C9 H10 348.8 338.3
C22 N8 C9 H11 108.2 96.7
C9 N8 C7 H7 216.3 158.9
C9 N8 C7 H8 98.6 40.4
C10 C9 N8 H10 239.7 239.2
C10 C9 N8 H11 120.3 120.8
N8 C9 C10 H12 38.3 79.5
N8 C9 C10 H13 157.3 198.4
H10 C9 N8 H11 240.6 241.6
C6 N2 C11 C1 213.8 236.9
C11 N2 C6 H1 321.0 40.3
C11 N2 C6 H2 202.5 159.0
C11 N2 C1 H3 33.8 297.5
C11 N2 C1 H4 153.8 57.5
C11 N2 C1 H5 273.7 177.4
N2 C11 C10 H12 295.4 198.3
N2 C11 C10 H13 176.3 79.4
H14 C11 N2 H15 242.1 241.6
N8 C9 C10 H10 120.3 120.8
N8 C9 C10 H11 239.7 239.2
N2 C11 C10 C9 55.9 318.9
C11 C10 C9 H12 239.5 239.4
C11 C10 C9 H13 120.5 120.5
H10 C9 C10 H11 119.4 118.4
H12 C10 C9 H13 241.0 241.1
N2 C11 C10 H14 121.1 120.8
N2 C11 C10 H15 238.9 239.1
C11 C10 C9 H10 157.5 198.1
C11 C10 C9 H11 38.1 79.7
C9 C10 C11 H12 120.4 120.5
C9 C10 C11 H13 239.5 239.5
H12 C10 C11 H13 119.1 118.9
C7 C6 H1 H2 117.6 241.3
H1 C6 N2 C1 174.4 277.2
H1 C6 N2 C11 321.0 40.3
N2 C6 H1 H2 242.4 118.7
C7 C6 H2 H1 242.5 118.7
H2 C6 N2 C1 55.9 35.9
H2 C6 N2 C11 202.5 159.0
N2 C6 H2 H1 117.6 241.3
H3 C1 N2 C11 33.8 297.5
N2 C1 H3 H4 120.0 120.1
N2 C1 H3 H5 240.0 240.0
H4 C1 H3 H5 120.0 119.9
H4 C1 N2 C11 153.8 57.5
N2 C1 H4 H3 239.9 239.9
N2 C1 H4 H5 120.0 120.0
H3 C1 H4 H5 240.0 240.0
H5 C1 N2 C11 273.7 177.4
N2 C1 H5 H3 120.1 120.1
N2 C1 H5 H4 240.0 240.0
H3 C1 H5 H4 120.0 120.0
H7 C7 C6 H1 190.7 60.7
H7 C7 C6 H2 309.1 302.0
H7 C7 N8 C9 216.3 158.9
N8 C7 H7 H8 243.7 241.4
H8 C7 C6 H1 308.4 179.3
H8 C7 C6 H2 66.7 60.6
H8 C7 N8 C9 98.6 40.4
N8 C7 H8 H7 116.3 118.7
N8 C9 H10 C10 238.2 236.9
N8 C9 H10 H11 119.1 118.5
C10 C9 H10 H11 240.9 241.6
H10 C9 C10 H12 278.0 318.7
H10 C9 C10 H13 37.0 77.6
N8 C9 H11 C10 121.8 123.1
N8 C9 H11 H10 240.9 241.5
C10 C9 H11 H10 119.1 118.4
H11 C9 C10 H12 158.6 200.3
H11 C9 C10 H13 277.6 319.2
H12 C10 C9 H10 278.0 318.7
H12 C10 C9 H11 158.6 200.3
C9 C10 H12 H13 118.5 118.9
C11 C10 H12 H13 241.4 241.1
H13 C10 C9 H10 37.0 77.6
H13 C10 C9 H11 277.6 319.2
C9 C10 H13 H12 241.5 241.1
C11 C10 H13 H12 118.6 119.0
N2 C11 H14 C10 233.3 236.9
N2 C11 H14 H15 116.6 118.5
H14 C11 C10 H12 174.4 77.5
H14 C11 C10 H13 55.3 318.6
N2 C11 H15 C10 126.7 123.1
N2 C11 H15 H14 243.4 241.5
H15 C11 C10 H12 56.5 319.2
H15 C11 C10 H13 297.4 200.3
C23 C22 H16 H17 115.7 240.0
C23 C22 H17 H16 244.3 120.0
H19 C27 C26 H18 0.4 359.9
C28 C29 H20 C30 180.0 179.8
H20 C29 C30 H21 359.7 359.8
H21 C30 C29 H20 359.7 359.8
N36 C35 H22 H23 118.6 240.0
N36 C35 H23 H22 241.4 120.0
H24 N36 C35 H22 300.5 60.0
H24 N36 C35 H23 59.6 300.0
H25 N36 C35 H22 60.5 183.9
H25 N36 C35 H23 179.6 64.0