PDB Chemical Component 5C0

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5C0

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C17	C18	1.374	1.385
C17	C16	1.390	1.378
C18	C19	1.392	1.382
C16	C15	1.407	1.396
C19	C20	1.401	1.386
C1	C	1.483	1.531
C1	C2	1.478	1.529
C15	C20	1.409	1.402
C15	C14	1.505	1.477
C20	O	1.377	1.357
C	C2	1.477	1.530
C2	N	1.458	1.465
N	C3	1.348	1.386
C5	C6	1.526	1.529
C5	C4	1.510	1.504
C13	C14	1.462	1.414
C13	C12	1.363	1.351
C14	O1	1.260	1.219
C6	N3	1.468	1.482
C6	C7	1.534	1.541
C3	C4	1.446	1.397
C3	N2	1.350	1.330
C4	C10	1.448	1.375
C12	N3	1.332	1.366
N3	C9	1.471	1.485
C7	C8	1.560	1.544
N2	C11	1.337	1.318
C10	C9	1.587	1.514
C10	N1	1.339	1.323
C9	C8	1.538	1.551
C11	N1	1.338	1.319
C5	H1	1.099	1.089
C5	H2	1.100	1.089
C6	H3	1.100	1.089
C7	H4	1.100	1.090
C7	H5	1.100	1.090
C8	H6	1.100	1.090
C8	H7	1.100	1.090
C9	H8	1.100	1.091
C11	H9	1.080	1.081
C12	H10	1.080	1.080
C13	H11	1.080	1.080
O	H12	0.950	0.967
C19	H13	1.080	1.081
C18	H14	1.080	1.080
C17	H15	1.080	1.080
C16	H16	1.080	1.080
N	H17	1.000	0.970
C2	H18	1.101	1.090
C1	H19	1.100	1.090
C1	H20	1.100	1.090
C	H21	1.100	1.090
C	H22	1.101	1.090

Bond Angles for 5C0

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C17	C18	H14	120.0	119.8
C16	C17	H15	119.8	119.9
C17	C16	H16	119.5	120.0
C18	C19	H13	119.9	120.0
C	C1	H19	120.0	117.5
C	C1	H20	120.0	117.5
C1	C	H21	120.0	117.5
C1	C	H22	120.0	117.5
C1	C2	H18	115.9	117.5
C15	C20	O	120.8	120.1
C15	C14	O1	117.9	120.0
C20	O	H12	109.5	114.0
C	C2	H18	115.9	117.5
C2	N	H17	105.9	120.0
C5	C6	N3	109.2	108.0
C5	C6	C7	111.5	110.3
C6	C5	H1	108.7	109.2
C6	C5	H2	108.7	109.2
C5	C6	H3	111.1	110.9
C5	C4	C10	120.7	121.9
C13	C14	O1	120.7	120.0
C14	C13	H11	120.1	120.0
C13	C12	H10	116.3	120.0
C7	C6	N3	101.8	105.0
C6	N3	C12	128.5	128.4
C6	N3	C9	107.8	103.3
N3	C6	H3	112.0	111.0
C6	C7	C8	105.4	105.0
C7	C6	H3	111.0	111.4
C6	C7	H4	110.5	110.3
C6	C7	H5	110.5	110.3
C4	C10	C9	118.7	119.9
C4	C10	N1	121.0	119.8
N3	C12	H10	116.3	120.0
N3	C9	H8	115.6	113.0
C8	C7	H4	110.5	110.3
C8	C7	H5	110.5	110.3
C7	C8	H6	110.5	110.5
C7	C8	H7	110.5	110.5
N2	C11	H9	115.7	119.1
C10	C9	H8	113.6	113.7
C9	C8	H6	110.5	110.5
C9	C8	H7	110.5	110.6
H1	C5	H2	109.5	109.2
H4	C7	H5	109.4	110.4
H6	C8	H7	109.5	110.4
H19	C1	H20	109.5	115.6
H21	C	H22	109.5	115.6

Torsion Angles for 5C0

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C17	C18	C19	H13	179.8	180.0
C16	C17	C18	H14	178.0	179.7
C19	C20	O	H12	185.4	270.1
C	C1	C2	H18	106.4	107.5
C1	C	C2	H18	253.6	252.5
H19	C1	C	H20	218.8	144.9
H21	C	C1	H22	218.9	145.1
C	C2	C1	H18	253.6	252.5
C1	C2	N	H17	269.5	25.0
C20	C15	C14	O1	356.1	360.0
C15	C20	O	H12	7.2	90.0
C13	C14	C15	O1	179.4	180.0
C15	C14	C13	H11	7.0	360.0
C1	C2	C	H18	106.4	107.5
C	C2	N	H17	199.8	316.3
C6	C5	C4	C10	9.4	6.8
C7	C6	C5	N3	111.8	114.2
C5	C6	N3	C12	253.9	257.2
C5	C6	N3	C9	76.1	77.2
N3	C6	C5	H3	123.9	121.9
C5	C6	C7	C8	267.3	265.4
C7	C6	C5	H3	235.7	236.1
C5	C6	C7	H4	26.7	24.3
C5	C6	C7	H5	147.9	146.6
H1	C5	C6	H2	240.9	119.4
C5	C4	C10	C9	355.6	359.0
C5	C4	C10	N1	179.2	179.3
C15	C14	C13	O1	180.6	180.0
C14	C13	C12	H10	15.2	360.0
N3	C12	C13	H10	180.0	180.1
O1	C14	C13	H11	186.4	180.0
C5	C6	N3	C7	118.0	117.7
N3	C6	C5	H1	77.3	195.4
N3	C6	C5	H2	196.4	76.0
C5	C6	N3	H3	236.6	238.2
N3	C6	C7	C8	23.6	21.6
C7	C6	N3	H3	118.6	120.5
N3	C6	C7	H4	143.0	140.4
N3	C6	C7	H5	264.2	262.7
C6	N3	C12	H10	174.8	0.0
C6	N3	C9	H8	166.7	165.9
C5	C6	C7	N3	243.7	243.9
C7	C6	C5	H1	189.0	309.6
C7	C6	C5	H2	308.1	190.2
C5	C6	C7	H3	124.4	123.6
C7	C6	N3	C12	135.9	139.5
C7	C6	N3	C9	318.1	319.6
N3	C6	C7	H3	240.7	239.8
C8	C7	C6	H4	240.6	241.2
C8	C7	C6	H5	119.4	118.9
C6	C7	C8	H6	120.1	123.2
C6	C7	C8	H7	241.4	245.7
H4	C7	C6	H5	238.8	237.7
C3	N2	C11	H9	180.3	179.8
C4	C10	C9	H8	159.6	157.4
C13	C12	N3	H10	180.0	179.9
C6	N3	C12	C9	182.6	180.1
C12	N3	C6	H3	17.3	19.0
C12	N3	C9	H8	348.8	345.9
C6	N3	C9	C12	177.9	180.0
C9	N3	C6	H3	199.5	199.1
C10	C9	N3	H8	126.4	125.7
N3	C9	C8	H6	215.9	212.4
N3	C9	C8	H7	94.6	89.8
C8	C7	C6	N3	23.6	21.6
C8	C7	C6	H3	142.9	141.8
C6	C7	C8	H4	119.4	118.8
C6	C7	C8	H5	240.6	241.1
C9	C8	C7	H6	240.7	241.3
C9	C8	C7	H7	119.4	118.8
H4	C7	C8	H5	121.2	122.3
H6	C8	C7	H7	238.7	237.5
C6	N3	C9	C10	293.1	291.5
C4	C10	C9	N1	183.6	180.3
N3	C9	C10	H8	232.3	234.7
C10	C9	C8	H6	325.7	324.5
C10	C9	C8	H7	204.3	202.0
C4	C10	N1	C9	176.4	179.7
C6	N3	C9	C8	42.3	43.1
C4	C10	C9	C8	285.1	282.1
C9	C8	C7	H4	241.4	245.7
C9	C8	C7	H5	120.2	123.4
C7	C8	C9	H6	119.3	118.7
C7	C8	C9	H7	240.6	241.2
H6	C8	C9	H7	121.3	122.5
H1	C5	C6	N3	77.3	195.4
H1	C5	C6	C7	189.0	309.6
C6	C5	H1	H2	118.6	240.6
H1	C5	C6	H3	313.3	73.5
H1	C5	C4	C10	249.0	127.1
H2	C5	C6	N3	196.4	76.0
H2	C5	C6	C7	308.1	190.2
C6	C5	H2	H1	241.4	119.4
H2	C5	C6	H3	72.4	314.1
H2	C5	C4	C10	129.9	246.5
C5	C6	H3	N3	122.3	120.1
C5	C6	H3	C7	235.4	236.7
H3	C6	C5	H1	313.3	73.5
H3	C6	C5	H2	72.4	314.1
C7	C6	H3	N3	246.9	243.4
H3	C6	N3	C12	17.3	19.0
H3	C6	N3	C9	199.5	199.1
H3	C6	C7	C8	142.9	141.8
H3	C6	C7	H4	262.3	260.7
H3	C6	C7	H5	23.6	22.9
H4	C7	C6	N3	143.0	140.4
C6	C7	H4	C8	243.7	244.4
H4	C7	C6	H3	262.3	260.7
C6	C7	H4	H5	121.9	122.2
C8	C7	H4	H5	238.2	237.8
H4	C7	C8	H6	0.8	4.4
H4	C7	C8	H7	122.1	126.8
H5	C7	C6	N3	264.2	262.7
C6	C7	H5	C8	116.3	115.6
H5	C7	C6	H3	23.6	22.9
C6	C7	H5	H4	238.1	237.8
C8	C7	H5	H4	121.9	122.2
H5	C7	C8	H6	239.5	242.1
H5	C7	C8	H7	0.8	4.6
H6	C8	C7	H4	0.8	4.4
H6	C8	C7	H5	239.5	242.1
C7	C8	H6	H7	121.9	122.5
C9	C8	H6	H7	238.0	237.3
H7	C8	C7	H4	122.1	126.8
H7	C8	C7	H5	0.8	4.6
C7	C8	H7	H6	238.1	237.5
C9	C8	H7	H6	122.0	122.6
H8	C9	C8	H6	90.7	89.6
H8	C9	C8	H7	329.4	327.1
H11	C13	C14	O1	186.4	180.0
H11	C13	C12	H10	195.2	180.0
H14	C18	C19	H13	359.8	359.9
H15	C17	C18	H14	358.0	0.1
H15	C17	C16	H16	1.9	359.6
H16	C16	C17	H15	1.9	359.6
H18	C2	N	H17	54.4	170.6
C	C1	H19	H20	144.8	214.4
H19	C1	C	H21	218.9	145.0
H19	C1	C	H22	360.0	359.9
H19	C1	C2	H18	356.9	214.9
C	C1	H20	H19	215.1	145.6
H20	C1	C	H21	0.0	0.1
H20	C1	C	H22	141.2	215.0
H20	C1	C2	H18	215.8	0.0
H21	C	C1	H19	218.9	145.0
H21	C	C1	H20	0.0	0.1
C1	C	H21	H22	144.8	214.2
H21	C	C2	H18	144.2	359.9
H22	C	C1	H19	360.0	359.9
H22	C	C1	H20	141.2	215.0
C1	C	H22	H21	215.2	145.8
H22	C	C2	H18	3.1	145.0