PDB Chemical Component 5H

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5H

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
S19 O20 1.443 1.421
S19 O21 1.435 1.421
S19 N22 1.745 1.656
S19 C24 1.782 1.762
N22 N1 1.478 1.401
N22 H22 1.000 0.970
C24 C25 1.411 1.382
C24 C30 1.415 1.382
C25 C26 1.405 1.383
C25 H25 1.080 1.080
C26 C27 1.410 1.382
C26 H26 1.080 1.079
C27 C29 1.410 1.383
C27 H27 1.080 1.079
C29 C30 1.407 1.382
C29 H29 1.080 1.080
C30 H30 1.080 1.080
C1 C2 1.525 1.507
C1 C14 1.551 1.530
C1 H11 1.100 1.090
C1 H12 1.100 1.089
C2 C4 1.409 1.383
C2 C3 1.406 1.383
C4 C5 1.403 1.382
C4 H4 1.080 1.080
C5 C8 1.412 1.383
C5 H5 1.080 1.081
C6 C8 1.409 1.383
C6 C3 1.402 1.383
C6 H6 1.080 1.080
C8 BR1 1.884 1.891
N1 C9 1.336 1.346
N1 C7 1.334 1.323
C9 S1 1.766 1.786
C9 S2 1.681 1.712
C14 C7 1.525 1.522
C14 S1 1.770 1.837
C14 H14 1.100 1.090
C7 O1 1.240 1.212
C3 H3 1.080 1.080

Bond Angles for 5H

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O20 S19 O21 120.1 125.4
O20 S19 N22 105.4 105.8
O20 S19 C24 109.3 105.8
O21 S19 N22 104.6 105.8
O21 S19 C24 109.8 105.8
N22 S19 C24 106.7 107.4
S19 N22 N1 115.6 120.0
S19 N22 H22 107.5 120.0
S19 C24 C25 120.0 120.0
S19 C24 C30 119.9 120.0
N1 N22 H22 107.5 120.0
N22 N1 C9 119.5 118.4
N22 N1 C7 126.6 118.3
C25 C24 C30 120.1 120.0
C24 C25 C26 120.0 120.0
C24 C25 H25 120.0 120.0
C24 C30 C29 120.0 120.1
C24 C30 H30 120.0 119.9
C26 C25 H25 120.0 120.0
C25 C26 C27 119.8 120.0
C25 C26 H26 120.1 120.0
C27 C26 H26 120.1 120.0
C26 C27 C29 120.6 120.0
C26 C27 H27 119.7 120.0
C29 C27 H27 119.7 120.0
C27 C29 C30 119.6 120.0
C27 C29 H29 120.2 120.0
C30 C29 H29 120.2 120.0
C29 C30 H30 120.0 120.0
C2 C1 C14 112.8 109.4
C2 C1 H11 107.7 109.5
C2 C1 H12 108.4 109.5
C1 C2 C4 120.2 120.0
C1 C2 C3 119.2 120.0
C14 C1 H11 107.7 109.5
C14 C1 H12 108.4 109.5
C1 C14 C7 111.9 111.3
C1 C14 S1 113.7 111.3
C1 C14 H14 102.9 111.2
H11 C1 H12 112.0 109.5
C4 C2 C3 120.7 120.0
C2 C4 C5 119.6 120.0
C2 C4 H4 120.2 120.0
C2 C3 C6 119.7 120.0
C2 C3 H3 120.1 120.0
C5 C4 H4 120.2 120.0
C4 C5 C8 119.8 120.0
C4 C5 H5 120.1 120.0
C8 C5 H5 120.1 120.0
C5 C8 C6 120.3 120.0
C5 C8 BR1 120.2 120.0
C8 C6 C3 119.9 120.0
C8 C6 H6 120.0 120.1
C6 C8 BR1 119.5 120.0
C3 C6 H6 120.1 119.9
C6 C3 H3 120.1 120.0
C9 N1 C7 113.8 123.3
N1 C9 S1 111.5 103.9
N1 C9 S2 127.3 128.1
N1 C7 C14 115.9 115.4
N1 C7 O1 121.3 122.3
S1 C9 S2 121.1 128.1
C9 S1 C14 92.0 97.6
C7 C14 S1 102.4 99.9
C7 C14 H14 114.0 111.3
C14 C7 O1 122.8 122.3
S1 C14 H14 112.4 111.3

Torsion Angles for 5H

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O21 S19 O20 N22 242.5 236.9
O21 S19 O20 C24 128.1 123.1
N22 S19 O20 C24 245.6 246.3
O20 S19 N22 N1 214.0 172.6
O20 S19 N22 H22 334.0 352.5
O20 S19 C24 C25 154.6 157.1
O20 S19 C24 C30 334.5 337.4
O20 S19 O21 N22 117.9 123.1
O20 S19 O21 C24 232.1 236.9
N22 S19 O21 C24 114.2 113.7
O21 S19 N22 N1 341.4 307.4
O21 S19 N22 H22 101.5 127.4
O21 S19 C24 C25 21.0 22.3
O21 S19 C24 C30 200.8 202.6
O20 S19 N22 O21 232.5 225.2
O20 S19 N22 C24 116.1 112.6
O21 S19 N22 C24 243.6 247.4
N22 S19 C24 C25 268.1 269.7
N22 S19 C24 C30 88.0 90.0
N1 N22 S19 H22 240.0 180.0
S19 N22 N1 C9 93.2 90.0
S19 N22 N1 C7 268.4 270.0
O20 S19 C24 O21 133.6 134.8
O20 S19 C24 N22 246.5 247.4
O21 S19 C24 N22 112.9 112.6
C24 S19 N22 N1 97.8 60.0
C24 S19 N22 H22 217.9 240.0
C25 C24 S19 C30 180.2 179.7
S19 C24 C25 C26 179.9 179.9
S19 C24 C25 H25 359.9 0.2
S19 C24 C30 C29 180.1 180.0
S19 C24 C30 H30 0.1 359.9
N1 N22 S19 C24 97.8 60.0
S19 N22 N1 H22 120.0 180.0
C9 N1 N22 C7 184.8 180.0
N22 N1 C9 S1 187.1 180.0
N22 N1 C9 S2 8.1 360.0
N22 N1 C7 C14 188.5 179.9
N22 N1 C7 O1 7.2 0.0
H22 N22 S19 C24 217.9 240.0
S19 N22 H22 N1 235.0 180.0
H22 N22 N1 C9 333.2 270.0
H22 N22 N1 C7 148.4 90.0
S19 C24 C25 C30 179.8 180.3
C25 C24 C30 C29 360.0 0.3
C25 C24 C30 H30 180.0 180.3
C26 C25 C24 H25 180.0 179.6
C24 C25 C26 C27 360.0 0.4
C24 C25 C26 H26 180.0 180.3
S19 C24 C30 C25 180.2 179.7
C30 C24 C25 C26 0.0 359.5
C30 C24 C25 H25 180.1 179.9
C27 C29 C30 C24 0.0 360.0
C24 C30 C29 H29 180.1 179.9
C29 C30 C24 H30 180.0 180.0
C26 C25 C24 C30 0.0 359.5
C24 C25 C26 H25 180.0 180.4
C27 C26 C25 H26 180.0 180.1
C25 C26 C27 C29 0.1 359.9
C25 C26 C27 H27 180.0 179.9
H25 C25 C24 C30 180.1 179.9
C24 C25 H25 C26 180.0 179.6
H25 C25 C26 C27 179.9 180.0
H25 C25 C26 H26 360.0 360.0
C27 C26 C25 H25 179.9 180.0
C25 C26 C27 H26 180.0 179.9
C29 C27 C26 H27 180.0 180.0
C26 C27 C29 C30 359.9 360.0
C26 C27 C29 H29 179.9 180.0
H26 C26 C25 H25 360.0 360.0
C25 C26 H26 C27 180.0 180.1
H26 C26 C27 C29 180.0 179.9
H26 C26 C27 H27 360.0 360.0
C24 C30 C29 C27 0.0 360.0
C29 C27 C26 H26 180.0 179.9
C26 C27 C29 H27 180.0 180.0
C30 C29 C27 H29 180.0 180.0
C27 C29 C30 H30 180.0 180.0
H27 C27 C26 H26 360.0 360.0
C26 C27 H27 C29 180.0 180.0
H27 C27 C29 C30 180.0 179.9
H27 C27 C29 H29 360.0 359.9
C24 C30 C29 H30 180.0 180.0
C30 C29 C27 H27 180.0 179.9
C27 C29 C30 H29 180.0 180.0
H29 C29 C27 H27 360.0 359.9
C27 C29 H29 C30 180.0 180.0
H29 C29 C30 H30 0.0 360.0
C24 C30 H30 C29 180.0 180.0
H30 C30 C29 H29 0.0 360.0
C14 C1 C2 H11 118.6 240.0
C14 C1 C2 H12 240.0 120.0
C2 C1 C14 C7 50.3 181.0
C2 C1 C14 S1 294.9 70.5
C2 C1 C14 H14 173.1 305.7
H11 C1 C2 H12 121.4 240.0
C4 C2 C1 C3 179.5 180.0
C1 C2 C4 C5 180.4 179.7
C1 C2 C4 H4 0.5 360.0
C1 C2 C3 C6 179.6 180.0
C1 C2 C3 H3 359.6 0.1
C2 C1 C14 H11 241.4 120.0
C2 C1 C14 H12 120.0 240.0
C14 C1 C2 C4 252.9 270.0
C14 C1 C2 C3 73.4 90.0
H11 C1 C14 H12 238.6 120.0
N1 C7 C14 C1 221.4 242.4
C9 S1 C14 C1 139.1 117.6
C7 C14 C1 S1 115.4 110.5
C7 C14 C1 H14 237.1 235.3
C1 C14 C7 O1 42.7 62.3
S1 C14 C1 H14 121.8 124.8
C2 C1 H11 C14 121.8 240.0
C2 C1 H11 H12 240.9 120.0
H11 C1 C2 C4 134.3 30.0
H11 C1 C2 C3 314.8 210.0
C14 C1 H11 H12 119.1 240.0
H11 C1 C14 C7 168.9 61.0
H11 C1 C14 S1 53.5 310.5
H11 C1 C14 H14 291.7 185.7
C2 C1 H12 C14 237.3 120.0
C2 C1 H12 H11 118.7 240.0
H12 C1 C2 C4 12.9 150.0
H12 C1 C2 C3 193.4 330.0
C14 C1 H12 H11 241.4 120.1
H12 C1 C14 C7 290.2 300.9
H12 C1 C14 S1 174.9 190.5
H12 C1 C14 H14 53.1 65.7
C4 C2 C1 C14 252.9 270.0
C4 C2 C1 H11 134.3 30.0
C4 C2 C1 H12 12.9 150.0
C1 C2 C4 C3 180.5 180.0
C4 C2 C3 C6 0.1 360.0
C4 C2 C3 H3 180.2 180.1
C5 C4 C2 H4 180.0 179.7
C2 C4 C5 C8 0.1 0.7
C2 C4 C5 H5 180.0 180.0
C3 C2 C1 C14 73.4 90.0
C3 C2 C1 H11 314.8 210.0
C3 C2 C1 H12 193.4 330.0
C1 C2 C3 C4 179.5 180.0
C3 C2 C4 C5 359.9 359.7
C3 C2 C4 H4 179.9 180.0
C8 C6 C3 C2 359.9 0.0
C2 C3 C6 H6 179.9 180.0
C6 C3 C2 H3 180.0 179.9
C5 C4 C2 C3 359.9 359.7
C2 C4 C5 H4 180.0 180.3
C8 C5 C4 H5 180.0 180.6
C4 C5 C8 C6 360.0 359.3
C4 C5 C8 BR1 180.0 179.7
H4 C4 C2 C3 179.9 180.0
C2 C4 H4 C5 180.0 179.7
H4 C4 C5 C8 180.0 180.3
H4 C4 C5 H5 360.0 359.7
C8 C5 C4 H4 180.0 180.3
C4 C5 C8 H5 180.0 179.4
C5 C8 C6 C3 0.1 0.3
C5 C8 C6 H6 180.1 180.3
C6 C8 C5 BR1 180.0 179.7
H5 C5 C4 H4 360.0 359.7
C4 C5 H5 C8 180.0 180.6
H5 C5 C8 C6 180.0 180.0
H5 C5 C8 BR1 360.0 0.3
C2 C3 C6 C8 359.9 0.0
C6 C8 C5 H5 180.0 180.0
C5 C8 C6 BR1 180.0 180.3
C3 C6 C8 H6 180.0 180.0
C8 C6 C3 H3 179.8 179.9
C2 C3 C6 H3 180.0 180.1
C8 C6 C3 H6 180.0 180.0
C3 C6 C8 BR1 180.1 180.0
C8 C6 H6 C3 180.0 180.0
H6 C6 C8 BR1 0.1 360.0
H6 C6 C3 H3 359.9 359.9
BR1 C8 C5 H5 360.0 0.3
C5 C8 BR1 C6 180.0 179.7
BR1 C8 C6 C3 180.1 180.0
BR1 C8 C6 H6 0.1 360.0
C9 N1 N22 H22 333.2 270.0
N22 N1 C9 C7 175.8 180.0
C9 N1 C7 C14 3.9 359.9
C9 N1 C7 O1 182.6 180.0
S1 C9 N1 S2 179.0 180.1
N1 C9 S1 C14 341.5 360.0
C7 N1 N22 H22 148.4 90.0
N22 N1 C7 C9 184.6 180.0
C1 C14 C7 N1 221.4 242.4
C7 N1 C9 S1 11.4 0.0
C7 N1 C9 S2 192.3 180.0
N1 C7 C14 S1 343.5 0.0
N1 C7 C14 H14 105.1 117.7
C14 C7 N1 O1 181.3 179.9
C1 C14 S1 C9 139.1 117.6
S1 C9 N1 C7 11.4 0.0
N1 C9 S1 S2 180.9 179.9
C7 C14 S1 C9 18.2 360.0
C9 S1 C14 H14 255.4 242.4
S2 C9 N1 C7 192.3 180.0
N1 C9 S2 S1 178.9 180.1
S2 C9 S1 C14 160.6 180.1
C7 C14 C1 H11 168.9 61.0
C7 C14 C1 H12 290.2 300.9
C1 C14 C7 S1 237.9 242.3
C1 C14 C7 H14 116.3 124.7
N1 C7 C14 O1 178.6 180.1
C9 S1 C14 C7 18.2 360.0
S1 C14 C7 H14 238.4 242.4
S1 C14 C1 H11 53.5 310.5
S1 C14 C1 H12 174.9 190.5
C1 C14 S1 C7 120.9 117.7
C1 C14 S1 H14 243.7 235.3
C14 S1 C9 S2 160.6 180.1
C7 C14 S1 H14 122.8 117.6
S1 C14 C7 O1 164.8 180.0
H14 C14 C1 H11 291.7 185.7
H14 C14 C1 H12 53.1 65.7
C1 C14 H14 C7 238.6 235.2
C1 C14 H14 S1 122.6 124.8
C7 C14 H14 S1 244.1 249.5
H14 C14 C7 O1 286.5 297.6
N1 C7 O1 C14 181.4 179.9
O1 C7 C14 S1 164.8 180.0
O1 C7 C14 H14 286.5 297.6
C2 C3 H3 C6 180.0 179.9
H3 C3 C6 H6 359.9 359.9