PDB Chemical Component 5EE

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5EE

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
S19 O20 1.433 1.421
S19 O21 1.434 1.420
S19 N22 1.744 1.656
S19 C24 1.699 1.762
N22 N1 1.499 1.401
N22 H22 1.000 0.970
C24 S3 1.706 1.785
C24 C30 1.445 1.356
S3 C27 1.707 1.785
C27 C29 1.448 1.355
C27 H27 1.080 1.080
C29 C30 1.442 1.382
C29 H29 1.080 1.080
C30 H30 1.080 1.080
C1 C2 1.524 1.508
C1 C14 1.538 1.531
C1 H11 1.100 1.089
C1 H12 1.100 1.090
C2 C4 1.400 1.382
C2 C3 1.401 1.382
C4 C5 1.399 1.382
C4 H4 1.080 1.080
C5 C8 1.401 1.383
C5 H5 1.080 1.080
C6 C8 1.456 1.385
C6 C3 1.401 1.384
C6 CL2 1.742 1.736
C8 CL1 1.759 1.736
N1 C9 1.339 1.345
N1 C7 1.339 1.324
C9 S1 1.757 1.788
C9 S2 1.681 1.712
C14 C7 1.521 1.522
C14 S1 1.823 1.837
C14 H14 1.100 1.089
C7 O1 1.236 1.213
C3 H3 1.080 1.080

Bond Angles for 5EE

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O20 S19 O21 120.0 125.4
O20 S19 N22 106.2 105.7
O20 S19 C24 109.1 105.7
O21 S19 N22 105.0 105.8
O21 S19 C24 109.1 105.8
N22 S19 C24 106.6 107.4
S19 N22 N1 113.8 120.0
S19 N22 H22 108.0 120.0
S19 C24 S3 127.7 129.0
S19 C24 C30 119.8 129.1
N1 N22 H22 108.0 120.0
N22 N1 C9 118.8 118.3
N22 N1 C7 126.1 118.3
S3 C24 C30 112.6 101.9
C24 S3 C27 93.2 98.1
C24 C30 C29 110.8 119.0
C24 C30 H30 124.6 120.5
S3 C27 C29 112.1 102.0
S3 C27 H27 123.9 129.0
C29 C27 H27 123.9 129.0
C27 C29 C30 111.3 119.0
C27 C29 H29 124.4 120.6
C30 C29 H29 124.4 120.4
C29 C30 H30 124.6 120.5
C2 C1 C14 118.4 109.4
C2 C1 H11 104.6 109.5
C2 C1 H12 106.6 109.5
C1 C2 C4 118.1 120.0
C1 C2 C3 121.2 120.0
C14 C1 H11 104.6 109.5
C14 C1 H12 106.6 109.4
C1 C14 C7 112.7 111.3
C1 C14 S1 110.6 111.3
C1 C14 H14 104.1 111.1
H11 C1 H12 116.7 109.5
C4 C2 C3 120.7 120.1
C2 C4 C5 121.1 120.0
C2 C4 H4 119.5 120.0
C2 C3 C6 119.2 120.0
C2 C3 H3 120.4 120.0
C5 C4 H4 119.4 120.0
C4 C5 C8 119.9 120.0
C4 C5 H5 120.1 120.0
C8 C5 H5 120.0 120.0
C5 C8 C6 118.7 120.0
C5 C8 CL1 120.4 120.0
C8 C6 C3 120.4 119.9
C8 C6 CL2 120.2 120.0
C6 C8 CL1 120.9 120.0
C3 C6 CL2 119.4 120.0
C6 C3 H3 120.4 120.0
C9 N1 C7 115.1 123.4
N1 C9 S1 110.1 103.9
N1 C9 S2 126.7 128.1
N1 C7 C14 116.2 115.3
N1 C7 O1 121.5 122.3
S1 C9 S2 123.1 128.0
C9 S1 C14 92.3 97.5
C7 C14 S1 100.6 99.9
C7 C14 H14 113.6 111.4
C14 C7 O1 122.3 122.3
S1 C14 H14 115.6 111.4

Torsion Angles for 5EE

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O21 S19 O20 N22 241.3 236.9
O21 S19 O20 C24 126.8 123.2
N22 S19 O20 C24 245.5 246.3
O20 S19 N22 N1 236.9 172.6
O20 S19 N22 H22 356.9 352.6
O20 S19 C24 S3 153.1 157.4
O20 S19 C24 C30 332.9 337.2
O20 S19 O21 N22 119.3 123.1
O20 S19 O21 C24 233.2 236.9
N22 S19 O21 C24 113.9 113.7
O21 S19 N22 N1 5.0 307.4
O21 S19 N22 H22 125.0 127.4
O21 S19 C24 S3 20.3 22.6
O21 S19 C24 C30 200.1 202.3
O20 S19 N22 O21 231.9 225.2
O20 S19 N22 C24 116.3 112.5
O21 S19 N22 C24 244.4 247.4
N22 S19 C24 S3 267.4 270.0
N22 S19 C24 C30 87.2 89.7
N1 N22 S19 H22 240.0 180.0
S19 N22 N1 C9 97.4 90.0
S19 N22 N1 C7 279.2 270.0
O20 S19 C24 O21 132.8 134.8
O20 S19 C24 N22 245.7 247.4
O21 S19 C24 N22 112.9 112.6
C24 S19 N22 N1 120.7 60.0
C24 S19 N22 H22 240.6 240.1
S3 C24 S19 C30 180.2 180.3
S19 C24 S3 C27 179.8 180.0
S19 C24 C30 C29 180.2 179.8
S19 C24 C30 H30 0.2 0.3
N1 N22 S19 C24 120.7 60.0
S19 N22 N1 H22 120.0 180.0
C9 N1 N22 C7 178.2 180.0
N22 N1 C9 S1 197.5 180.0
N22 N1 C9 S2 20.2 360.0
N22 N1 C7 C14 179.4 180.0
N22 N1 C7 O1 355.7 360.0
H22 N22 S19 C24 240.6 240.1
S19 N22 H22 N1 236.5 180.0
H22 N22 N1 C9 337.4 269.9
H22 N22 N1 C7 159.2 89.9
S19 C24 S3 C30 179.8 179.8
S3 C24 C30 C29 360.0 359.6
S3 C24 C30 H30 180.0 180.0
C24 S3 C27 C29 0.0 0.0
C24 S3 C27 H27 180.1 180.0
S19 C24 C30 S3 180.2 180.2
C30 C24 S3 C27 360.0 0.2
C27 C29 C30 C24 0.1 0.5
C24 C30 C29 H29 180.0 180.2
C29 C30 C24 H30 180.0 179.5
C27 S3 C24 C30 360.0 0.2
C29 C27 S3 H27 180.0 180.1
S3 C27 C29 C30 359.9 359.7
S3 C27 C29 H29 179.9 180.0
C24 C30 C29 C27 0.1 0.5
S3 C27 C29 H27 180.0 179.9
C30 C29 C27 H29 180.0 179.7
C27 C29 C30 H30 180.1 180.0
S3 C27 H27 C29 180.0 180.1
H27 C27 C29 C30 179.9 179.8
H27 C27 C29 H29 359.9 0.0
C24 C30 C29 H30 180.0 180.5
C30 C29 C27 H27 179.9 179.8
C27 C29 C30 H29 180.0 180.3
H29 C29 C27 H27 359.9 0.0
C27 C29 H29 C30 180.0 179.7
H29 C29 C30 H30 0.0 359.8
C24 C30 H30 C29 180.0 179.5
H30 C30 C29 H29 0.0 359.8
C14 C1 C2 H11 115.8 240.0
C14 C1 C2 H12 240.0 119.9
C2 C1 C14 C7 48.0 181.0
C2 C1 C14 S1 296.3 70.4
C2 C1 C14 H14 171.5 305.7
H11 C1 C2 H12 124.2 239.9
C4 C2 C1 C3 180.1 180.1
C1 C2 C4 C5 179.7 180.0
C1 C2 C4 H4 359.7 360.0
C1 C2 C3 C6 180.4 179.7
C1 C2 C3 H3 0.5 0.1
C2 C1 C14 H11 244.2 120.0
C2 C1 C14 H12 120.0 240.0
C14 C1 C2 C4 90.0 90.0
C14 C1 C2 C3 269.9 270.0
H11 C1 C14 H12 235.8 120.1
N1 C7 C14 C1 226.1 242.4
C9 S1 C14 C1 139.4 117.6
C7 C14 C1 S1 111.7 110.5
C7 C14 C1 H14 236.5 235.3
C1 C14 C7 O1 49.8 62.4
S1 C14 C1 H14 124.8 124.8
C2 C1 H11 C14 125.1 240.1
C2 C1 H11 H12 242.5 120.1
H11 C1 C2 C4 334.2 210.0
H11 C1 C2 C3 154.1 29.9
C14 C1 H11 H12 117.4 240.0
H11 C1 C14 C7 163.8 61.0
H11 C1 C14 S1 52.1 310.5
H11 C1 C14 H14 287.3 185.7
C2 C1 H12 C14 232.7 119.9
C2 C1 H12 H11 116.4 239.9
H12 C1 C2 C4 210.0 330.1
H12 C1 C2 C3 29.9 150.0
C14 C1 H12 H11 243.7 120.0
H12 C1 C14 C7 288.0 300.9
H12 C1 C14 S1 176.3 190.4
H12 C1 C14 H14 51.5 65.6
C4 C2 C1 C14 90.0 90.0
C4 C2 C1 H11 334.2 210.0
C4 C2 C1 H12 210.0 330.1
C1 C2 C4 C3 179.9 179.9
C4 C2 C3 C6 0.3 359.7
C4 C2 C3 H3 180.3 180.0
C5 C4 C2 H4 180.0 180.0
C2 C4 C5 C8 360.0 0.0
C2 C4 C5 H5 180.0 180.0
C3 C2 C1 C14 269.9 270.0
C3 C2 C1 H11 154.1 29.9
C3 C2 C1 H12 29.9 150.0
C1 C2 C3 C4 180.1 180.1
C3 C2 C4 C5 359.8 0.0
C3 C2 C4 H4 179.8 180.0
C8 C6 C3 C2 359.8 0.6
C2 C3 C6 CL2 179.6 180.0
C6 C3 C2 H3 180.0 179.6
C5 C4 C2 C3 359.8 0.0
C2 C4 C5 H4 180.0 180.0
C8 C5 C4 H5 180.0 180.0
C4 C5 C8 C6 0.2 0.3
C4 C5 C8 CL1 180.3 180.0
H4 C4 C2 C3 179.8 180.0
C2 C4 H4 C5 180.0 180.0
H4 C4 C5 C8 180.0 180.0
H4 C4 C5 H5 360.0 360.0
C8 C5 C4 H4 180.0 180.0
C4 C5 C8 H5 180.0 180.0
C5 C8 C6 C3 359.9 359.4
C5 C8 C6 CL2 180.1 180.0
C6 C8 C5 CL1 179.8 180.3
H5 C5 C4 H4 360.0 360.0
C4 C5 H5 C8 180.0 180.0
H5 C5 C8 C6 180.2 180.3
H5 C5 C8 CL1 0.3 0.1
C2 C3 C6 C8 359.8 0.6
C6 C8 C5 H5 180.2 180.3
C5 C8 C6 CL1 180.2 179.7
C3 C6 C8 CL2 179.8 179.4
C8 C6 C3 H3 179.8 180.3
C2 C3 C6 H3 180.0 180.4
C8 C6 C3 CL2 180.2 180.6
C3 C6 C8 CL1 179.8 179.7
C8 C6 CL2 C3 179.8 179.4
CL2 C6 C8 CL1 360.0 0.2
CL2 C6 C3 H3 359.6 359.7
CL1 C8 C5 H5 0.3 0.1
C5 C8 CL1 C6 179.8 180.3
CL1 C8 C6 C3 179.8 179.7
CL1 C8 C6 CL2 360.0 0.2
C9 N1 N22 H22 337.4 269.9
N22 N1 C9 C7 181.6 180.0
C9 N1 C7 C14 1.1 360.0
C9 N1 C7 O1 177.4 180.0
S1 C9 N1 S2 177.3 180.0
N1 C9 S1 C14 338.0 360.0
C7 N1 N22 H22 159.2 89.9
N22 N1 C7 C9 178.3 180.0
C1 C14 C7 N1 226.1 242.4
C7 N1 C9 S1 15.9 0.0
C7 N1 C9 S2 198.6 180.0
N1 C7 C14 S1 343.9 360.0
N1 C7 C14 H14 108.0 117.8
C14 C7 N1 O1 183.6 180.0
C1 C14 S1 C9 139.4 117.6
S1 C9 N1 C7 15.9 0.0
N1 C9 S1 S2 182.6 180.0
C7 C14 S1 C9 20.1 0.0
C9 S1 C14 H14 257.3 242.3
S2 C9 N1 C7 198.6 180.0
N1 C9 S2 S1 177.0 180.1
S2 C9 S1 C14 155.4 180.0
C7 C14 C1 H11 163.8 61.0
C7 C14 C1 H12 288.0 300.9
C1 C14 C7 S1 242.2 242.4
C1 C14 C7 H14 118.1 124.6
N1 C7 C14 O1 176.3 180.0
C9 S1 C14 C7 20.1 0.0
S1 C14 C7 H14 235.9 242.2
S1 C14 C1 H11 52.1 310.5
S1 C14 C1 H12 176.3 190.4
C1 C14 S1 C7 119.3 117.6
C1 C14 S1 H14 242.1 235.4
C14 S1 C9 S2 155.4 180.0
C7 C14 S1 H14 122.8 117.7
S1 C14 C7 O1 167.5 180.0
H14 C14 C1 H11 287.3 185.7
H14 C14 C1 H12 51.5 65.6
C1 C14 H14 C7 237.0 235.3
C1 C14 H14 S1 121.5 124.7
C7 C14 H14 S1 244.5 249.4
H14 C14 C7 O1 291.7 297.8
N1 C7 O1 C14 183.9 180.0
O1 C7 C14 S1 167.5 180.0
O1 C7 C14 H14 291.7 297.8
C2 C3 H3 C6 180.0 179.6
H3 C3 C6 CL2 359.6 359.7