PDB Chemical Component 5E6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5E6

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C20	N19	1.286	1.314
C20	C21	1.367	1.393
N22	C21	1.334	1.370
N22	N24	1.351	1.399
N19	C18	1.303	1.331
C21	C16	1.373	1.409
C30	N29	1.287	1.318
C30	C25	1.376	1.394
N24	C15	1.278	1.313
C18	C25	1.472	1.484
C18	C17	1.370	1.386
N29	C28	1.298	1.319
C16	C15	1.445	1.464
C16	C17	1.381	1.397
C25	C26	1.384	1.398
C15	C3	1.477	1.480
C28	C27	1.365	1.382
C26	C27	1.363	1.385
C3	C2	1.359	1.392
C3	N4	1.294	1.328
C2	C1	1.366	1.386
N4	C5	1.286	1.323
C1	C6	1.358	1.384
C5	C6	1.369	1.392
C5	N7	1.372	1.391
C8	C9	1.508	1.531
C8	N7	1.444	1.464
C8	C13	1.524	1.530
C9	C10	1.507	1.530
C13	C12	1.512	1.530
C10	C11	1.512	1.530
C12	C11	1.524	1.530
C12	N14	1.460	1.470
C9	H1	1.100	1.090
C9	H2	1.100	1.090
C2	H3	1.080	1.080
C10	H4	1.100	1.089
C10	H5	1.100	1.090
C6	H6	1.080	1.080
C1	H7	1.080	1.080
N7	H8	1.000	0.970
C8	H9	1.100	1.090
C11	H10	1.100	1.091
C11	H11	1.100	1.090
C12	H12	1.101	1.090
C13	H13	1.100	1.090
C13	H14	1.100	1.090
N14	H15	1.000	1.009
N14	H16	1.000	1.009
C17	H18	1.080	1.080
C20	H19	1.080	1.079
N22	H23	1.000	0.971
C26	H20	1.080	1.080
C27	H21	1.080	1.081
C28	H22	1.080	1.080
C30	H24	1.080	1.079

Bond Angles for 5E6

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C21	C20	H19	119.0	119.8
N24	N22	H23	125.0	125.3
N19	C18	C25	118.3	119.5
C18	C25	C26	122.4	120.5
C18	C17	H18	120.3	120.7
N29	C28	H22	119.4	119.4
C16	C17	H18	120.2	120.7
C25	C26	C27	118.7	118.3
C25	C26	H20	120.7	120.9
C28	C27	H21	120.6	120.3
C27	C26	H20	120.6	120.8
C26	C27	H21	120.6	120.4
C3	C2	H3	120.1	120.4
C3	N4	C5	123.6	121.5
C2	C1	C6	119.0	118.6
C1	C2	H3	120.1	120.4
C2	C1	H7	120.5	120.7
N4	C5	N7	119.2	119.7
C1	C6	H6	120.9	120.3
C5	C6	H6	120.9	120.3
C5	N7	H8	106.9	120.0
C8	C9	H1	109.5	109.4
C8	C9	H2	109.5	109.4
C8	N7	H8	107.0	120.0
C8	C13	C12	114.1	109.5
C13	C8	H9	105.6	109.5
C8	C13	H13	108.3	109.5
C8	C13	H14	108.3	109.5
C9	C10	C11	107.2	109.5
C10	C9	H1	109.6	109.5
C10	C9	H2	109.6	109.5
C9	C10	H4	110.0	109.4
C9	C10	H5	110.0	109.5
C13	C12	N14	110.0	109.5
C13	C12	H12	108.3	109.5
C11	C10	H4	110.0	109.5
C11	C10	H5	110.0	109.5
C10	C11	H10	108.7	109.5
C10	C11	H11	108.7	109.5
C12	C11	H10	108.7	109.4
C12	C11	H11	108.7	109.5
N14	C12	H12	108.9	109.4
C12	N14	H15	109.5	111.0
C12	N14	H16	109.4	111.0
H1	C9	H2	109.5	109.5
H4	C10	H5	109.5	109.5
H10	C11	H11	109.4	109.5
H13	C13	H14	109.5	109.4
H15	N14	H16	109.5	111.0

Torsion Angles for 5E6

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C20	N19	C18	C25	180.9	180.1
N22	C21	C20	H19	0.6	360.0
N19	C18	C25	C26	195.1	360.0
N19	C18	C17	H18	179.1	180.0
C21	C16	C17	H18	180.3	180.0
C30	N29	C28	H22	179.2	179.7
C30	C25	C26	H20	180.7	180.2
C25	C18	C17	H18	360.0	360.0
C18	C25	C26	C27	179.7	180.0
C18	C25	C26	H20	359.7	360.0
C16	C17	C18	H18	180.0	180.0
N29	C28	C27	H21	180.6	180.0
C18	C17	C16	H18	180.0	180.0
C27	C26	C25	H20	180.0	180.0
C25	C26	C27	H21	179.4	180.0
C15	C3	C2	H3	359.6	0.3
C28	C27	C26	H20	179.4	180.0
C26	C27	C28	H21	180.0	180.0
C25	C26	C27	H20	180.0	180.0
C28	C27	C26	H21	180.0	180.0
C1	C2	C3	H3	180.0	179.8
C3	C2	C1	H7	178.6	180.3
N4	C3	C2	H3	182.0	180.2
C3	N4	C5	N7	178.7	180.0
C3	C2	C1	H3	180.0	180.2
C2	C1	C6	H6	179.8	180.0
N4	C5	C6	H6	181.2	180.0
N4	C5	N7	H8	122.9	359.9
C6	C1	C2	H3	178.6	180.0
C2	C1	C6	H7	180.0	180.0
C5	C6	C1	H6	180.0	179.4
C1	C6	C5	H6	180.0	180.6
N7	C5	C6	H6	1.9	359.7
C8	N7	C5	H8	238.6	180.1
C8	C9	C10	C11	63.6	60.0
C10	C9	C8	H1	240.0	120.0
C10	C9	C8	H2	120.0	240.0
C8	C9	C10	H4	183.2	180.0
C8	C9	C10	H5	303.9	300.0
H1	C9	C8	H2	239.9	120.0
C5	N7	C8	H8	121.4	179.9
N7	C8	C9	H1	191.9	300.0
N7	C8	C9	H2	312.0	180.0
C13	C8	C9	H1	62.0	180.0
C13	C8	C9	H2	182.1	60.0
C13	C8	N7	H8	106.4	25.1
C8	C13	C12	N14	190.5	180.0
C8	C13	C12	H12	71.6	60.1
H13	C13	C8	H14	241.4	240.1
C8	C9	C10	H1	119.9	240.1
C8	C9	C10	H2	240.0	120.0
C11	C10	C9	H4	240.3	240.0
C11	C10	C9	H5	119.6	120.0
C9	C10	C11	H10	57.4	60.0
C9	C10	C11	H11	176.4	180.0
H1	C9	C10	H2	120.1	239.9
H4	C10	C9	H5	239.3	240.0
C12	C13	C8	H9	164.6	180.0
C8	C13	C12	H13	120.7	120.0
C8	C13	C12	H14	239.3	240.0
C13	C12	C11	H10	293.5	300.0
C13	C12	C11	H11	174.4	180.0
N14	C12	C13	H12	118.9	119.9
C13	C12	N14	H15	180.0	180.0
C13	C12	N14	H16	300.0	304.0
C11	C10	C9	H1	303.6	179.9
C11	C10	C9	H2	183.5	300.0
C9	C10	C11	H4	119.7	120.0
C9	C10	C11	H5	240.4	240.0
C12	C11	C10	H10	239.5	240.0
C12	C11	C10	H11	120.5	120.0
H4	C10	C11	H5	120.7	120.0
H10	C11	C10	H11	241.0	240.0
C8	C13	C12	C11	313.6	300.0
C12	C11	C10	H4	177.3	180.0
C12	C11	C10	H5	56.6	60.0
C10	C11	C12	H10	120.5	120.0
C10	C11	C12	H11	239.5	240.0
H10	C11	C12	H11	119.0	120.0
C13	C12	N14	H12	241.5	240.0
N14	C12	C11	H10	55.7	60.0
N14	C12	C11	H11	296.7	300.0
H15	N14	C12	H16	240.0	236.0
C8	C9	H1	H2	120.1	240.0
H1	C9	C10	C11	303.6	179.9
C10	C9	H1	H2	239.8	120.1
H1	C9	C10	H4	63.3	299.9
H1	C9	C10	H5	184.0	59.9
C8	C9	H2	H1	239.9	120.0
H2	C9	C10	C11	183.5	300.0
C10	C9	H2	H1	120.2	239.9
H2	C9	C10	H4	303.2	60.0
H2	C9	C10	H5	63.9	180.0
H3	C2	C1	C6	178.6	180.0
H3	C2	C1	H7	358.6	0.0
C9	C10	H4	C11	242.0	240.0
H4	C10	C9	H1	63.3	299.9
H4	C10	C9	H2	303.2	60.0
C9	C10	H4	H5	121.0	120.0
C11	C10	H4	H5	239.0	240.0
H4	C10	C11	H10	297.8	300.0
H4	C10	C11	H11	56.8	60.0
C9	C10	H5	C11	117.9	120.0
H5	C10	C9	H1	184.0	59.9
H5	C10	C9	H2	63.9	180.0
C9	C10	H5	H4	239.0	240.0
C11	C10	H5	H4	121.1	120.0
H5	C10	C11	H10	177.1	180.0
H5	C10	C11	H11	296.1	300.0
C2	C1	H7	C6	180.0	180.0
H7	C1	C2	H3	358.6	0.0
H7	C1	C6	H6	359.8	0.0
H9	C8	C9	H1	307.5	60.0
H9	C8	C9	H2	67.5	300.0
H9	C8	N7	H8	222.7	145.1
H9	C8	C13	C12	164.6	180.0
H9	C8	C13	H13	285.2	300.0
H9	C8	C13	H14	43.9	60.0
H10	C11	C10	H4	297.8	300.0
H10	C11	C10	H5	177.1	180.0
C10	C11	H10	H11	118.5	120.0
C12	C11	H10	H11	241.4	240.0
H11	C11	C10	H4	56.8	60.0
H11	C11	C10	H5	296.1	300.0
C10	C11	H11	H10	241.5	240.0
C12	C11	H11	H10	118.6	120.0
C13	C12	H12	N14	119.6	119.9
H12	C12	C11	H10	175.4	180.0
H12	C12	C11	H11	56.4	60.0
H12	C12	N14	H15	298.5	300.0
H12	C12	N14	H16	58.5	63.9
C8	C13	H13	C12	235.8	240.0
H13	C13	C8	H9	285.2	300.0
C8	C13	H13	H14	117.9	120.0
H13	C13	C12	N14	69.8	60.0
H13	C13	C12	H12	310.9	300.1
C8	C13	H14	C12	124.2	120.0
H14	C13	C8	H9	43.9	60.0
C8	C13	H14	H13	242.1	240.0
H14	C13	C12	N14	311.1	300.0
H14	C13	C12	H12	192.2	180.1
H15	N14	C12	H12	298.5	300.0
C12	N14	H15	H16	120.0	124.0
H16	N14	C12	H12	58.5	63.9
C12	N14	H16	H15	240.0	236.0
C25	C26	H20	C27	180.0	180.0
H20	C26	C27	H21	359.4	0.0
H21	C27	C26	H20	359.4	0.0
H22	C28	C27	H21	0.6	0.1