PDB Chemical Component 5DI

Ideal Model

Chemical Description

Name alpha-D-threo-hexo-2,5-diulo-2,6-pyranosyl fluoride
Synonyms 2-OXO-1,2,DIDEOXY-5F-D-IDOPYRANOSE; alpha-D-threo-hexo-2,5-diulo-2,6-syl fluoride; D-threo-hexo-2,5-diulo-2,6-syl fluoride; threo-hexo-2,5-diulo-2,6-syl fluoride
Formula C6 H9 F O5
Formal charge 0
Molecular weight 180.131 g/mol
Component type D-SACCHARIDE

Chemical features

Atom count 21
Chiral atom count 3
Chiral atoms C3 C4 C5
Observed leaving atoms O6 F1
Bond count 21
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) alpha-D-threo-hexo-2,5-diulo-2,6-pyranosyl fluoride
Systematic name (OpenEye OEToolkits) (4S,5S,6R)-6-fluoranyl-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-one

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@]1(F)OCC(=O)[C@@H](O)[C@@H]1O
SMILES (CACTVS) OC[C]1(F)OCC(=O)[CH](O)[CH]1O
Stereo SMILES (OpenEye) C1C(=O)[C@H]([C@@H]([C@@](O1)(CO)F)O)O
InChI descriptor InChI=1S/C6H9FO5/c7-6(2-8)5(11)4(10)3(9)1-12-6/h4-5,8,10-11H,1-2H2/t4-,5+,6+/m1/s1
InChIKey descriptor VCJAHEOIRFFLTQ-SRQIZXRXSA-N

Status Information

Last modified 2020-07-17
Created 2012-03-14
Release status REL
Model PDB code 4AMW
Processing site EBI