PDB Chemical Component 5C6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5C6

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O09	C08	1.377	1.358
C07	C08	1.390	1.389
C07	C06	1.390	1.379
C08	C10	1.386	1.389
C06	C05	1.389	1.396
C10	C11	1.386	1.379
C05	C11	1.390	1.397
C05	C04	1.501	1.480
C04	C12	1.492	1.480
C04	C03	1.381	1.356
C13	C12	1.388	1.396
C13	C14	1.386	1.378
C12	C18	1.388	1.396
C02	C03	1.499	1.507
C02	C01	1.491	1.530
C14	C15	1.388	1.389
C18	C17	1.388	1.379
C15	C17	1.387	1.389
C15	O16	1.378	1.358
C03	C19	1.503	1.471
C31	C30	1.389	1.361
C31	C32	1.395	1.394
C30	C29	1.424	1.406
C32	C33	1.388	1.362
C29	C28	1.425	1.406
C29	C34	1.366	1.417
C28	C27	1.391	1.362
C19	C35	1.383	1.397
C19	C20	1.390	1.399
C33	C34	1.423	1.404
C35	C23	1.386	1.386
C34	C25	1.428	1.411
C27	C26	1.398	1.391
C20	C21	1.395	1.379
C25	C26	1.394	1.379
C25	N24	1.446	1.393
C23	N24	1.440	1.398
C23	C22	1.387	1.391
C21	C22	1.396	1.383
C01	H1	1.100	1.090
C01	H2	1.100	1.090
C01	H3	1.100	1.090
C02	H4	1.100	1.090
C02	H5	1.100	1.090
C06	H8	1.080	1.079
C07	H9	1.080	1.080
O09	H10	0.950	0.967
C10	H11	1.080	1.079
C11	H12	1.080	1.079
C13	H13	1.080	1.080
C14	H14	1.079	1.080
O16	H15	0.950	0.967
C17	H16	1.080	1.080
C18	H17	1.080	1.081
C20	H18	1.080	1.080
C21	H19	1.080	1.080
C22	H20	1.080	1.080
N24	H21	1.000	0.970
C26	H22	1.080	1.080
C27	H23	1.080	1.080
C28	H24	1.080	1.080
C30	H25	1.079	1.080
C31	H26	1.080	1.080
C32	H27	1.080	1.079
C33	H28	1.080	1.079
C35	H29	1.080	1.080

Bond Angles for 5C6

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O09	C08	C10	119.2	119.9
C07	C08	C10	120.1	120.2
C08	C07	H9	120.0	120.0
C07	C06	H8	120.1	120.1
C08	C10	C11	119.9	120.1
C08	C10	H11	120.1	120.0
C06	C05	C11	120.0	119.8
C05	C11	C10	120.2	119.9
C11	C10	H11	120.0	119.9
C10	C11	H12	119.9	120.0
C05	C11	H12	119.9	120.0
C05	C04	C12	117.2	120.0
C04	C12	C18	120.4	120.0
C04	C03	C19	122.4	120.0
C13	C12	C18	120.1	119.8
C13	C14	C15	119.9	120.1
C14	C13	H13	120.0	120.1
C13	C14	H14	120.0	119.9
C12	C18	C17	119.8	119.9
C12	C18	H17	120.1	120.1
C02	C03	C19	114.0	120.0
C03	C02	H4	107.4	109.5
C03	C02	H5	107.4	109.4
C02	C01	H1	109.5	109.5
C02	C01	H2	109.5	109.5
C02	C01	H3	109.4	109.5
C14	C15	C17	120.0	120.2
C14	C15	O16	120.1	119.9
C15	C14	H14	120.0	119.9
C18	C17	H16	119.9	120.0
O16	C15	C17	119.9	119.9
C15	C17	H16	120.0	120.0
C15	O16	H15	109.5	114.0
C03	C19	C35	116.7	120.1
C03	C19	C20	123.4	120.1
C31	C30	H25	120.3	120.1
C31	C32	C33	120.3	121.0
C32	C31	H26	119.9	119.5
C31	C32	H27	119.8	119.5
C30	C29	C34	120.4	119.3
C32	C33	C34	119.6	119.7
C33	C32	H27	119.8	119.5
C32	C33	H28	120.2	120.2
C29	C28	H24	120.0	120.0
C29	C34	C33	120.0	119.4
C28	C27	H23	120.0	119.5
C20	C19	C35	119.9	119.7
C19	C35	C23	121.0	119.7
C19	C35	H29	119.5	120.1
C19	C20	C21	119.5	120.0
C19	C20	H18	120.2	120.0
C34	C33	H28	120.2	120.1
C27	C26	H22	119.8	119.6
C20	C21	C22	120.2	120.3
C21	C20	H18	120.3	120.0
C20	C21	H19	119.9	119.9
C25	C26	H22	119.8	119.6
C25	N24	H21	121.0	120.0
C23	N24	H21	121.0	120.0
C23	C22	H20	120.0	119.9
C22	C21	H19	119.9	119.9
C21	C22	H20	120.1	119.9
H1	C01	H2	109.4	109.4
H1	C01	H3	109.5	109.5
H2	C01	H3	109.5	109.5
H4	C02	H5	109.5	109.5

Torsion Angles for 5C6

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C07	C08	O09	C10	179.7	179.9
O09	C08	C07	H9	0.1	0.1
O09	C08	C10	C11	180.2	180.0
O09	C08	C10	H11	0.2	360.0
O09	C08	C07	C10	180.3	180.1
C08	C07	C06	H8	180.1	180.1
C07	C08	C10	C11	0.5	0.1
C07	C08	C10	H11	180.5	180.0
C07	C06	C05	C11	359.5	0.0
C10	C08	C07	H9	179.8	180.0
C05	C11	C10	C08	359.2	360.0
C11	C10	C08	H11	180.0	180.0
C08	C10	C11	H12	179.2	180.3
C06	C05	C11	C10	0.8	0.0
C06	C05	C11	H12	180.8	179.7
C06	C05	C04	C12	49.3	115.3
C08	C10	C11	H11	180.0	180.0
C05	C11	C10	H12	180.0	179.7
C08	C10	C11	C05	359.2	360.0
C05	C11	C10	H11	179.2	180.0
C10	C11	C05	H12	180.0	180.3
C11	C05	C04	C12	230.0	295.0
C05	C04	C12	C18	69.2	292.2
C05	C04	C03	C19	192.8	358.1
C12	C04	C03	C19	14.6	178.1
C13	C12	C04	C18	180.4	180.3
C04	C12	C18	C17	180.2	179.8
C04	C12	C18	H17	0.2	0.0
C02	C03	C04	C19	195.9	179.9
C04	C03	C02	H4	357.8	142.6
C04	C03	C02	H5	115.5	22.5
C04	C03	C19	C35	235.0	114.9
C04	C03	C19	C20	56.5	295.2
C04	C12	C13	C18	179.6	179.7
C13	C12	C18	C17	359.8	359.5
C13	C12	C18	H17	179.8	179.7
C14	C13	C12	C18	0.4	0.2
C13	C14	C15	C17	0.2	360.0
C13	C14	C15	O16	180.2	180.0
C15	C14	C13	H14	180.0	180.0
C12	C18	C17	H16	180.0	180.3
C04	C03	C02	C19	165.3	180.1
C03	C02	C01	H1	180.0	294.2
C03	C02	C01	H2	300.0	54.2
C03	C02	C01	H3	60.0	174.2
C02	C03	C19	C35	40.2	295.0
C02	C03	C19	C20	221.8	115.3
H4	C02	C03	H5	242.3	120.0
H1	C01	C02	H2	240.0	240.1
H1	C01	C02	H3	120.0	120.0
H2	C01	C02	H3	240.0	240.0
C15	C14	C13	H13	179.7	180.1
C13	C14	C15	H14	180.0	180.0
O16	C15	C14	C17	180.0	180.0
C14	C15	C17	H16	180.0	180.0
C14	C15	O16	H15	180.0	90.0
C12	C18	C17	H17	180.0	180.2
C15	C17	C18	H16	180.0	180.2
C12	C18	C17	C15	360.0	0.5
C14	C15	C17	O16	180.0	180.0
C17	C15	C14	H14	180.2	180.0
C18	C17	C15	H16	180.0	179.8
C17	C15	O16	H15	360.0	270.0
C14	C15	O16	C17	180.0	180.0
O16	C15	C14	H14	0.2	360.0
O16	C15	C17	H16	0.1	0.0
C19	C03	C02	H4	192.5	322.5
C19	C03	C02	H5	310.2	202.5
C20	C19	C03	C35	181.6	180.3
C03	C19	C35	C23	180.8	179.7
C03	C19	C35	H29	0.8	0.1
C03	C19	C20	C21	179.2	180.0
C03	C19	C20	H18	359.2	360.0
C31	C30	C29	C34	360.0	0.2
C32	C31	C30	H25	179.9	180.0
C31	C32	C33	C34	359.6	359.7
C33	C32	C31	H27	180.0	180.1
C31	C32	C33	H28	179.6	179.9
C30	C29	C28	H24	360.0	0.0
C30	C29	C34	C33	360.0	359.6
C33	C32	C31	H26	180.4	180.0
C31	C32	C33	H27	180.0	179.9
C29	C34	C33	C32	0.3	0.5
C34	C33	C32	H28	180.0	179.8
C29	C28	C27	H23	180.0	180.0
C32	C33	C34	C29	0.3	0.5
C34	C29	C28	H24	180.0	179.8
C29	C34	C33	H28	180.3	180.3
C28	C27	C26	H22	180.1	180.0
C03	C19	C35	C20	181.5	180.3
C35	C19	C20	C21	0.8	0.3
C35	C19	C20	H18	180.8	180.2
C03	C19	C20	C35	178.4	179.7
C20	C19	C35	C23	359.3	359.5
C20	C19	C35	H29	179.3	179.8
C19	C20	C21	C22	359.4	0.0
C21	C20	C19	H18	180.0	180.0
C19	C20	C21	H19	179.3	180.0
C34	C33	C32	H27	179.6	179.8
C32	C33	C34	H28	180.0	180.2
C19	C35	C23	H29	180.0	180.3
C35	C23	N24	H21	147.7	222.6
C35	C23	C22	H20	179.8	179.7
C34	C25	C26	H22	179.9	180.2
C34	C25	N24	H21	302.6	8.5
C25	C26	C27	H22	180.0	180.0
C21	C20	C19	C35	0.8	0.3
C19	C20	C21	H18	180.0	180.0
C22	C21	C20	H19	180.0	180.0
C20	C21	C22	H20	180.3	180.0
C27	C26	C25	H22	180.0	180.0
C26	C25	N24	H21	122.8	188.7
C23	N24	C25	H21	180.0	179.9
C19	C35	C23	N24	179.6	180.3
C25	N24	C23	H21	180.0	180.1
N24	C23	C22	H20	0.6	359.9
C19	C35	C23	C22	0.4	0.5
C23	C22	C21	H19	180.4	180.0
C21	C22	C23	H20	180.0	180.1
C22	C21	C20	H18	179.4	180.0
C20	C21	C22	H19	180.0	180.0
C23	C22	C21	H20	180.0	179.9
C02	C01	H1	H2	120.0	120.0
C02	C01	H1	H3	240.0	240.0
H2	C01	H1	H3	120.0	120.0
C02	C01	H2	H1	240.0	240.0
C02	C01	H2	H3	120.0	120.0
H1	C01	H2	H3	240.0	240.0
C02	C01	H3	H1	120.0	120.0
C02	C01	H3	H2	240.0	240.0
H1	C01	H3	H2	120.0	120.0
H4	C02	C03	C19	192.5	322.5
C03	C02	H4	H5	116.3	240.0
H4	C02	C01	H1	58.9	54.2
H4	C02	C01	H2	178.9	174.2
H4	C02	C01	H3	298.9	294.2
H5	C02	C03	C19	310.2	202.5
C03	C02	H5	H4	243.7	120.0
H5	C02	C01	H1	301.1	174.3
H5	C02	C01	H2	61.1	294.2
H5	C02	C01	H3	181.1	54.2
H8	C06	C05	C11	179.6	179.9
H9	C07	C08	C10	179.8	180.0
H9	C07	C06	H8	0.1	0.0
H10	O09	C08	C10	0.3	270.0
C08	C10	H11	C11	180.0	180.0
H11	C10	C11	H12	359.2	0.3
C05	C11	H12	C10	180.0	180.3
H12	C11	C10	H11	359.2	0.3
H13	C13	C12	C18	180.3	180.2
H13	C13	C14	C15	179.7	180.1
H13	C13	C14	H14	359.7	0.1
C13	C14	H14	C15	180.0	180.0
H14	C14	C13	H13	359.7	0.1
H14	C14	C15	C17	180.2	180.0
H14	C14	C15	O16	0.2	360.0
H15	O16	C15	C17	360.0	270.0
C12	C18	H17	C17	180.0	179.8
H17	C18	C17	H16	360.0	0.0
H18	C20	C19	C35	180.8	180.2
C19	C20	H18	C21	180.0	180.0
H18	C20	C21	C22	179.4	180.0
H18	C20	C21	H19	359.3	0.0
C20	C21	H19	C22	180.0	180.0
H19	C21	C20	H18	359.3	0.0
H19	C21	C22	H20	0.3	0.0
H20	C22	C21	H19	0.3	0.0
H23	C27	C26	H22	0.0	0.0
H24	C28	C27	H23	0.0	360.0
H25	C30	C29	C34	180.0	180.2
H26	C31	C30	H25	359.9	360.0
H26	C31	C32	C33	180.4	180.0
H26	C31	C32	H27	0.4	360.0
C31	C32	H27	C33	180.0	180.1
H27	C32	C31	H26	0.4	360.0
H27	C32	C33	C34	179.6	179.8
H27	C32	C33	H28	359.6	360.0
C32	C33	H28	C34	180.0	179.8
H28	C33	C32	H27	359.6	360.0
C19	C35	H29	C23	180.0	179.7