PDB Chemical Component 5OT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 5OT
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| SAJ |
CAH |
1.816 |
1.713 |
| NAI |
CAH |
1.456 |
1.348 |
| NAI |
CAK |
1.454 |
1.399 |
| IAQ |
CAO |
2.112 |
2.095 |
| CAP |
CAK |
1.381 |
1.389 |
| CAP |
CAO |
1.389 |
1.382 |
| CAH |
NAG |
1.444 |
1.347 |
| CAK |
CAL |
1.387 |
1.388 |
| CAO |
CAN |
1.386 |
1.383 |
| NAG |
CAD |
1.438 |
1.399 |
| CAD |
CAE |
1.371 |
1.389 |
| CAD |
CAC |
1.383 |
1.388 |
| CAL |
CAM |
1.387 |
1.381 |
| CAE |
CAF |
1.369 |
1.382 |
| CAN |
CAM |
1.378 |
1.382 |
| CAC |
CAB |
1.385 |
1.382 |
| CAF |
CAA |
1.370 |
1.383 |
| CAB |
CAA |
1.387 |
1.383 |
| CAA |
SAR |
1.807 |
1.762 |
| NAU |
SAR |
1.707 |
1.656 |
| OAT |
SAR |
1.622 |
1.421 |
| SAR |
OAS |
1.625 |
1.421 |
| CAP |
H1 |
1.080 |
1.080 |
| CAN |
H2 |
1.080 |
1.080 |
| CAM |
H3 |
1.080 |
1.080 |
| CAL |
H4 |
1.080 |
1.081 |
| NAI |
H5 |
1.000 |
0.970 |
| NAG |
H8 |
1.000 |
0.970 |
| CAC |
H9 |
1.080 |
1.080 |
| CAB |
H10 |
1.080 |
1.080 |
| NAU |
H11 |
1.000 |
0.970 |
| NAU |
H12 |
1.000 |
0.970 |
| CAF |
H13 |
1.080 |
1.079 |
| CAE |
H14 |
1.080 |
1.081 |
Bond Angles for 5OT
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| SAJ |
CAH |
NAG |
112.2 |
120.0 |
| NAI |
CAH |
NAG |
103.7 |
120.0 |
| CAH |
NAI |
H5 |
122.2 |
119.9 |
| IAQ |
CAO |
CAN |
118.9 |
120.0 |
| CAO |
CAP |
CAK |
119.4 |
119.9 |
| CAP |
CAK |
CAL |
118.9 |
119.9 |
| CAK |
CAP |
H1 |
120.3 |
120.0 |
| CAP |
CAO |
CAN |
121.4 |
120.1 |
| CAO |
CAP |
H1 |
120.3 |
120.1 |
| CAH |
NAG |
CAD |
125.9 |
120.0 |
| CAH |
NAG |
H8 |
117.1 |
120.0 |
| CAK |
CAL |
H4 |
119.2 |
120.0 |
| CAO |
CAN |
CAM |
119.2 |
120.1 |
| CAO |
CAN |
H2 |
120.4 |
119.9 |
| NAG |
CAD |
CAE |
114.4 |
120.1 |
| NAG |
CAD |
CAC |
124.1 |
120.1 |
| CAD |
NAG |
H8 |
117.1 |
120.0 |
| CAC |
CAD |
CAE |
121.4 |
119.8 |
| CAD |
CAE |
CAF |
120.2 |
120.0 |
| CAD |
CAE |
H14 |
119.9 |
120.0 |
| CAD |
CAC |
CAB |
118.6 |
119.9 |
| CAD |
CAC |
H9 |
120.7 |
120.1 |
| CAL |
CAM |
H3 |
120.3 |
119.9 |
| CAE |
CAF |
H13 |
120.4 |
120.0 |
| CAM |
CAN |
H2 |
120.4 |
120.0 |
| CAN |
CAM |
H3 |
120.3 |
120.0 |
| CAC |
CAB |
CAA |
119.2 |
120.0 |
| CAB |
CAC |
H9 |
120.7 |
120.0 |
| CAC |
CAB |
H10 |
120.4 |
120.0 |
| CAB |
CAA |
SAR |
121.6 |
119.9 |
| CAA |
CAB |
H10 |
120.4 |
120.0 |
| CAA |
SAR |
OAS |
107.1 |
106.4 |
| H11 |
NAU |
H12 |
109.5 |
120.1 |
Torsion Angles for 5OT
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NAI |
CAH |
SAJ |
NAG |
117.3 |
180.0 |
| SAJ |
CAH |
NAI |
H5 |
344.3 |
185.8 |
| SAJ |
CAH |
NAG |
CAD |
306.9 |
5.7 |
| SAJ |
CAH |
NAG |
H8 |
126.9 |
185.7 |
| SAJ |
CAH |
NAI |
NAG |
237.9 |
180.0 |
| NAI |
CAH |
NAG |
CAD |
183.8 |
185.7 |
| NAI |
CAH |
NAG |
H8 |
3.8 |
5.8 |
| NAI |
CAK |
CAP |
H1 |
359.6 |
0.3 |
| NAI |
CAK |
CAL |
H4 |
1.0 |
360.0 |
| IAQ |
CAO |
CAP |
CAK |
179.9 |
180.0 |
| CAP |
CAO |
IAQ |
CAN |
179.6 |
180.0 |
| IAQ |
CAO |
CAP |
H1 |
359.9 |
359.8 |
| IAQ |
CAO |
CAN |
CAM |
180.1 |
180.0 |
| IAQ |
CAO |
CAN |
H2 |
0.1 |
359.9 |
| CAK |
CAP |
CAO |
CAN |
359.5 |
360.0 |
| CAO |
CAP |
CAK |
H1 |
180.0 |
179.8 |
| CAP |
CAK |
CAL |
H4 |
180.7 |
180.1 |
| IAQ |
CAO |
CAP |
CAN |
180.4 |
180.0 |
| CAO |
CAP |
CAK |
CAL |
359.9 |
360.0 |
| CAK |
CAP |
CAO |
H1 |
180.0 |
180.2 |
| CAP |
CAO |
CAN |
CAM |
0.5 |
0.1 |
| CAP |
CAO |
CAN |
H2 |
180.5 |
180.0 |
| NAG |
CAH |
NAI |
H5 |
106.5 |
5.7 |
| CAH |
NAG |
CAD |
CAE |
174.9 |
220.9 |
| CAH |
NAG |
CAD |
CAC |
354.5 |
41.2 |
| CAD |
NAG |
CAH |
H8 |
180.0 |
179.9 |
| CAL |
CAK |
CAP |
H1 |
179.9 |
180.2 |
| CAK |
CAL |
CAM |
H3 |
179.3 |
179.9 |
| CAN |
CAO |
CAP |
CAK |
359.5 |
360.0 |
| CAN |
CAO |
CAP |
H1 |
179.5 |
179.7 |
| CAM |
CAN |
CAO |
H2 |
180.0 |
180.1 |
| CAO |
CAN |
CAM |
H3 |
180.1 |
180.0 |
| CAH |
NAG |
CAD |
H8 |
180.0 |
180.1 |
| CAC |
CAD |
NAG |
CAE |
179.6 |
180.3 |
| NAG |
CAD |
CAE |
CAF |
179.2 |
179.7 |
| NAG |
CAD |
CAE |
H14 |
359.1 |
0.0 |
| NAG |
CAD |
CAC |
CAB |
180.3 |
180.0 |
| NAG |
CAD |
CAC |
H9 |
0.4 |
359.9 |
| NAG |
CAD |
CAE |
CAC |
179.6 |
180.3 |
| CAE |
CAD |
NAG |
H8 |
354.9 |
40.8 |
| CAE |
CAD |
CAC |
CAB |
359.9 |
0.3 |
| CAE |
CAD |
CAC |
H9 |
179.9 |
180.3 |
| CAD |
CAE |
CAF |
H13 |
180.6 |
180.3 |
| NAG |
CAD |
CAC |
CAE |
180.5 |
179.7 |
| CAC |
CAD |
NAG |
H8 |
174.4 |
221.2 |
| CAC |
CAD |
CAE |
CAF |
359.6 |
359.4 |
| CAC |
CAD |
CAE |
H14 |
179.6 |
179.7 |
| CAD |
CAC |
CAB |
CAA |
0.5 |
0.0 |
| CAB |
CAC |
CAD |
H9 |
180.0 |
180.1 |
| CAD |
CAC |
CAB |
H10 |
180.5 |
180.0 |
| CAP |
CAK |
CAL |
CAM |
0.7 |
0.1 |
| CAL |
CAM |
CAN |
H2 |
180.1 |
180.0 |
| CAN |
CAM |
CAL |
H3 |
180.0 |
180.1 |
| CAD |
CAE |
CAF |
H14 |
180.0 |
180.3 |
| CAO |
CAN |
CAM |
H2 |
180.0 |
179.9 |
| CAL |
CAM |
CAN |
H3 |
180.0 |
179.9 |
| CAB |
CAC |
CAD |
CAE |
359.9 |
0.3 |
| CAD |
CAC |
CAB |
H9 |
180.0 |
179.9 |
| CAC |
CAB |
CAA |
SAR |
180.5 |
180.0 |
| CAA |
CAB |
CAC |
H10 |
180.0 |
180.1 |
| CAD |
CAE |
CAF |
CAA |
0.6 |
0.6 |
| CAF |
CAA |
CAB |
H10 |
179.7 |
180.0 |
| CAA |
CAB |
CAC |
H9 |
180.5 |
180.1 |
| CAC |
CAB |
CAA |
H10 |
180.0 |
179.9 |
| CAB |
CAA |
SAR |
OAS |
255.0 |
203.5 |
| SAR |
CAA |
CAB |
H10 |
0.5 |
0.1 |
| CAO |
CAP |
H1 |
CAK |
180.0 |
180.2 |
| H1 |
CAP |
CAK |
CAL |
179.9 |
180.2 |
| H1 |
CAP |
CAO |
CAN |
179.5 |
179.7 |
| CAO |
CAN |
H2 |
CAM |
180.0 |
180.1 |
| H2 |
CAN |
CAM |
H3 |
0.1 |
0.1 |
| H3 |
CAM |
CAN |
H2 |
0.1 |
0.1 |
| H4 |
CAL |
CAM |
H3 |
359.3 |
359.9 |
| H5 |
NAI |
CAH |
NAG |
106.5 |
5.7 |
| CAH |
NAG |
H8 |
CAD |
180.0 |
179.9 |
| H8 |
NAG |
CAD |
CAE |
354.9 |
40.8 |
| H8 |
NAG |
CAD |
CAC |
174.4 |
221.2 |
| H9 |
CAC |
CAD |
CAE |
179.9 |
180.3 |
| CAD |
CAC |
H9 |
CAB |
180.0 |
180.1 |
| H9 |
CAC |
CAB |
CAA |
180.5 |
180.1 |
| H9 |
CAC |
CAB |
H10 |
0.5 |
0.0 |
| CAC |
CAB |
H10 |
CAA |
180.0 |
180.1 |
| H10 |
CAB |
CAC |
H9 |
0.5 |
0.0 |
| H10 |
CAB |
CAA |
SAR |
0.5 |
0.1 |
| CAD |
CAE |
H14 |
CAF |
180.0 |
179.7 |
| H14 |
CAE |
CAF |
H13 |
0.6 |
0.0 |