PDB Chemical Component 5GW

Ideal Model

Chemical Description

Name 5-phenyluridine 5'-(trihydrogen diphosphate)
Formula C15 H18 N2 O12 P2
Formal charge 0
Molecular weight 480.257 g/mol
Component type NON-POLYMER

Chemical features

Atom count 49
Chiral atom count 4
Chiral atoms C1' C2' C3' C4'
Bond count 51
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) 5-phenyluridine 5'-(trihydrogen diphosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)-5-phenyl-pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(O)=O)N2C=C(C(=O)NC2=O)c3ccccc3
SMILES (CACTVS) O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(O)=O)N2C=C(C(=O)NC2=O)c3ccccc3
Stereo SMILES (OpenEye) c1ccc(cc1)C2=CN(C(=O)NC2=O)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)O)O)O
InChI descriptor InChI=1S/C15H18N2O12P2/c18-11-10(7-27-31(25,26)29-30(22,23)24)28-14(12(11)19)17-6-9(13(20)16-15(17)21)8-4-2-1-3-5-8/h1-6,10-12,14,18-19H,7H2,(H,25,26)(H,16,20,21)(H2,22,23,24)/t10-,11-,12-,14-/m1/s1
InChIKey descriptor YEGUYIFHFHBENO-HKUMRIAESA-N

Status Information

Last modified 2013-01-18
Created 2012-01-04
Release status REL
Model PDB code 3V0M
Processing site RCSB