PDB Chemical Component 5HK

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5HK

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C17	C16	1.519	1.506
C17	O5	1.224	1.213
N3	C17	1.347	1.347
C19	N3	1.465	1.465
C19	H191	1.100	1.089
C19	H193	1.100	1.090
C19	H192	1.100	1.091
C18	N3	1.465	1.464
C18	H182	1.100	1.090
C18	H181	1.100	1.090
C18	H183	1.100	1.090
C16	C15	1.515	1.508
C16	H9	1.100	1.090
C16	H8	1.100	1.091
C15	C20	1.390	1.382
C14	C15	1.389	1.381
C14	C13	1.397	1.390
C14	H7	1.079	1.081
C20	C21	1.385	1.382
C20	H10	1.080	1.079
C21	H11	1.080	1.080
C22	C21	1.392	1.388
C22	N4	1.408	1.401
C13	C22	1.400	1.391
N2	C13	1.410	1.394
N2	C12	1.349	1.323
N2	H6	1.000	0.970
C12	C11	1.498	1.467
O4	C12	1.231	1.216
N4	H12	1.000	0.970
C23	N4	1.407	1.389
C23	C24	1.390	1.386
C11	C23	1.408	1.408
C10	C11	1.393	1.400
C10	C9	1.382	1.375
C10	H5	1.080	1.080
C9	C8	1.394	1.396
C9	H4	1.080	1.080
C24	H13	1.081	1.080
C8	C24	1.393	1.400
C8	C4	1.496	1.482
C4	C5	1.397	1.393
C4	C3	1.399	1.395
C5	C6	1.389	1.385
C5	H3	1.080	1.080
C6	O3	1.374	1.360
C6	C1	1.412	1.388
C7	O3	1.426	1.429
C7	H71	1.101	1.090
C7	H72	1.100	1.090
C7	H73	1.100	1.090
C3	C2	1.381	1.380
C3	H2	1.080	1.080
C2	C1	1.384	1.383
C2	H1	1.080	1.080
C1	N1	1.467	1.480
N1	O1	1.222	1.217
O2	N1	1.220	1.218

Bond Angles for 5HK

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N3	C17	C16	118.3	120.0
C17	C16	C15	112.7	109.5
C17	C16	H9	108.7	109.5
C17	C16	H8	108.7	109.5
H191	C19	H193	109.5	109.5
H191	C19	H192	109.5	109.5
H193	C19	H192	109.5	109.4
H182	C18	H181	109.5	109.4
H182	C18	H183	109.5	109.5
H181	C18	H183	109.5	109.5
C15	C16	H9	108.6	109.4
C15	C16	H8	108.7	109.4
C16	C15	C20	121.0	119.9
H9	C16	H8	109.5	109.4
C14	C15	C20	118.5	120.2
C15	C20	C21	121.1	119.9
C15	C20	H10	119.4	120.1
C13	C14	H7	119.3	119.8
C14	C13	C22	119.1	119.4
C21	C20	H10	119.5	120.0
C20	C21	H11	120.0	119.9
C22	C21	H11	119.9	119.9
C13	C22	N4	121.9	120.7
C22	N4	H12	116.9	120.4
C12	N2	H6	110.8	116.4
N2	C12	C11	120.0	125.8
O4	C12	C11	119.4	117.1
C12	C11	C23	125.2	120.6
C23	N4	H12	116.9	120.5
C11	C23	C24	119.4	120.2
C23	C24	H13	118.9	120.0
C9	C10	H5	119.4	119.9
C10	C9	C8	121.3	120.3
C10	C9	H4	119.4	119.9
C8	C9	H4	119.4	119.9
C9	C8	C24	117.4	120.3
C9	C8	C4	121.7	120.0
C8	C24	H13	118.9	120.6
C8	C4	C5	120.8	120.1
C8	C4	C3	120.8	120.1
C5	C4	C3	118.0	119.8
C4	C5	C6	122.2	119.8
C4	C5	H3	118.9	120.1
C4	C3	C2	121.4	120.0
C4	C3	H2	119.3	120.0
C6	C5	H3	118.9	120.1
C5	C6	O3	124.1	120.0
C5	C6	C1	117.8	120.0
O3	C6	C1	118.1	120.0
C6	C1	C2	121.0	120.2
C6	C1	N1	122.5	119.9
H71	C7	H72	109.4	109.5
H71	C7	H73	109.5	109.5
H72	C7	H73	109.5	109.5
C2	C3	H2	119.3	120.0
C3	C2	C1	119.6	120.2
C3	C2	H1	120.2	119.9
C1	C2	H1	120.2	119.9
C2	C1	N1	116.5	119.9
C1	N1	O1	118.4	120.0

Torsion Angles for 5HK

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C15	C16	C17	H9	239.5	240.0
C15	C16	C17	H8	120.4	120.0
C17	C16	C15	C20	38.4	90.0
H9	C16	C17	H8	240.9	240.0
N3	C17	C16	C15	77.4	179.7
N3	C17	C16	H9	197.9	299.7
N3	C17	C16	H8	317.0	59.7
C19	N3	C17	C16	188.3	180.0
H193	C19	H191	H192	120.0	120.0
H191	C19	H193	H192	240.0	240.0
H191	C19	H192	H193	120.0	120.0
C18	N3	C17	C16	5.6	0.0
H181	C18	H182	H183	120.0	120.0
H182	C18	H181	H183	240.0	240.0
H182	C18	H183	H181	120.0	119.9
C17	C16	C15	H9	120.5	120.1
C17	C16	C15	H8	239.5	240.0
H9	C16	C15	H8	119.1	119.9
C14	C15	C16	C20	177.4	180.2
C16	C15	C20	C21	175.9	179.2
C16	C15	C20	H10	355.9	359.2
C17	C16	H9	C15	237.1	240.0
C17	C16	H9	H8	118.6	120.0
C15	C16	H9	H8	241.5	240.1
H9	C16	C15	C20	277.9	330.0
C17	C16	H8	C15	122.9	120.0
C17	C16	H8	H9	241.4	240.0
C15	C16	H8	H9	118.5	119.9
H8	C16	C15	C20	158.8	210.1
C20	C15	C16	H9	277.9	330.0
C20	C15	C16	H8	158.8	210.1
C21	C20	C15	H10	180.0	180.1
C15	C20	C21	H11	180.0	180.4
C14	C15	C16	H9	95.3	150.2
C14	C15	C16	H8	336.2	30.3
C16	C15	C14	C20	182.5	179.8
C14	C15	C20	C21	358.4	359.0
C14	C15	C20	H10	178.4	178.9
C13	C14	C15	C20	0.2	0.0
C14	C13	C22	N4	166.9	176.9
H7	C14	C15	C20	180.2	180.0
H7	C14	C13	C22	182.7	181.6
C15	C20	C21	H10	180.0	179.9
C22	C21	C20	H11	180.0	180.0
C15	C20	H10	C21	180.0	180.1
H10	C20	C21	H11	0.0	0.5
H11	C21	C20	H10	0.0	0.5
C14	C13	C22	C21	355.8	357.9
C22	C21	C20	H10	180.0	180.5
C20	C21	C22	H11	180.0	180.0
N4	C22	C21	H11	11.4	2.2
C23	N4	C22	H12	180.0	180.0
C22	C13	C14	H7	182.7	181.6
C13	C22	C21	H11	182.9	181.2
C13	C22	N4	H12	232.4	119.2
N2	C13	C14	H7	1.0	3.9
N2	C13	C22	N4	348.6	354.4
O4	C12	N2	C11	182.2	179.9
N2	C12	C11	C23	30.2	321.0
H6	N2	C12	C11	170.9	179.2
C11	C12	N2	H6	170.9	179.2
C12	C11	C23	C24	174.1	183.8
O4	C12	N2	H6	353.0	359.1
N2	C12	O4	C11	177.8	180.1
O4	C12	C11	C23	208.0	141.1
C22	N4	C23	H12	180.0	180.0
C12	C11	C23	N4	355.6	4.3
C24	C23	N4	H12	314.8	60.8
C9	C8	C24	C23	2.3	0.1
C8	C24	C23	H13	180.0	179.9
C11	C23	N4	H12	133.4	240.3
C11	C23	C24	H13	179.1	177.8
C10	C11	C23	C24	358.5	3.3
C8	C9	C10	H4	180.0	180.0
C10	C9	C8	C24	358.6	1.2
C10	C9	C8	C4	168.1	181.2
H5	C10	C9	C8	179.0	179.8
H5	C10	C9	H4	359.0	359.8
C8	C9	C10	H5	179.0	179.8
C10	C9	C8	H4	180.0	180.0
C9	C8	C24	H13	182.3	180.0
C9	C8	C4	C5	341.4	0.0
C9	C8	C4	C3	153.7	179.7
H4	C9	C10	H5	359.0	359.8
C10	C9	H4	C8	180.0	180.0
H4	C9	C8	C24	178.6	181.1
H4	C9	C8	C4	348.1	1.2
C23	C24	C8	H13	180.0	180.1
C24	C8	C9	H4	178.6	181.1
C9	C8	C24	C4	169.6	180.0
C4	C8	C9	H4	348.1	1.2
C9	C8	C4	C24	190.8	180.0
C4	C8	C24	H13	12.7	360.0
C5	C4	C8	C3	187.7	180.3
C8	C4	C5	C6	173.5	180.0
C8	C4	C5	H3	353.5	359.9
C8	C4	C3	C2	187.8	180.0
C8	C4	C3	H2	7.8	0.0
C8	C4	C5	C3	172.5	179.7
C5	C4	C3	C2	0.3	359.7
C5	C4	C3	H2	180.3	179.7
C6	C5	C4	H3	180.0	180.1
C4	C5	C6	O3	177.0	180.0
C4	C5	C6	C1	358.7	360.0
C8	C4	C3	C5	187.5	180.3
C3	C4	C5	C6	1.0	0.3
C3	C4	C5	H3	181.0	180.2
C2	C3	C4	H2	180.0	180.0
C4	C3	C2	C1	358.7	360.0
C4	C3	C2	H1	178.7	180.0
C6	C5	C4	C3	1.0	0.3
C4	C5	C6	H3	180.0	179.9
O3	C6	C5	C1	178.3	180.0
C5	C6	C1	C2	0.3	359.7
C5	C6	C1	N1	178.9	180.0
H3	C5	C4	C3	181.0	180.2
C4	C5	H3	C6	180.0	180.1
H3	C5	C6	O3	357.0	0.0
H3	C5	C6	C1	178.7	180.0
O3	C6	C5	H3	357.0	0.0
C5	C6	O3	C1	181.7	180.0
O3	C6	C1	C2	181.9	179.7
O3	C6	C1	N1	0.5	0.0
C1	C6	C5	H3	178.7	180.0
C5	C6	C1	O3	178.4	180.0
C3	C2	C1	C6	1.0	0.3
C6	C1	C2	H1	181.0	180.3
C2	C1	C6	N1	181.4	179.7
C6	C1	N1	O1	210.6	180.0
C7	O3	C6	C1	177.3	180.0
H72	C7	H71	H73	120.0	120.0
H71	C7	H72	H73	240.0	240.0
H71	C7	H73	H72	120.0	120.0
C4	C3	C2	H2	180.0	180.0
C6	C1	C2	C3	1.0	0.3
C1	C2	C3	H1	180.0	180.0
C3	C2	C1	N1	182.3	180.0
C4	C3	H2	C2	180.0	180.0
H2	C3	C2	C1	178.7	180.0
H2	C3	C2	H1	358.7	0.0
C6	C1	C2	N1	178.7	180.3
C1	C2	C3	H2	178.7	180.0
C3	C2	C1	H1	180.0	180.0
C2	C1	N1	O1	29.3	0.3
H1	C2	C3	H2	358.7	0.0
C3	C2	H1	C1	180.0	180.0
H1	C2	C1	N1	2.3	360.0
C6	C1	N1	C2	181.3	179.7
N1	C1	C2	H1	2.3	360.0