PDB Chemical Component 5MP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5MP

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.477 1.408
C1 C3 1.340 1.348
C1 C4 1.505 1.507
C2 C5 1.343 1.349
C2 HC2 1.103 1.080
C3 N6 1.361 1.363
C3 HC3 1.103 1.080
C4 HC41 1.115 1.090
C4 HC42 1.115 1.088
C4 HC43 1.115 1.089
C5 N6 1.360 1.363
C5 HC5 1.104 1.080
N6 HN6 1.020 0.970

Bond Angles for 5MP

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C3 106.2 107.4
C2 C1 C4 126.3 126.2
C1 C2 C5 105.5 107.4
C1 C2 HC2 130.9 126.4
C3 C1 C4 127.5 126.3
C1 C3 N6 109.7 108.2
C1 C3 HC3 124.5 125.9
C1 C4 HC41 106.3 109.4
C1 C4 HC42 126.3 109.5
C1 C4 HC43 106.3 109.4
C5 C2 HC2 123.6 126.2
C2 C5 N6 110.0 108.2
C2 C5 HC5 124.5 125.9
N6 C3 HC3 125.8 125.8
C3 N6 C5 108.6 108.7
C3 N6 HN6 125.8 125.6
HC41 C4 HC42 106.3 109.5
HC41 C4 HC43 103.2 109.4
HC42 C4 HC43 106.3 109.6
N6 C5 HC5 125.5 125.9
C5 N6 HN6 125.6 125.7

Torsion Angles for 5MP

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 C1 C2 C4 179.8 179.7
C2 C1 C3 N6 0.1 0.3
C2 C1 C3 HC3 180.1 180.2
C2 C1 C4 HC41 54.7 269.6
C2 C1 C4 HC42 180.0 29.6
C2 C1 C4 HC43 305.2 149.8
C5 C2 C1 HC2 180.0 179.6
C1 C2 C5 N6 359.4 0.4
C1 C2 C5 HC5 179.4 180.1
C2 C1 C3 C4 180.2 180.3
C3 C1 C2 C5 0.3 359.6
C3 C1 C2 HC2 180.3 180.0
C3 C1 C4 HC41 235.0 90.0
C3 C1 C4 HC42 0.3 210.0
C3 C1 C4 HC43 125.5 330.1
N6 C3 C1 HC3 180.0 180.1
C1 C3 N6 C5 359.5 360.0
C1 C3 N6 HN6 179.5 180.0
C2 C1 C4 C3 179.7 179.6
C4 C1 C2 C5 180.5 179.9
C4 C1 C2 HC2 0.5 0.3
C4 C1 C3 N6 179.9 180.0
C4 C1 C3 HC3 359.9 359.9
HC41 C4 C1 HC42 234.7 240.0
HC41 C4 C1 HC43 109.5 119.9
HC42 C4 C1 HC43 234.8 239.9
C5 C2 C1 C3 0.3 359.6
C5 C2 C1 C4 180.5 179.9
C1 C2 C5 HC2 180.0 180.4
C3 N6 C5 C2 0.7 359.8
N6 C5 C2 HC5 180.0 180.2
C2 C5 N6 HN6 180.7 179.7
HC2 C2 C1 C3 180.3 180.0
HC2 C2 C1 C4 0.5 0.3
C1 C2 HC2 C5 180.0 179.5
HC2 C2 C5 N6 179.4 180.0
HC2 C2 C5 HC5 359.4 359.8
N6 C3 C1 C4 179.9 180.0
C1 C3 N6 HC3 180.0 179.9
C2 C5 N6 C3 0.7 359.8
C3 N6 C5 HC5 180.7 180.0
C5 N6 C3 HN6 180.0 180.0
HC3 C3 C1 C4 359.9 359.9
C1 C3 HC3 N6 180.0 180.1
HC3 C3 N6 C5 179.5 180.0
HC3 C3 N6 HN6 359.5 0.1
C1 C4 HC41 HC42 136.7 120.0
C1 C4 HC41 HC43 248.4 240.1
HC42 C4 HC41 HC43 111.6 120.1
C1 C4 HC42 HC41 234.7 240.0
C1 C4 HC42 HC43 125.2 120.0
HC41 C4 HC42 HC43 250.5 240.0
C1 C4 HC43 HC41 111.7 119.9
C1 C4 HC43 HC42 223.3 239.9
HC41 C4 HC43 HC42 111.7 120.1
N6 C5 C2 HC2 179.4 180.0
C2 C5 N6 HC5 180.0 179.8
C5 N6 C3 HC3 179.5 180.0
C3 N6 C5 HN6 180.0 180.0
HC5 C5 C2 HC2 359.4 359.8
C2 C5 HC5 N6 180.0 180.3
HC5 C5 N6 HN6 0.7 360.0
HN6 N6 C3 HC3 359.5 0.1
C3 N6 HN6 C5 180.0 180.0
HN6 N6 C5 HC5 0.7 360.0