PDB Chemical Component 5NS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 5NS
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C6 |
C1 |
1.403 |
1.361 |
| C1 |
C2 |
1.394 |
1.393 |
| C1 |
H1 |
1.080 |
1.080 |
| C2 |
C3 |
1.392 |
1.361 |
| C2 |
H2 |
1.080 |
1.081 |
| C4 |
C3 |
1.400 |
1.404 |
| C3 |
H3 |
1.080 |
1.080 |
| C5 |
C4 |
1.402 |
1.417 |
| C4 |
C7 |
1.403 |
1.411 |
| C6 |
C5 |
1.408 |
1.406 |
| C10 |
C5 |
1.413 |
1.405 |
| S11 |
C6 |
1.595 |
1.762 |
| C10 |
C9 |
1.397 |
1.362 |
| C9 |
C8 |
1.394 |
1.392 |
| C9 |
H9 |
1.080 |
1.080 |
| C10 |
H10 |
1.080 |
1.080 |
| O14 |
S11 |
1.478 |
1.522 |
| O14 |
HO14 |
0.950 |
0.967 |
| O13 |
S11 |
1.481 |
1.421 |
| O12 |
S11 |
1.478 |
1.421 |
| C8 |
C7 |
1.394 |
1.379 |
| C8 |
H8 |
1.080 |
1.080 |
| C7 |
N15 |
1.362 |
1.393 |
| N15 |
HN15 |
0.999 |
0.970 |
| N15 |
HN1A |
1.000 |
0.970 |
Bond Angles for 5NS
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C1 |
H1 |
119.6 |
119.5 |
| C2 |
C1 |
H1 |
119.6 |
119.5 |
| C1 |
C2 |
C3 |
119.0 |
121.0 |
| C1 |
C2 |
H2 |
120.5 |
119.5 |
| C3 |
C2 |
H2 |
120.5 |
119.5 |
| C2 |
C3 |
H3 |
119.5 |
120.2 |
| C4 |
C3 |
H3 |
119.6 |
120.1 |
| C5 |
C4 |
C7 |
120.5 |
119.3 |
| C4 |
C7 |
C8 |
119.6 |
119.4 |
| C4 |
C7 |
N15 |
122.0 |
120.3 |
| C10 |
C9 |
C8 |
120.2 |
121.1 |
| C10 |
C9 |
H9 |
119.9 |
119.5 |
| C8 |
C9 |
H9 |
119.9 |
119.5 |
| C9 |
C8 |
C7 |
120.5 |
120.8 |
| C9 |
C8 |
H8 |
119.8 |
119.6 |
| S11 |
O14 |
HO14 |
109.5 |
114.0 |
| C7 |
C8 |
H8 |
119.7 |
119.6 |
| C8 |
C7 |
N15 |
118.4 |
120.3 |
| C7 |
N15 |
HN15 |
109.5 |
120.0 |
| C7 |
N15 |
HN1A |
109.5 |
120.0 |
| HN15 |
N15 |
HN1A |
109.4 |
120.0 |
Torsion Angles for 5NS
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
C6 |
H1 |
180.0 |
179.7 |
| C6 |
C1 |
C2 |
H2 |
180.0 |
180.3 |
| C6 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
| C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
| C1 |
C2 |
C3 |
H3 |
180.2 |
179.9 |
| H1 |
C1 |
C2 |
C3 |
180.0 |
180.0 |
| H1 |
C1 |
C2 |
H2 |
359.9 |
0.0 |
| C3 |
C2 |
C1 |
H1 |
180.0 |
180.0 |
| C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
| C4 |
C3 |
C2 |
H3 |
180.0 |
180.1 |
| H2 |
C2 |
C1 |
H1 |
359.9 |
0.0 |
| C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
| H2 |
C2 |
C3 |
H3 |
0.2 |
359.9 |
| C4 |
C3 |
C2 |
H2 |
180.2 |
180.0 |
| C2 |
C3 |
C4 |
H3 |
180.0 |
179.9 |
| H3 |
C3 |
C2 |
H2 |
0.2 |
359.9 |
| C5 |
C4 |
C3 |
H3 |
179.6 |
180.1 |
| C5 |
C4 |
C7 |
C8 |
0.1 |
360.0 |
| C5 |
C4 |
C7 |
N15 |
180.0 |
180.0 |
| C7 |
C4 |
C3 |
H3 |
359.9 |
0.1 |
| C9 |
C8 |
C7 |
C4 |
359.9 |
360.0 |
| C4 |
C7 |
C8 |
H8 |
179.9 |
180.0 |
| C8 |
C7 |
C4 |
N15 |
180.1 |
180.0 |
| C4 |
C7 |
N15 |
HN15 |
219.7 |
0.0 |
| C4 |
C7 |
N15 |
HN1A |
339.7 |
180.0 |
| C5 |
C6 |
C1 |
H1 |
180.0 |
179.7 |
| C6 |
C5 |
C4 |
C7 |
180.1 |
179.7 |
| C10 |
C5 |
C4 |
C7 |
359.9 |
0.0 |
| S11 |
C6 |
C1 |
H1 |
359.5 |
0.3 |
| C8 |
C9 |
C10 |
H9 |
180.0 |
180.0 |
| C10 |
C9 |
C8 |
C7 |
0.1 |
0.0 |
| C10 |
C9 |
C8 |
H8 |
180.1 |
180.0 |
| C4 |
C7 |
C8 |
C9 |
359.9 |
360.0 |
| C10 |
C9 |
C8 |
H9 |
180.0 |
180.0 |
| C7 |
C8 |
C9 |
H8 |
180.0 |
180.0 |
| C9 |
C8 |
C7 |
N15 |
180.0 |
180.0 |
| C10 |
C9 |
H9 |
C8 |
180.0 |
180.0 |
| H9 |
C9 |
C8 |
C7 |
180.1 |
180.0 |
| H9 |
C9 |
C8 |
H8 |
0.1 |
359.9 |
| H10 |
C10 |
C9 |
C8 |
179.9 |
180.0 |
| H10 |
C10 |
C9 |
H9 |
359.9 |
0.0 |
| O13 |
S11 |
O14 |
HO14 |
220.2 |
293.6 |
| O12 |
S11 |
O14 |
HO14 |
101.4 |
66.5 |
| C4 |
C7 |
C8 |
N15 |
179.9 |
180.0 |
| C7 |
C8 |
C9 |
H9 |
180.1 |
180.0 |
| C9 |
C8 |
C7 |
H8 |
180.0 |
180.0 |
| C8 |
C7 |
N15 |
HN15 |
39.6 |
180.0 |
| C8 |
C7 |
N15 |
HN1A |
159.6 |
360.0 |
| H8 |
C8 |
C9 |
H9 |
0.1 |
359.9 |
| C9 |
C8 |
H8 |
C7 |
180.0 |
180.0 |
| H8 |
C8 |
C7 |
N15 |
0.0 |
0.0 |
| C4 |
C7 |
N15 |
C8 |
180.1 |
180.0 |
| N15 |
C7 |
C8 |
H8 |
0.0 |
0.0 |
| HN15 |
N15 |
C7 |
HN1A |
240.0 |
180.1 |
| C7 |
N15 |
HN15 |
HN1A |
120.0 |
179.9 |
| C7 |
N15 |
HN1A |
HN15 |
240.0 |
180.1 |