PDB Chemical Component 5LO

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5LO

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C04 C03 1.520 1.533
C04 C05 1.521 1.528
C06 C05 1.539 1.530
C03 C02 1.520 1.527
C05 C07 1.549 1.530
C05 C10 1.553 1.506
C08 C02 1.533 1.530
C02 C01 1.532 1.530
C02 C09 1.536 1.507
C10 C09 1.414 1.377
C10 C11 1.418 1.390
C09 C12 1.425 1.387
C11 C15 1.407 1.376
O27 C25 1.265 1.214
C28 C29 1.403 1.379
C28 C24 1.393 1.396
C29 C21 1.400 1.384
C12 C13 1.392 1.390
C25 C24 1.538 1.478
C25 O26 1.261 1.348
C15 C13 1.423 1.388
C15 C16 1.488 1.517
C24 C23 1.399 1.397
C13 O14 1.518 1.361
C21 C16 1.586 1.507
C21 C22 1.404 1.384
C16 C20 1.599 1.538
C16 C17 1.519 1.556
C23 C22 1.386 1.379
C20 C19 1.339 1.542
O14 C17 1.441 1.433
C19 C18 1.637 1.573
C17 C18 1.387 1.546
C17 H1 1.100 1.090
C20 H2 1.100 1.090
C20 H3 1.100 1.090
C22 H4 1.080 1.080
C28 H5 1.080 1.081
C01 H6 1.100 1.090
C01 H7 1.100 1.090
C01 H8 1.100 1.090
C03 H9 1.100 1.090
C03 H10 1.100 1.089
C04 H11 1.100 1.090
C04 H12 1.100 1.090
C06 H13 1.100 1.090
C06 H14 1.100 1.090
C06 H15 1.099 1.091
C07 H16 1.100 1.090
C07 H17 1.100 1.090
C07 H18 1.100 1.090
C08 H19 1.100 1.090
C08 H20 1.100 1.089
C08 H21 1.100 1.091
C11 H22 1.080 1.080
C12 H23 1.080 1.080
C18 H24 1.099 1.089
C18 H25 1.100 1.090
C19 H26 1.100 1.089
C19 H27 1.100 1.090
C23 H28 1.080 1.080
O26 H29 0.950 0.967
C29 H30 1.080 1.080

Bond Angles for 5LO

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C04 C03 H9 108.3 109.7
C04 C03 H10 108.3 109.7
C04 C05 C07 111.5 109.2
C05 C04 H11 108.7 109.7
C05 C04 H12 108.7 109.7
C06 C05 C07 107.7 109.2
C03 C02 C09 113.4 110.6
C05 C07 H16 109.5 109.4
C05 C07 H17 109.4 109.5
C05 C07 H18 109.5 109.5
C05 C10 C09 122.2 122.7
C05 C10 C11 118.7 117.8
C08 C02 C09 109.9 109.2
C02 C01 H6 109.5 109.5
C02 C01 H7 109.5 109.5
C02 C01 H8 109.5 109.5
C10 C09 C02 121.6 122.4
C02 C09 C12 116.9 117.7
C09 C10 C11 119.1 119.5
C10 C09 C12 121.4 119.9
C10 C11 C15 118.9 120.5
C10 C11 H22 120.6 119.8
C09 C12 H23 120.4 119.6
C11 C15 C16 131.2 132.2
C29 C28 H5 119.6 120.1
C28 C29 H30 119.5 120.0
C28 C24 C23 118.7 119.7
C12 C13 O14 131.2 130.0
C25 O26 H29 109.5 117.0
C15 C13 O14 109.1 111.3
C15 C16 C21 110.1 112.8
C15 C16 C20 127.5 108.9
C15 C16 C17 109.1 101.8
C24 C23 H28 120.0 120.1
C13 O14 C17 108.0 109.8
C22 C21 C16 116.4 119.9
C21 C22 H4 118.8 119.9
C16 C20 C19 94.3 106.8
C16 C20 H2 113.1 110.5
C16 C20 H3 113.1 109.6
C16 C17 C18 103.9 104.0
C16 C17 H1 107.9 113.7
C23 C22 H4 118.9 120.0
C20 C19 C18 106.3 104.0
C19 C20 H2 113.2 109.9
C19 C20 H3 113.2 110.0
C20 C19 H26 110.2 110.6
C20 C19 H27 110.2 110.5
O14 C17 C18 120.7 109.3
O14 C17 H1 108.9 113.0
C19 C18 H24 110.8 109.8
C19 C18 H25 110.7 112.0
C18 C17 H1 109.7 112.9
C17 C18 H24 110.7 110.8
C17 C18 H25 110.8 110.7
H2 C20 H3 109.4 110.0
H6 C01 H7 109.5 109.4
H6 C01 H8 109.4 109.4
H7 C01 H8 109.5 109.5
H9 C03 H10 109.5 109.7
H11 C04 H12 109.5 109.8
H13 C06 H14 109.5 109.4
H13 C06 H15 109.5 109.5
H14 C06 H15 109.5 109.5
H16 C07 H17 109.5 109.5
H16 C07 H18 109.5 109.5
H17 C07 H18 109.5 109.4
H19 C08 H20 109.5 109.5
H19 C08 H21 109.4 109.4
H20 C08 H21 109.5 109.5
H24 C18 H25 109.4 110.7
H26 C19 H27 109.5 110.6

Torsion Angles for 5LO

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C04 C03 C02 C09 39.4 51.3
H9 C03 C04 H10 241.4 120.5
C05 C04 C03 H9 62.1 170.5
C05 C04 C03 H10 180.7 49.9
C06 C05 C04 C07 242.8 240.6
C04 C05 C07 H16 180.0 60.0
C04 C05 C07 H17 300.0 180.0
C04 C05 C07 H18 60.0 300.0
C04 C05 C10 C09 342.6 342.4
C04 C05 C10 C11 164.4 162.8
H11 C04 C05 H12 119.1 120.6
C04 C05 C06 C07 119.7 119.4
C06 C05 C04 H11 47.7 51.6
C06 C05 C04 H12 288.6 291.0
C06 C05 C07 H16 296.5 179.4
C06 C05 C07 H17 56.5 299.4
C06 C05 C07 H18 176.5 59.4
C06 C05 C10 C09 223.0 222.0
C06 C05 C10 C11 44.8 42.4
C08 C02 C03 C09 236.1 239.7
C03 C02 C01 H6 180.0 298.9
C03 C02 C01 H7 300.0 58.9
C03 C02 C01 H8 60.0 178.9
C10 C09 C02 C03 349.4 342.0
C03 C02 C09 C12 168.8 162.1
C07 C05 C04 H11 164.9 171.0
C07 C05 C04 H12 45.8 50.4
C07 C05 C10 C09 105.1 102.6
C07 C05 C10 C11 286.9 283.0
H16 C07 C05 H17 240.0 240.0
H16 C07 C05 H18 120.0 120.0
H17 C07 C05 H18 240.0 240.0
C05 C10 C09 C02 359.9 0.8
C09 C10 C05 C11 178.2 179.6
C05 C10 C09 C12 180.6 180.7
C05 C10 C11 C15 183.4 179.3
C05 C10 C11 H22 3.4 359.2
C03 C02 C08 C09 125.8 121.1
C08 C02 C01 H6 59.9 179.5
C08 C02 C01 H7 179.9 299.4
C08 C02 C01 H8 299.9 59.5
C10 C09 C02 C08 113.5 102.3
C08 C02 C09 C12 292.9 282.3
C10 C09 C02 C01 231.5 221.7
H6 C01 C02 H7 240.0 240.0
H6 C01 C02 H8 120.0 120.0
H7 C01 C02 H8 240.0 239.9
C09 C02 C01 H6 301.5 60.0
C09 C02 C01 H7 61.6 180.0
C09 C02 C01 H8 181.6 300.1
C02 C09 C10 C11 178.1 180.4
C10 C09 C02 C12 180.6 179.9
C02 C09 C12 H23 0.7 359.7
C03 C02 C09 C10 349.4 342.0
C05 C10 C09 C11 181.8 180.4
C08 C02 C09 C10 113.5 102.3
C02 C09 C10 C12 179.3 180.1
C09 C10 C11 C15 5.1 359.7
C09 C10 C11 H22 185.1 179.6
C10 C09 C12 H23 180.1 179.8
C05 C10 C11 C09 178.3 179.6
C11 C10 C09 C02 178.1 180.4
C11 C10 C09 C12 358.8 0.3
C10 C11 C15 C16 184.4 180.7
C10 C09 C12 C02 179.4 180.1
C12 C09 C10 C11 358.8 0.3
C09 C12 C13 O14 180.1 180.4
C10 C11 C15 H22 180.0 179.9
C11 C15 C13 O14 184.6 179.6
C11 C15 C16 C21 300.3 286.4
C11 C15 C16 C20 34.8 52.3
C11 C15 C16 C17 164.2 165.0
O27 C25 O26 H29 0.0 359.9
C29 C28 C24 C23 0.4 359.7
C28 C24 C23 H28 179.9 180.2
C29 C21 C22 H4 182.9 179.7
C10 C09 C12 C13 0.1 359.8
C15 C13 C12 O14 177.0 179.8
C12 C13 O14 C17 190.9 197.5
C25 C24 C23 H28 359.8 360.0
C10 C11 C15 C13 351.9 0.2
C12 C13 C15 O14 182.4 180.2
C15 C13 O14 C17 13.7 17.7
C16 C15 C13 O14 354.9 359.3
C22 C21 C16 C15 190.3 354.8
C15 C16 C20 C19 83.8 109.1
C15 C16 C20 H2 201.2 228.7
C15 C16 C20 H3 326.3 350.0
C15 C16 C17 C18 245.4 269.7
C15 C16 C17 H1 129.0 146.4
C24 C23 C22 H4 178.4 180.0
C13 O14 C17 C18 100.8 84.1
C13 O14 C17 H1 229.0 210.8
C15 C16 C21 C20 126.9 123.8
C15 C16 C21 C17 230.3 245.2
C16 C21 C22 H4 359.3 0.1
C21 C16 C20 C19 192.5 235.1
C21 C16 C20 H2 309.9 354.6
C21 C16 C20 H3 75.1 116.0
C21 C16 C17 C18 115.3 148.4
C21 C16 C17 H1 358.9 25.2
C15 C16 C21 C22 190.3 354.8
C23 C22 C21 H4 180.0 180.0
C15 C16 C20 C21 251.3 234.0
C15 C16 C20 C17 130.5 109.3
C20 C16 C17 C18 25.8 23.8
C20 C16 C17 H1 269.3 260.6
C16 C20 C19 C18 46.6 336.8
C19 C20 C16 H2 242.6 240.4
C19 C20 C16 H3 117.4 119.1
C16 C20 C19 H26 166.1 95.5
C16 C20 C19 H27 287.1 218.2
H2 C20 C16 H3 234.9 238.6
C15 C16 C17 C21 130.1 121.3
C15 C16 C17 C20 219.6 245.9
O14 C17 C16 C18 127.6 114.1
O14 C17 C16 H1 244.0 237.3
C18 C17 C16 H1 116.4 123.3
C16 C17 C18 H24 242.9 79.6
C16 C17 C18 H25 121.2 202.7
C21 C22 C23 H4 180.0 180.0
C16 C20 C19 H2 117.4 119.9
C16 C20 C19 H3 242.6 241.2
C20 C19 C18 H24 83.6 279.8
C20 C19 C18 H25 205.2 156.5
H2 C20 C19 H3 125.2 121.2
H26 C19 C20 H27 239.0 237.3
C15 C16 C17 O14 13.0 23.8
C16 C17 O14 C18 243.4 249.9
C16 C17 O14 H1 115.3 123.1
C18 C17 O14 H1 231.8 233.3
O14 C17 C18 H24 125.8 330.1
O14 C17 C18 H25 4.2 93.2
C18 C19 C20 H2 289.2 216.9
C18 C19 C20 H3 164.0 95.7
C20 C19 C18 H26 119.5 118.7
C20 C19 C18 H27 240.5 241.4
C19 C18 C17 H1 117.2 86.1
C17 C18 C19 H24 240.8 117.9
C17 C18 C19 H25 119.2 241.2
H24 C18 C19 H25 238.4 123.3
C16 C17 C18 H1 244.8 236.2
C20 C19 C18 C17 324.4 37.7
O14 C17 C18 H1 127.8 126.8
C19 C18 C17 H24 119.2 242.8
C19 C18 C17 H25 240.8 119.7
H24 C18 C17 H25 121.6 236.9
C16 C17 H1 C18 112.6 118.2
O14 C17 H1 C18 225.9 235.2
H1 C17 C18 H24 358.0 203.3
H1 C17 C18 H25 236.4 326.5
C16 C20 H2 C19 254.3 242.3
C16 C20 H2 H3 127.1 121.1
H2 C20 C19 C18 289.2 216.9
C19 C20 H2 H3 232.8 238.8
H2 C20 C19 H26 48.7 335.6
H2 C20 C19 H27 169.7 98.3
C16 C20 H3 C19 105.7 117.1
C16 C20 H3 H2 232.9 238.3
H3 C20 C19 C18 164.0 95.7
C19 C20 H3 H2 127.2 121.2
H3 C20 C19 H26 283.5 214.4
H3 C20 C19 H27 44.5 337.1
H4 C22 C21 C16 359.3 0.1
H5 C28 C29 H30 1.0 0.0
H5 C28 C24 C23 180.4 179.8
C02 C01 H6 H7 120.0 120.0
C02 C01 H6 H8 240.0 240.0
H7 C01 H6 H8 120.0 120.0
C02 C01 H7 H6 240.0 240.0
C02 C01 H7 H8 120.0 120.1
H6 C01 H7 H8 240.0 240.1
C02 C01 H8 H6 120.0 120.0
C02 C01 H8 H7 240.0 239.9
H6 C01 H8 H7 120.0 119.9
C04 C03 H9 H10 117.9 239.4
H9 C03 C02 C09 278.7 171.0
C04 C03 H10 H9 242.1 120.5
H10 C03 C02 C09 160.1 291.6
H11 C04 C03 H9 182.5 290.1
H11 C04 C03 H10 301.1 169.6
H11 C04 C05 C07 164.9 171.0
C05 C04 H11 H12 241.4 239.5
H12 C04 C03 H9 301.6 50.7
H12 C04 C03 H10 60.2 290.2
H12 C04 C05 C07 45.8 50.4
C05 C04 H12 H11 118.6 120.5
H13 C06 C05 C07 60.3 300.6
H14 C06 H13 H15 120.0 120.0
H14 C06 C05 C07 180.3 60.6
H13 C06 H14 H15 240.0 240.0
H15 C06 C05 C07 300.2 180.6
H13 C06 H15 H14 120.0 120.0
C05 C07 H16 H17 120.0 120.0
C05 C07 H16 H18 240.0 240.0
H17 C07 H16 H18 120.0 120.0
C05 C07 H17 H16 240.0 240.0
C05 C07 H17 H18 120.0 120.0
H16 C07 H17 H18 240.0 240.0
C05 C07 H18 H16 120.0 120.0
C05 C07 H18 H17 240.0 240.0
H16 C07 H18 H17 120.0 120.0
H19 C08 C02 C09 54.1 179.4
H20 C08 H19 H21 120.0 120.0
H20 C08 C02 C09 174.1 299.5
H19 C08 H20 H21 240.0 240.0
H21 C08 C02 C09 294.2 59.5
H19 C08 H21 H20 120.0 120.0
C10 C11 H22 C15 180.0 180.1
H22 C11 C15 C16 4.4 0.8
H23 C12 C13 O14 0.1 0.4
C19 C18 H24 H25 122.4 235.9
H24 C18 C17 H1 358.0 203.3
C17 C18 H24 H25 237.6 123.1
C19 C18 H25 H24 237.6 122.8
H25 C18 C17 H1 236.4 326.5
C17 C18 H25 H24 122.4 236.8
C20 C19 H26 C18 242.9 245.3
H26 C19 C20 H2 48.7 335.6
H26 C19 C20 H3 283.5 214.4
C20 C19 H26 H27 121.4 122.7
H26 C19 C18 H24 324.1 161.1
H26 C19 C18 H25 85.7 37.8
C20 C19 H27 C18 117.1 114.6
H27 C19 C20 H2 169.7 98.3
H27 C19 C20 H3 44.5 337.1
C20 C19 H27 H26 238.6 237.3
H27 C19 C18 H24 203.0 38.4
H27 C19 C18 H25 324.7 275.1
H28 C23 C22 H4 358.4 0.0
H30 C29 C28 H5 1.0 0.0