PDB Chemical Component 5P3

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5P3

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C1 1.398 1.396
C1 C6 1.400 1.402
C1 C7 1.538 1.474
C3 C2 1.387 1.390
C2 H2 1.080 1.080
C12 C3 1.425 1.484
C3 C4 1.408 1.396
C4 C5 1.389 1.380
C4 H4 1.080 1.079
C5 C6 1.381 1.389
C5 CL11 1.729 1.735
C6 O10 1.374 1.356
O8 C7 1.275 1.214
C7 O9 1.255 1.348
O9 HO9 0.950 0.966
O10 HO10 0.950 0.967
C13 C12 1.429 1.394
C17 C12 1.381 1.393
C14 C13 1.385 1.381
C13 H13 1.080 1.081
C15 C14 1.380 1.383
C14 H14 1.080 1.079
C15 C16 1.391 1.383
C15 H15 1.080 1.081
C16 C17 1.389 1.381
C16 H16 1.080 1.080
C17 H17 1.080 1.079

Bond Angles for 5P3

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 120.4 119.8
C2 C1 C7 121.4 120.1
C6 C1 C7 118.2 120.1
C1 C6 C5 118.3 119.9
C1 C6 O10 120.7 120.1
C1 C7 O9 115.0 120.0
C3 C2 H2 119.1 120.1
C3 C4 C5 121.5 120.3
C3 C4 H4 119.2 119.9
C5 C4 H4 119.3 119.8
C4 C5 C6 121.1 120.2
C4 C5 CL11 119.4 119.9
C6 C5 CL11 119.5 119.9
C5 C6 O10 121.0 120.0
C6 O10 HO10 109.5 114.0
O8 C7 O9 125.1 120.0
C7 O9 HO9 109.5 117.1
C14 C13 H13 120.6 120.1
C15 C14 H14 119.2 120.0
C16 C15 H15 119.8 119.9
C15 C16 C17 118.4 120.1
C15 C16 H16 120.8 119.9
C17 C16 H16 120.8 119.9
C16 C17 H17 118.7 120.1

Torsion Angles for 5P3

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 C7 175.9 180.3
C2 C1 C6 C5 1.4 359.9
C2 C1 C6 O10 182.5 179.7
C2 C1 C7 O9 170.6 0.3
C2 C1 C6 C7 183.9 179.7
C6 C1 C7 O9 354.6 180.0
C4 C5 C6 C1 0.5 0.1
C1 C6 C5 CL11 179.2 180.0
C5 C6 C1 O10 178.9 180.2
C1 C6 O10 HO10 180.0 90.0
C2 C1 C7 C6 176.0 180.3
C7 C1 C6 C5 177.4 180.2
C7 C1 C6 O10 358.6 0.0
O8 C7 C1 O9 184.3 180.1
C1 C7 O9 HO9 184.6 180.0
C3 C2 C1 C6 357.8 0.0
C3 C2 C1 C7 181.9 179.7
H2 C2 C1 C6 177.8 180.0
H2 C2 C1 C7 1.9 359.6
C12 C3 C2 H2 6.6 0.0
C12 C3 C4 H4 355.7 0.1
C4 C3 C2 H2 181.0 180.1
C5 C4 C3 H4 180.0 180.0
C3 C4 C5 C6 358.4 360.0
C3 C4 C5 CL11 179.6 180.0
C1 C6 C5 C4 0.5 0.1
C3 C4 C5 H4 180.0 180.0
C6 C5 C4 CL11 178.8 179.9
C4 C5 C6 O10 179.3 180.3
C3 C4 H4 C5 180.0 180.0
H4 C4 C5 C6 178.4 179.9
H4 C4 C5 CL11 359.6 0.0
C5 C6 C1 C7 177.4 180.2
C1 C6 C5 O10 181.1 179.8
C6 C5 C4 H4 178.4 179.9
C4 C5 C6 CL11 181.2 180.1
C5 C6 O10 HO10 1.2 269.8
CL11 C5 C4 H4 359.6 0.0
C4 C5 CL11 C6 178.8 179.9
CL11 C5 C6 O10 358.1 0.2
O10 C6 C1 C7 358.6 0.0
C1 C6 O10 C5 178.8 180.2
O10 C6 C5 CL11 358.1 0.2
C1 C7 O8 O9 175.3 179.9
O8 C7 O9 HO9 0.0 359.9
C15 C14 C13 H13 181.7 180.1
H14 C14 C13 H13 1.8 0.0
C16 C15 C14 H14 182.5 180.0
C17 C16 C15 H16 180.0 179.6
C15 C16 C17 H17 184.8 180.0
H15 C15 C14 H14 2.5 0.0
H15 C15 C16 C17 174.3 179.7
H15 C15 C16 H16 354.3 0.1
C17 C16 C15 H15 174.3 179.7
C15 C16 C17 H16 180.0 180.4
H16 C16 C15 H15 354.3 0.1
C15 C16 H16 C17 180.0 179.6
H16 C16 C17 H17 4.8 359.6
H17 C17 C16 H16 4.8 359.6