PDB Chemical Component 5P1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 5P1
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O12 |
C11 |
1.375 |
1.361 |
| C10 |
C11 |
1.399 |
1.408 |
| C10 |
C09 |
1.394 |
1.360 |
| C11 |
C13 |
1.395 |
1.354 |
| C09 |
C08 |
1.425 |
1.409 |
| C13 |
N14 |
1.389 |
1.367 |
| C08 |
N14 |
1.329 |
1.370 |
| C08 |
N07 |
1.382 |
1.326 |
| N14 |
C15 |
1.403 |
1.367 |
| F19 |
C16 |
1.331 |
1.399 |
| N07 |
C06 |
1.350 |
1.342 |
| C15 |
C16 |
1.505 |
1.508 |
| C15 |
C06 |
1.410 |
1.363 |
| C16 |
F17 |
1.328 |
1.399 |
| C16 |
F18 |
1.330 |
1.399 |
| C06 |
C05 |
1.398 |
1.483 |
| C20 |
C05 |
1.391 |
1.393 |
| C20 |
C21 |
1.395 |
1.379 |
| C05 |
C04 |
1.393 |
1.394 |
| C21 |
C02 |
1.393 |
1.388 |
| C04 |
C03 |
1.393 |
1.379 |
| C02 |
C03 |
1.391 |
1.388 |
| C02 |
O01 |
1.378 |
1.359 |
| O01 |
H1 |
0.950 |
0.967 |
| C03 |
H2 |
1.080 |
1.080 |
| C04 |
H3 |
1.080 |
1.081 |
| C09 |
H4 |
1.080 |
1.081 |
| C10 |
H5 |
1.080 |
1.080 |
| O12 |
H6 |
0.950 |
0.967 |
| C13 |
H7 |
1.080 |
1.079 |
| C20 |
H8 |
1.080 |
1.080 |
| C21 |
H9 |
1.080 |
1.080 |
Bond Angles for 5P1
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O12 |
C11 |
C13 |
120.3 |
119.9 |
| C10 |
C11 |
C13 |
120.2 |
120.2 |
| C11 |
C10 |
H5 |
120.7 |
120.2 |
| C10 |
C09 |
H4 |
120.5 |
120.3 |
| C11 |
C13 |
N14 |
120.6 |
120.5 |
| C11 |
C13 |
H7 |
119.7 |
119.7 |
| C09 |
C08 |
N14 |
122.1 |
119.7 |
| C08 |
N14 |
C13 |
119.5 |
120.5 |
| C13 |
N14 |
C15 |
132.6 |
132.3 |
| N14 |
C13 |
H7 |
119.7 |
119.7 |
| C08 |
N14 |
C15 |
107.9 |
107.2 |
| N14 |
C15 |
C16 |
125.4 |
126.5 |
| C15 |
C16 |
F17 |
109.4 |
109.5 |
| C15 |
C16 |
F18 |
111.2 |
109.5 |
| F17 |
C16 |
F18 |
108.3 |
109.4 |
| C21 |
C20 |
H8 |
119.9 |
120.1 |
| C20 |
C21 |
H9 |
119.8 |
120.0 |
| C05 |
C04 |
H3 |
119.7 |
120.0 |
| C04 |
C03 |
H2 |
119.9 |
120.0 |
| C02 |
C03 |
H2 |
120.0 |
120.0 |
| C02 |
O01 |
H1 |
109.5 |
114.0 |
Torsion Angles for 5P1
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C10 |
C11 |
O12 |
C13 |
180.4 |
180.0 |
| O12 |
C11 |
C10 |
H5 |
360.0 |
0.0 |
| O12 |
C11 |
C13 |
N14 |
180.0 |
180.0 |
| O12 |
C11 |
C13 |
H7 |
0.1 |
360.0 |
| O12 |
C11 |
C10 |
C13 |
179.6 |
180.0 |
| C11 |
C10 |
C09 |
H4 |
179.9 |
180.0 |
| C10 |
C11 |
C13 |
N14 |
359.6 |
0.0 |
| C10 |
C11 |
C13 |
H7 |
179.6 |
180.0 |
| C10 |
C09 |
C08 |
N14 |
359.9 |
0.0 |
| C13 |
C11 |
C10 |
H5 |
180.4 |
180.0 |
| C08 |
N14 |
C13 |
C11 |
0.2 |
360.0 |
| C11 |
C13 |
N14 |
C15 |
180.1 |
180.0 |
| N14 |
C13 |
C11 |
H7 |
180.0 |
180.0 |
| C09 |
C08 |
N14 |
C13 |
0.1 |
360.0 |
| C09 |
C08 |
N14 |
C15 |
180.1 |
180.0 |
| C11 |
C13 |
N14 |
H7 |
180.0 |
180.0 |
| C08 |
N14 |
C13 |
C15 |
180.1 |
180.0 |
| C13 |
N14 |
C15 |
C16 |
359.9 |
0.0 |
| C11 |
C13 |
N14 |
C08 |
0.2 |
360.0 |
| C13 |
N14 |
C08 |
C15 |
179.9 |
180.0 |
| C08 |
N14 |
C13 |
H7 |
180.1 |
180.0 |
| C08 |
N14 |
C15 |
C16 |
179.9 |
180.0 |
| C08 |
N14 |
C15 |
C13 |
179.9 |
180.0 |
| C15 |
N14 |
C13 |
H7 |
0.1 |
0.1 |
| N14 |
C15 |
C16 |
F17 |
84.6 |
95.8 |
| N14 |
C15 |
C16 |
F18 |
204.1 |
215.8 |
| F17 |
C16 |
C15 |
F18 |
240.4 |
240.1 |
| C15 |
C16 |
F17 |
F18 |
121.3 |
120.0 |
| C15 |
C16 |
F18 |
F17 |
239.8 |
240.0 |
| C06 |
C05 |
C04 |
H3 |
359.5 |
0.1 |
| C20 |
C05 |
C04 |
H3 |
180.8 |
180.1 |
| C05 |
C04 |
C03 |
H2 |
179.3 |
180.0 |
| C21 |
C02 |
C03 |
H2 |
180.2 |
180.3 |
| C21 |
C02 |
O01 |
H1 |
180.0 |
269.7 |
| C02 |
C03 |
C04 |
H2 |
180.0 |
180.0 |
| C04 |
C03 |
C02 |
H2 |
180.0 |
180.0 |
| C03 |
C02 |
O01 |
H1 |
0.2 |
90.0 |
| H3 |
C04 |
C03 |
H2 |
359.3 |
359.9 |
| H4 |
C09 |
C08 |
N14 |
179.9 |
180.0 |
| H5 |
C10 |
C11 |
C13 |
180.4 |
180.0 |
| H5 |
C10 |
C09 |
H4 |
359.9 |
0.0 |
| H6 |
O12 |
C11 |
C13 |
359.6 |
180.0 |
| C11 |
C13 |
H7 |
N14 |
180.0 |
180.0 |
| H7 |
C13 |
N14 |
C15 |
0.1 |
0.1 |
| H8 |
C20 |
C21 |
H9 |
0.0 |
359.8 |
| H9 |
C21 |
C20 |
H8 |
0.0 |
359.8 |