PDB Chemical Component 5OH

Ideal Model

Chemical Description

Name (2S)-amino[(4R,6S)-2-amino-6-hydroxy-3,4,5,6-tetrahydropyrimidin-4-yl]ethanoic acid
Formula C6 H12 N4 O3
Formal charge 0
Molecular weight 188.184 g/mol
Component type L-peptide linking
Nonstandard Parent Id ALA

Chemical features

Atom count 25
Chiral atom count 3
Chiral atoms CA CB CS
Observed leaving atoms OXT HNA HXT
Bond count 25
Aromatic bond count 0

Chemical Identifiers

Systematic name (OpenEye OEToolkits) (2S)-2-azanyl-2-[(4S,6R)-2-azanyl-4-hydroxy-1,4,5,6-tetrahydropyrimidin-6-yl]ethanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) N[C@@H]([C@H]1C[C@H](O)N=C(N)N1)C(O)=O
SMILES (CACTVS) N[CH]([CH]1C[CH](O)N=C(N)N1)C(O)=O
Stereo SMILES (OpenEye) C1[C@@H](NC(=N[C@H]1O)N)[C@@H](C(=O)O)N
InChI descriptor InChI=1S/C6H12N4O3/c7-4(5(12)13)2-1-3(11)10-6(8)9-2/h2-4,11H,1,7H2,(H,12,13)(H3,8,9,10)/t2-,3+,4+/m1/s1
InChIKey descriptor JHJFDHNZNBHFJZ-UZBSEBFBSA-N

Status Information

Last modified 2011-06-04
Created 2010-02-05
Release status REL
Model PDB code 3KNH
Processing site RCSB