PDB Chemical Component 5MP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 5MP
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.477 |
1.408 |
C1 |
C3 |
1.340 |
1.348 |
C1 |
C4 |
1.505 |
1.507 |
C2 |
C5 |
1.343 |
1.349 |
C2 |
HC2 |
1.103 |
1.080 |
C3 |
N6 |
1.361 |
1.363 |
C3 |
HC3 |
1.103 |
1.080 |
C4 |
HC41 |
1.115 |
1.090 |
C4 |
HC42 |
1.115 |
1.088 |
C4 |
HC43 |
1.115 |
1.089 |
C5 |
N6 |
1.360 |
1.363 |
C5 |
HC5 |
1.104 |
1.080 |
N6 |
HN6 |
1.020 |
0.970 |
Bond Angles for 5MP
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C3 |
106.2 |
107.4 |
C2 |
C1 |
C4 |
126.3 |
126.2 |
C1 |
C2 |
C5 |
105.5 |
107.4 |
C1 |
C2 |
HC2 |
130.9 |
126.4 |
C3 |
C1 |
C4 |
127.5 |
126.3 |
C1 |
C3 |
N6 |
109.7 |
108.2 |
C1 |
C3 |
HC3 |
124.5 |
125.9 |
C1 |
C4 |
HC41 |
106.3 |
109.4 |
C1 |
C4 |
HC42 |
126.3 |
109.5 |
C1 |
C4 |
HC43 |
106.3 |
109.4 |
C5 |
C2 |
HC2 |
123.6 |
126.2 |
C2 |
C5 |
N6 |
110.0 |
108.2 |
C2 |
C5 |
HC5 |
124.5 |
125.9 |
N6 |
C3 |
HC3 |
125.8 |
125.8 |
C3 |
N6 |
C5 |
108.6 |
108.7 |
C3 |
N6 |
HN6 |
125.8 |
125.6 |
HC41 |
C4 |
HC42 |
106.3 |
109.5 |
HC41 |
C4 |
HC43 |
103.2 |
109.4 |
HC42 |
C4 |
HC43 |
106.3 |
109.6 |
N6 |
C5 |
HC5 |
125.5 |
125.9 |
C5 |
N6 |
HN6 |
125.6 |
125.7 |
Torsion Angles for 5MP
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C1 |
C2 |
C4 |
179.8 |
179.7 |
C2 |
C1 |
C3 |
N6 |
0.1 |
0.3 |
C2 |
C1 |
C3 |
HC3 |
180.1 |
180.2 |
C2 |
C1 |
C4 |
HC41 |
54.7 |
269.6 |
C2 |
C1 |
C4 |
HC42 |
180.0 |
29.6 |
C2 |
C1 |
C4 |
HC43 |
305.2 |
149.8 |
C5 |
C2 |
C1 |
HC2 |
180.0 |
179.6 |
C1 |
C2 |
C5 |
N6 |
359.4 |
0.4 |
C1 |
C2 |
C5 |
HC5 |
179.4 |
180.1 |
C2 |
C1 |
C3 |
C4 |
180.2 |
180.3 |
C3 |
C1 |
C2 |
C5 |
0.3 |
359.6 |
C3 |
C1 |
C2 |
HC2 |
180.3 |
180.0 |
C3 |
C1 |
C4 |
HC41 |
235.0 |
90.0 |
C3 |
C1 |
C4 |
HC42 |
0.3 |
210.0 |
C3 |
C1 |
C4 |
HC43 |
125.5 |
330.1 |
N6 |
C3 |
C1 |
HC3 |
180.0 |
180.1 |
C1 |
C3 |
N6 |
C5 |
359.5 |
360.0 |
C1 |
C3 |
N6 |
HN6 |
179.5 |
180.0 |
C2 |
C1 |
C4 |
C3 |
179.7 |
179.6 |
C4 |
C1 |
C2 |
C5 |
180.5 |
179.9 |
C4 |
C1 |
C2 |
HC2 |
0.5 |
0.3 |
C4 |
C1 |
C3 |
N6 |
179.9 |
180.0 |
C4 |
C1 |
C3 |
HC3 |
359.9 |
359.9 |
HC41 |
C4 |
C1 |
HC42 |
234.7 |
240.0 |
HC41 |
C4 |
C1 |
HC43 |
109.5 |
119.9 |
HC42 |
C4 |
C1 |
HC43 |
234.8 |
239.9 |
C5 |
C2 |
C1 |
C3 |
0.3 |
359.6 |
C5 |
C2 |
C1 |
C4 |
180.5 |
179.9 |
C1 |
C2 |
C5 |
HC2 |
180.0 |
180.4 |
C3 |
N6 |
C5 |
C2 |
0.7 |
359.8 |
N6 |
C5 |
C2 |
HC5 |
180.0 |
180.2 |
C2 |
C5 |
N6 |
HN6 |
180.7 |
179.7 |
HC2 |
C2 |
C1 |
C3 |
180.3 |
180.0 |
HC2 |
C2 |
C1 |
C4 |
0.5 |
0.3 |
C1 |
C2 |
HC2 |
C5 |
180.0 |
179.5 |
HC2 |
C2 |
C5 |
N6 |
179.4 |
180.0 |
HC2 |
C2 |
C5 |
HC5 |
359.4 |
359.8 |
N6 |
C3 |
C1 |
C4 |
179.9 |
180.0 |
C1 |
C3 |
N6 |
HC3 |
180.0 |
179.9 |
C2 |
C5 |
N6 |
C3 |
0.7 |
359.8 |
C3 |
N6 |
C5 |
HC5 |
180.7 |
180.0 |
C5 |
N6 |
C3 |
HN6 |
180.0 |
180.0 |
HC3 |
C3 |
C1 |
C4 |
359.9 |
359.9 |
C1 |
C3 |
HC3 |
N6 |
180.0 |
180.1 |
HC3 |
C3 |
N6 |
C5 |
179.5 |
180.0 |
HC3 |
C3 |
N6 |
HN6 |
359.5 |
0.1 |
C1 |
C4 |
HC41 |
HC42 |
136.7 |
120.0 |
C1 |
C4 |
HC41 |
HC43 |
248.4 |
240.1 |
HC42 |
C4 |
HC41 |
HC43 |
111.6 |
120.1 |
C1 |
C4 |
HC42 |
HC41 |
234.7 |
240.0 |
C1 |
C4 |
HC42 |
HC43 |
125.2 |
120.0 |
HC41 |
C4 |
HC42 |
HC43 |
250.5 |
240.0 |
C1 |
C4 |
HC43 |
HC41 |
111.7 |
119.9 |
C1 |
C4 |
HC43 |
HC42 |
223.3 |
239.9 |
HC41 |
C4 |
HC43 |
HC42 |
111.7 |
120.1 |
N6 |
C5 |
C2 |
HC2 |
179.4 |
180.0 |
C2 |
C5 |
N6 |
HC5 |
180.0 |
179.8 |
C5 |
N6 |
C3 |
HC3 |
179.5 |
180.0 |
C3 |
N6 |
C5 |
HN6 |
180.0 |
180.0 |
HC5 |
C5 |
C2 |
HC2 |
359.4 |
359.8 |
C2 |
C5 |
HC5 |
N6 |
180.0 |
180.3 |
HC5 |
C5 |
N6 |
HN6 |
0.7 |
360.0 |
HN6 |
N6 |
C3 |
HC3 |
359.5 |
0.1 |
C3 |
N6 |
HN6 |
C5 |
180.0 |
180.0 |
HN6 |
N6 |
C5 |
HC5 |
0.7 |
360.0 |