PDB Chemical Component 5E5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5E5

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C13 C12 1.393 1.385
C13 C14 1.390 1.382
C1 C2 1.516 1.507
C12 C11 1.403 1.398
C14 N15 1.327 1.319
C7 C6 1.416 1.411
C7 C8 1.401 1.378
C2 C6 1.428 1.380
C2 N3 1.309 1.341
C11 C8 1.484 1.484
C11 C16 1.402 1.394
C6 C5 1.420 1.474
N15 C16 1.322 1.317
C8 N9 1.330 1.337
N3 N4 1.406 1.400
C5 N4 1.374 1.319
C5 C10 1.390 1.411
N9 C10 1.313 1.308
C7 H1 1.080 1.079
C10 H2 1.080 1.081
N3 H3 1.000 0.970
C1 H4 1.100 1.090
C1 H5 1.100 1.090
C1 H6 1.100 1.090
C12 H7 1.080 1.080
C13 H8 1.080 1.080
C14 H9 1.080 1.080
C16 H10 1.080 1.081

Bond Angles for 5E5

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C13 C12 H7 121.0 120.9
C13 C14 N15 121.3 121.1
C14 C13 H8 120.4 120.4
C13 C14 H9 119.3 119.5
C12 C11 C16 119.4 119.0
C14 N15 C16 121.6 121.8
N15 C14 H9 119.3 119.4
C6 C7 C8 118.3 118.4
C7 C6 C2 136.2 135.7
C7 C6 C5 117.7 117.8
C6 C7 H1 120.8 120.8
C7 C8 N9 121.3 122.2
C8 C7 H1 120.8 120.8
N3 C2 C6 108.8 107.8
C2 C6 C5 106.1 106.5
C2 N3 N4 110.0 110.0
C2 N3 H3 125.0 125.0
C11 C16 N15 120.5 120.6
C11 C16 H10 119.7 119.7
C6 C5 N4 107.3 106.7
N15 C16 H10 119.8 119.7
N4 N3 H3 125.0 125.0
C5 C10 H2 119.5 120.0
N9 C10 H2 119.5 119.9
H4 C1 H5 109.4 109.4
H4 C1 H6 109.5 109.5
H5 C1 H6 109.5 109.5

Torsion Angles for 5E5

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C13 C12 C11 C16 0.5 0.3
C14 C13 C12 H7 180.1 180.0
C13 C14 N15 C16 0.8 359.7
N15 C14 C13 H9 180.0 180.0
C1 C2 C6 C5 178.6 180.0
C1 C2 N3 N4 181.0 180.0
C1 C2 N3 H3 1.0 0.0
C12 C11 C16 N15 359.5 359.5
C12 C11 C16 H10 179.5 179.7
N15 C14 C13 H8 179.2 180.0
C13 C14 N15 H9 180.0 180.0
C11 C16 N15 C14 359.8 0.6
C14 N15 C16 H10 179.8 180.3
C6 C7 C8 N9 359.8 0.0
C8 C7 C6 H1 180.0 180.2
N3 C2 C6 C7 181.1 180.0
C2 C6 C7 C5 178.9 180.1
C7 C6 C5 N4 179.5 180.0
C8 C7 C6 C2 179.1 180.0
C8 C7 C6 C5 0.2 360.0
C6 C7 C8 H1 180.0 179.8
C2 C6 C7 C8 179.1 180.0
C7 C6 C2 C5 181.0 179.9
C2 C6 C7 H1 359.1 359.8
C6 C2 N3 N4 359.6 360.0
C6 C2 N3 H3 179.6 180.0
C2 C6 C5 N4 0.3 360.0
C7 C6 C2 N3 181.1 180.0
N3 C2 C6 C5 0.0 0.0
N4 N3 C2 H3 180.0 180.0
C11 C8 C7 H1 0.5 0.2
C14 N15 C16 C11 359.8 0.6
N15 C16 C11 H10 180.0 179.7
C5 C6 C7 C8 0.2 360.0
C7 C6 C5 C2 179.2 180.1
C5 C6 C7 H1 180.2 179.7
C6 C5 C10 H2 180.7 180.0
C16 N15 C14 H9 180.8 179.7
C11 C16 N15 H10 180.0 180.3
N9 C8 C7 H1 179.8 180.3
C8 N9 C10 H2 179.4 180.0
N4 N3 C2 C6 359.6 360.0
C2 N3 N4 H3 180.0 180.0
C6 C5 N4 N3 359.4 0.0
C5 N4 N3 H3 180.6 180.0
N4 C5 C10 H2 0.7 359.9
C7 C6 C5 C10 359.6 0.0
C2 C6 C5 C10 180.4 180.0
N9 C10 C5 H2 180.0 180.1
C7 C8 N9 C10 0.4 360.0
C5 C10 N9 H2 180.0 179.9
C6 C7 H1 C8 180.0 180.2
H1 C7 C6 C2 359.1 359.8
H1 C7 C6 C5 180.2 179.7
H1 C7 C8 N9 179.8 180.3
H3 N3 C2 C6 179.6 180.0
C2 N3 H3 N4 180.0 180.0
H5 C1 H4 H6 120.0 120.1
H4 C1 H5 H6 240.0 239.9
H4 C1 H6 H5 120.0 120.0
H7 C12 C11 C16 180.4 180.2
H8 C13 C12 H7 0.2 0.1
H8 C13 C14 N15 179.2 180.0
H8 C13 C14 H9 359.2 0.0
C13 C14 H9 N15 180.0 180.0
H9 C14 C13 H8 359.2 0.0
H9 C14 N15 C16 180.8 179.7
C11 C16 H10 N15 180.0 179.7