PDB Chemical Component 5ES

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5ES

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O01	C02	1.418	1.359
C02	C05	1.323	1.389
C02	C03	1.354	1.389
C05	C06	1.379	1.378
C03	C04	1.419	1.379
C06	C07	1.395	1.396
C04	C07	1.288	1.396
C07	C08	1.568	1.479
F27	C26	1.308	1.351
C08	C09	1.510	1.480
C08	C16	1.356	1.356
C09	C10	1.398	1.396
C09	C15	1.442	1.396
C10	C11	1.458	1.379
C15	C14	1.378	1.379
C11	C12	1.361	1.389
C14	C12	1.474	1.388
C12	O13	1.347	1.359
C16	C17	1.551	1.471
C26	C25	1.351	1.385
C26	C28	1.460	1.385
C25	C24	1.358	1.382
C28	C29	1.349	1.381
C17	C30	1.447	1.398
C17	C18	1.405	1.399
C24	C23	1.441	1.388
C30	C21	1.409	1.387
C29	C23	1.374	1.388
C23	N22	1.449	1.399
C18	C19	1.396	1.379
C21	N22	1.387	1.397
C21	C20	1.390	1.391
C19	C20	1.441	1.383
O01	H1	0.950	0.967
C03	H2	1.080	1.081
C04	H3	1.080	1.080
C05	H4	1.080	1.080
C06	H5	1.080	1.080
C10	H6	1.080	1.080
C11	H7	1.080	1.079
O13	H8	0.950	0.967
C14	H9	1.080	1.080
C15	H10	1.080	1.080
C16	H11	1.080	1.080
C18	H12	1.080	1.080
C19	H13	1.080	1.080
C20	H14	1.080	1.080
N22	H15	1.000	0.970
C24	H16	1.080	1.081
C25	H17	1.080	1.080
C28	H18	1.080	1.081
C29	H19	1.080	1.080
C30	H20	1.080	1.079

Bond Angles for 5ES

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O01	C02	C05	119.8	119.9
O01	C02	C03	119.9	119.9
C02	O01	H1	109.5	114.0
C03	C02	C05	120.2	120.1
C02	C05	C06	120.1	120.1
C02	C05	H4	120.0	119.9
C02	C03	C04	120.0	120.1
C02	C03	H2	120.0	119.9
C05	C06	C07	119.6	119.9
C06	C05	H4	119.9	120.0
C05	C06	H5	120.2	120.0
C03	C04	C07	119.5	119.9
C04	C03	H2	120.0	119.9
C03	C04	H3	120.2	120.0
C04	C07	C06	120.5	119.8
C06	C07	C08	119.9	120.1
C07	C06	H5	120.2	120.1
C04	C07	C08	119.6	120.1
C07	C04	H3	120.2	120.1
C07	C08	C09	118.4	120.0
C07	C08	C16	117.0	120.0
F27	C26	C28	120.0	120.0
C09	C08	C16	124.6	120.0
C08	C09	C10	120.3	120.1
C08	C09	C15	120.5	120.1
C08	C16	C17	125.1	120.0
C08	C16	H11	117.5	120.0
C10	C09	C15	119.3	119.9
C09	C10	C11	120.2	119.9
C09	C10	H6	119.9	120.1
C09	C15	C14	120.5	119.9
C09	C15	H10	119.8	120.0
C10	C11	C12	120.3	120.0
C11	C10	H6	119.9	120.0
C10	C11	H7	119.8	120.0
C15	C14	H9	119.9	119.9
C11	C12	O13	120.0	119.8
C12	C11	H7	119.8	120.0
C12	O13	H8	109.5	114.0
C16	C17	C30	119.0	120.1
C16	C17	C18	121.8	120.1
C17	C16	H11	117.5	120.0
C26	C25	H17	120.0	120.0
C26	C28	C29	120.0	120.0
C26	C28	H18	120.0	119.9
C25	C24	H16	119.9	120.0
C29	C28	H18	120.0	120.0
C28	C29	H19	120.2	120.0
C18	C17	C30	119.2	119.7
C17	C30	C21	120.1	119.7
C17	C30	H20	120.0	120.1
C17	C18	C19	120.5	120.0
C17	C18	H12	119.7	120.0
C23	N22	H15	119.9	120.0
C18	C19	C20	119.9	120.3
C19	C18	H12	119.7	120.0
C18	C19	H13	120.1	119.9
C21	N22	H15	119.9	120.0
C21	C20	H14	119.8	119.8
C20	C19	H13	120.1	119.9
C19	C20	H14	119.8	119.9

Torsion Angles for 5ES

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C03	C02	O01	C05	179.8	180.4
O01	C02	C05	C06	179.9	180.0
O01	C02	C05	H4	359.9	0.0
O01	C02	C03	C04	180.0	180.0
O01	C02	C03	H2	0.0	359.9
O01	C02	C05	C03	179.8	180.4
C05	C02	O01	H1	180.0	90.0
C05	C02	C03	C04	359.8	0.4
C05	C02	C03	H2	179.8	180.3
C02	C05	C06	C07	359.8	360.0
C06	C05	C02	H4	180.0	180.0
C02	C05	C06	H5	179.8	180.0
O01	C02	C03	C05	180.2	179.6
C03	C02	O01	H1	359.8	270.3
C03	C02	C05	C06	0.1	359.7
C03	C02	C05	H4	180.1	179.7
C02	C03	C04	C07	0.2	359.9
C04	C03	C02	H2	180.0	180.1
C02	C03	C04	H3	180.2	179.9
C02	C05	C06	H4	180.0	180.0
C04	C07	C06	C05	0.2	0.3
C05	C06	C07	C08	179.2	180.1
C07	C06	C05	H5	180.0	180.0
C04	C03	C02	C05	359.8	0.4
C02	C03	C04	H2	180.0	179.9
C03	C04	C07	C06	359.7	359.7
C03	C04	C07	C08	180.7	180.0
C07	C04	C03	H3	180.0	180.0
C07	C06	C05	H4	179.8	180.0
C05	C06	C07	H5	180.0	180.0
C04	C07	C06	C08	181.0	180.3
C06	C07	C04	H3	179.8	179.7
C06	C07	C08	C09	25.7	65.2
C06	C07	C08	C16	207.3	245.3
C05	C06	C07	C04	0.2	0.3
C07	C04	C03	H2	180.3	180.0
C03	C04	C07	H3	180.0	180.0
C06	C07	C04	C08	179.0	179.7
C04	C07	C06	H5	180.2	180.3
C04	C07	C08	C09	204.6	245.0
C04	C07	C08	C16	26.3	65.0
C04	C07	C08	C06	179.0	179.7
C08	C07	C06	H5	359.2	0.1
C08	C07	C04	H3	0.8	360.0
C09	C08	C07	C16	178.4	180.0
C07	C08	C09	C10	245.4	244.0
C07	C08	C09	C15	64.0	63.7
C07	C08	C16	C17	179.3	187.1
C07	C08	C16	H11	359.4	7.2
F27	C26	C25	H17	0.0	0.1
F27	C26	C28	C29	180.0	179.7
F27	C26	C28	H18	0.1	359.9
C07	C08	C09	C16	181.8	180.0
C09	C08	C16	C17	1.1	7.2
C09	C08	C16	H11	181.1	187.2
C10	C09	C08	C15	181.3	180.3
C08	C09	C10	C11	179.4	180.0
C08	C09	C10	H6	359.4	360.0
C08	C09	C15	C14	180.8	179.8
C08	C09	C15	H10	0.8	0.1
C07	C08	C16	C09	178.2	180.0
C16	C08	C09	C10	63.6	64.0
C16	C08	C09	C15	242.3	243.7
C08	C16	C17	C30	223.6	212.3
C08	C16	C17	C18	44.6	32.5
C17	C16	C08	H11	180.0	180.0
C10	C09	C08	C16	63.6	64.0
C08	C09	C10	C15	178.7	179.7
C10	C09	C15	C14	359.5	359.5
C10	C09	C15	H10	179.5	179.8
C09	C10	C11	C12	359.5	0.0
C11	C10	C09	H6	180.0	180.0
C09	C10	C11	H7	179.5	180.0
C15	C09	C08	C16	242.3	243.7
C08	C09	C15	C10	181.3	180.3
C15	C09	C10	C11	0.7	0.2
C15	C09	C10	H6	180.7	180.2
C09	C15	C14	H9	180.1	180.3
C11	C10	C09	C15	0.7	0.2
C09	C10	C11	H6	180.0	180.0
C10	C11	C12	O13	180.1	180.0
C12	C11	C10	H7	180.0	180.0
C09	C15	C14	H10	180.0	180.3
C12	C11	C10	H6	179.5	180.0
C10	C11	C12	H7	180.0	180.0
C11	C12	O13	H8	180.0	90.1
C09	C15	C14	C12	0.1	0.5
C14	C12	C11	H7	180.1	180.0
C14	C12	O13	H8	360.0	270.1
O13	C12	C11	H7	0.0	0.0
C08	C16	C17	H11	180.0	180.0
C18	C17	C16	C30	181.0	180.2
C16	C17	C30	C21	180.3	179.7
C16	C17	C30	H20	0.2	359.9
C16	C17	C18	C19	179.9	180.0
C16	C17	C18	H12	359.9	0.0
C26	C25	C24	H16	179.9	180.0
C28	C26	C25	H17	180.0	180.0
C29	C28	C26	H18	180.0	179.8
C26	C28	C29	H19	180.1	180.0
C26	C28	C29	H18	180.0	180.2
C16	C17	C30	C18	181.0	180.2
C30	C17	C16	H11	43.5	32.3
C30	C17	C18	C19	0.9	0.2
C30	C17	C18	H12	180.9	180.2
C16	C17	C18	C30	179.0	179.8
C18	C17	C16	H11	224.5	212.5
C18	C17	C30	C21	359.3	359.5
C18	C17	C30	H20	179.3	179.7
C17	C18	C19	C20	359.3	0.0
C19	C18	C17	H12	180.0	180.0
C17	C18	C19	H13	179.4	180.0
C24	C23	N22	H15	265.9	213.1
C17	C30	C21	H20	180.0	180.2
C30	C21	N22	H15	201.5	205.5
C30	C21	C20	H14	180.0	179.8
C29	C23	N22	H15	86.0	32.8
C21	N22	C23	H15	180.0	180.0
C19	C18	C17	C30	0.9	0.2
C17	C18	C19	H12	180.0	180.0
C20	C19	C18	H13	180.0	180.0
C18	C19	C20	H14	180.2	179.9
C17	C30	C21	N22	180.3	180.2
C23	N22	C21	H15	180.0	180.0
N22	C21	C20	H14	360.0	0.1
C17	C30	C21	C20	0.3	0.5
C21	C20	C19	H13	180.2	180.0
C19	C20	C21	H14	180.0	179.9
C20	C19	C18	H12	179.4	180.0
C18	C19	C20	H13	180.0	180.0
C21	C20	C19	H14	180.0	180.1
H1	O01	C02	C05	180.0	90.0
H1	O01	C02	C03	359.8	270.3
H2	C03	C02	C05	179.8	180.3
C02	C03	H2	C04	180.0	180.1
H2	C03	C04	C07	180.3	180.0
H2	C03	C04	H3	0.2	0.1
C03	C04	H3	C07	180.0	180.0
H3	C04	C03	H2	0.2	0.1
H3	C04	C07	C06	179.8	179.7
H3	C04	C07	C08	0.8	360.0
C02	C05	H4	C06	180.0	180.0
H4	C05	C06	C07	179.8	180.0
H4	C05	C06	H5	359.8	360.0
C05	C06	H5	C07	180.0	180.0
H5	C06	C05	H4	359.8	360.0
H5	C06	C07	C08	359.2	0.1
H6	C10	C09	C15	180.7	180.2
C09	C10	H6	C11	180.0	180.0
H6	C10	C11	C12	179.5	180.0
H6	C10	C11	H7	359.5	0.0
C10	C11	H7	C12	180.0	180.0
H7	C11	C10	H6	359.5	0.0
H7	C11	C12	O13	0.0	0.0
C09	C15	H10	C14	180.0	179.7
H10	C15	C14	H9	0.2	360.0
C08	C16	H11	C17	180.0	180.0
H11	C16	C17	C30	43.5	32.3
H11	C16	C17	C18	224.5	212.5
H12	C18	C17	C30	180.9	180.2
C17	C18	H12	C19	180.0	180.0
H12	C18	C19	C20	179.4	180.0
H12	C18	C19	H13	359.4	360.0
C18	C19	H13	C20	180.0	180.0
H13	C19	C18	H12	359.4	360.0
H13	C19	C20	H14	0.2	360.0
H14	C20	C19	H13	0.2	360.0
H17	C25	C24	H16	359.9	0.0
C26	C28	H18	C29	180.0	179.8
H18	C28	C29	H19	0.0	359.8
H19	C29	C28	H18	0.0	359.8
C17	C30	H20	C21	180.0	179.8