PDB Chemical Component 5BV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 5BV

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N C32 1.448 1.468
O34 C33 1.234 1.208
O C 1.228 1.209
C33 C32 1.523 1.507
C33 O35 1.314 1.342
C C43 1.548 1.506
O35 C36 1.448 1.452
C36 C43 1.507 1.530
C36 C37 1.524 1.530
C38 C37 1.524 1.530
C38 C39 1.528 1.530
C43 C44 1.529 1.529
C39 C40 1.529 1.530
C40 C41 1.528 1.529
C41 C42 1.527 1.530
N H 1.000 1.009
N H2 1.000 1.009
C32 H4 1.100 1.090
C32 H5 1.100 1.091
C36 H6 1.100 1.090
C37 H7 1.100 1.090
C37 H8 1.100 1.090
C38 H9 1.100 1.090
C38 H10 1.100 1.090
C39 H11 1.100 1.090
C39 H12 1.100 1.090
C40 H13 1.100 1.090
C40 H14 1.100 1.091
C41 H15 1.100 1.090
C41 H16 1.100 1.090
C42 H17 1.101 1.089
C42 H18 1.100 1.090
C42 H19 1.100 1.090
C43 H20 1.099 1.091
C44 H21 1.100 1.090
C44 H22 1.100 1.091
C44 H23 1.100 1.091
C OXT 1.347 1.342
OXT HXT 0.950 0.967

Bond Angles for 5BV

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C32 N H 109.5 111.0
C32 N H2 109.5 111.0
N C32 H4 109.4 109.5
N C32 H5 109.3 109.5
O34 C33 C32 124.6 120.0
O34 C33 O35 123.4 120.0
O C C43 121.4 119.9
O C OXT 121.0 120.0
C33 C32 H4 109.3 109.5
C33 C32 H5 109.3 109.5
C33 O35 C36 117.5 117.0
C C43 H20 108.7 109.5
O35 C36 C43 105.2 109.5
O35 C36 C37 107.8 109.5
O35 C36 H6 112.1 109.4
C37 C36 C43 109.3 109.5
C36 C43 C44 110.0 109.5
C43 C36 H6 111.2 109.5
C36 C43 H20 109.2 109.4
C37 C36 H6 111.0 109.4
C36 C37 H7 109.1 109.5
C36 C37 H8 109.1 109.4
C38 C37 H7 109.2 109.5
C38 C37 H8 109.1 109.5
C38 C39 C40 109.6 109.5
C39 C38 H9 109.7 109.5
C39 C38 H10 109.7 109.5
C38 C39 H11 109.4 109.5
C38 C39 H12 109.4 109.5
C44 C43 H20 108.9 109.5
C43 C44 H21 109.5 109.5
C43 C44 H22 109.5 109.5
C43 C44 H23 109.4 109.5
C39 C40 C41 109.6 109.5
C40 C39 H11 109.4 109.5
C40 C39 H12 109.4 109.5
C39 C40 H13 109.4 109.5
C39 C40 H14 109.4 109.4
C40 C41 C42 109.1 109.5
C41 C40 H13 109.4 109.5
C41 C40 H14 109.4 109.5
C40 C41 H15 109.6 109.5
C40 C41 H16 109.6 109.5
C42 C41 H15 109.6 109.5
C42 C41 H16 109.6 109.5
C41 C42 H17 109.5 109.5
C41 C42 H18 109.5 109.5
C41 C42 H19 109.5 109.5
H N H2 109.5 111.0
H4 C32 H5 109.5 109.4
H7 C37 H8 109.5 109.5
H9 C38 H10 109.5 109.4
H11 C39 H12 109.5 109.4
H13 C40 H14 109.5 109.5
H15 C41 H16 109.4 109.4
H17 C42 H18 109.4 109.5
H17 C42 H19 109.5 109.5
H18 C42 H19 109.5 109.4
H21 C44 H22 109.5 109.5
H21 C44 H23 109.5 109.4
H22 C44 H23 109.4 109.4
C OXT HXT 109.5 117.0

Torsion Angles for 5BV

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O34 C33 C32 N 316.5 360.0
C33 C32 N H4 239.9 240.0
C33 C32 N H5 120.1 120.0
H N C32 H2 240.0 236.0
H4 C32 N H5 240.2 240.0
O34 C33 C32 H4 196.4 240.0
O34 C33 C32 H5 76.6 120.0
O34 C33 O35 C36 341.3 0.1
O C C43 H20 177.1 120.0
O C OXT HXT 360.0 360.0
C33 C32 N H 180.0 56.1
C33 C32 N H2 300.0 180.0
N C32 C33 H4 120.1 120.0
N C32 C33 H5 239.9 239.9
O34 C33 C32 O35 181.1 180.0
C32 C33 O35 C36 162.4 180.0
H4 C32 C33 H5 119.8 119.9
O34 C33 O35 C32 178.9 180.0
C33 O35 C36 C43 164.6 89.9
C33 O35 C36 C37 281.2 210.0
C33 O35 C36 H6 43.6 329.9
O C C43 OXT 178.7 180.0
C C43 C36 H6 66.7 60.1
C36 C43 C H20 119.9 119.9
C44 C43 C H20 241.2 240.0
C C43 C44 H21 180.0 300.0
C C43 C44 H22 300.0 60.0
C C43 C44 H23 60.0 180.0
C37 C36 O35 C43 116.5 120.0
O35 C36 C43 C44 184.1 180.0
C43 C36 O35 H6 121.0 120.0
O35 C36 C43 H20 64.6 60.0
C37 C36 O35 H6 237.5 240.1
O35 C36 C37 H7 246.6 185.0
O35 C36 C37 H8 6.2 305.0
O C C43 C36 297.0 239.9
C C43 C36 H20 240.4 240.0
O35 C36 C43 C37 115.5 120.0
O35 C36 C43 H6 238.4 240.0
C37 C36 C43 H6 122.9 120.0
C43 C36 C37 H7 0.5 305.0
C43 C36 C37 H8 120.0 65.0
C44 C43 C36 H20 119.5 120.0
C36 C43 C44 H21 301.7 60.0
C36 C43 C44 H22 61.7 180.1
C36 C43 C44 H23 181.6 300.0
O35 C36 C37 C43 246.2 239.9
O35 C36 C37 H6 123.2 119.9
C37 C36 C43 C44 68.6 60.0
C43 C36 C37 H6 237.0 240.0
C37 C36 C43 H20 309.1 300.0
C38 C37 C36 H7 239.8 240.0
C38 C37 C36 H8 120.2 120.0
H7 C37 C36 H8 240.4 240.0
C38 C37 C36 C43 240.2 185.0
C38 C37 C36 H6 3.2 305.0
C36 C37 C38 H7 120.2 120.0
C36 C37 C38 H8 239.8 240.0
H7 C37 C38 H8 119.6 120.0
C39 C38 C37 H7 39.0 60.0
C39 C38 C37 H8 279.4 300.0
C38 C39 C40 C41 191.4 180.0
C40 C39 C38 H11 240.0 240.0
C40 C39 C38 H12 120.0 120.0
C38 C39 C40 H13 311.4 300.0
C38 C39 C40 H14 71.4 60.0
H9 C38 C39 H10 120.3 120.0
H11 C39 C38 H12 240.0 240.0
O C C43 C44 58.3 360.0
C C43 C44 H20 118.7 120.0
C44 C43 C36 H6 305.7 300.0
C36 C43 C44 H20 240.3 240.0
H21 C44 C43 H22 240.0 239.9
H21 C44 C43 H23 120.0 120.0
H22 C44 C43 H23 240.0 240.0
C40 C39 C38 H9 307.1 60.0
C40 C39 C38 H10 186.8 300.0
C38 C39 C40 H11 120.0 120.0
C38 C39 C40 H12 240.0 240.0
C39 C40 C41 C42 168.2 180.0
C41 C40 C39 H13 240.0 240.0
C41 C40 C39 H14 120.0 120.0
C39 C40 C41 H15 288.1 300.0
C39 C40 C41 H16 48.2 60.0
H11 C39 C40 H12 120.0 120.0
H13 C40 C39 H14 240.1 240.0
C41 C40 C39 H11 71.4 60.0
C41 C40 C39 H12 311.4 300.0
C39 C40 C41 H13 120.0 120.0
C39 C40 C41 H14 240.0 240.0
C42 C41 C40 H15 240.0 240.0
C42 C41 C40 H16 120.0 120.0
C40 C41 C42 H17 180.0 300.0
C40 C41 C42 H18 300.0 60.0
C40 C41 C42 H19 60.0 180.0
H13 C40 C41 H14 120.0 120.0
H15 C41 C40 H16 239.9 240.0
C42 C41 C40 H13 48.1 60.0
C42 C41 C40 H14 288.2 300.0
C40 C41 C42 H15 120.0 120.0
C40 C41 C42 H16 240.0 240.0
H15 C41 C42 H16 120.1 120.0
H17 C42 C41 H18 240.0 240.0
H17 C42 C41 H19 120.0 120.0
H18 C42 C41 H19 240.0 240.1
C32 N H H2 120.0 124.0
H N C32 H4 300.1 176.1
H N C32 H5 59.9 296.0
C32 N H2 H 239.9 236.0
H2 N C32 H4 60.1 300.0
H2 N C32 H5 180.0 60.0
H4 C32 N H 300.1 176.1
H4 C32 N H2 60.1 300.0
N C32 H4 H5 119.8 120.0
C33 C32 H4 H5 240.2 240.0
H5 C32 N H 59.9 296.0
H5 C32 N H2 180.0 60.0
N C32 H5 H4 240.2 240.0
C33 C32 H5 H4 119.8 120.0
O35 C36 H6 C43 117.5 120.0
O35 C36 H6 C37 239.3 240.1
C37 C36 H6 C43 238.1 240.0
H6 C36 C43 C44 305.7 300.0
H6 C36 C43 H20 186.2 180.0
H6 C36 C37 H7 123.5 65.0
H6 C36 C37 H8 243.1 185.0
H7 C37 C36 C43 0.5 305.0
H7 C37 C36 H6 123.5 65.0
C36 C37 H7 H8 119.4 120.0
C38 C37 H7 H8 240.6 240.0
H8 C37 C36 C43 120.0 65.0
H8 C37 C36 H6 243.1 185.0
C36 C37 H8 H7 240.6 240.0
C38 C37 H8 H7 119.4 120.0
H9 C38 C37 H7 158.9 180.0
H9 C38 C37 H8 39.3 60.0
H9 C38 C39 C40 307.1 60.0
C39 C38 H9 H10 239.6 240.0
H9 C38 C39 H11 67.1 180.0
H9 C38 C39 H12 187.1 300.0
H10 C38 C37 H7 279.2 300.0
H10 C38 C37 H8 159.6 180.0
H10 C38 C39 C40 186.8 300.0
C39 C38 H10 H9 120.4 120.0
H10 C38 C39 H11 306.8 60.0
H10 C38 C39 H12 66.8 180.0
C38 C39 H11 C40 239.8 240.0
H11 C39 C38 H9 67.1 180.0
H11 C39 C38 H10 306.8 60.0
C38 C39 H11 H12 119.9 120.0
H11 C39 C40 C41 71.4 60.0
C40 C39 H11 H12 240.1 240.0
H11 C39 C40 H13 191.4 180.0
H11 C39 C40 H14 311.3 300.0
C38 C39 H12 C40 120.1 120.0
H12 C39 C38 H9 187.1 300.0
H12 C39 C38 H10 66.8 180.0
C38 C39 H12 H11 240.1 240.0
H12 C39 C40 C41 311.4 300.0
C40 C39 H12 H11 119.9 120.0
H12 C39 C40 H13 71.4 60.0
H12 C39 C40 H14 191.4 180.0
C39 C40 H13 C41 239.8 240.0
H13 C40 C39 H11 191.4 180.0
H13 C40 C39 H12 71.4 60.0
C39 C40 H13 H14 119.9 120.0
H13 C40 C41 C42 48.1 60.0
C41 C40 H13 H14 240.1 240.0
H13 C40 C41 H15 168.1 180.0
H13 C40 C41 H16 288.1 300.0
C39 C40 H14 C41 120.1 120.0
H14 C40 C39 H11 311.3 300.0
H14 C40 C39 H12 191.4 180.0
C39 C40 H14 H13 240.1 240.0
H14 C40 C41 C42 288.2 300.0
C41 C40 H14 H13 119.9 120.0
H14 C40 C41 H15 48.1 60.0
H14 C40 C41 H16 168.2 179.9
C40 C41 H15 C42 240.3 240.0
H15 C41 C40 H13 168.1 180.0
H15 C41 C40 H14 48.1 60.0
C40 C41 H15 H16 120.2 120.0
C42 C41 H15 H16 239.8 240.0
H15 C41 C42 H17 60.0 180.0
H15 C41 C42 H18 180.0 300.0
H15 C41 C42 H19 300.0 60.0
C40 C41 H16 C42 119.7 120.0
H16 C41 C40 H13 288.1 300.0
H16 C41 C40 H14 168.2 179.9
C40 C41 H16 H15 239.8 240.0
C42 C41 H16 H15 120.1 120.0
H16 C41 C42 H17 300.0 60.0
H16 C41 C42 H18 60.0 180.1
H16 C41 C42 H19 180.0 300.0
H17 C42 C41 H15 60.0 180.0
H17 C42 C41 H16 300.0 60.0
C41 C42 H17 H18 120.0 120.0
C41 C42 H17 H19 240.0 240.0
H18 C42 H17 H19 120.0 120.0
H18 C42 C41 H15 180.0 300.0
H18 C42 C41 H16 60.0 180.1
C41 C42 H18 H17 240.0 240.0
C41 C42 H18 H19 120.0 120.0
H17 C42 H18 H19 240.0 240.0
H19 C42 C41 H15 300.0 60.0
H19 C42 C41 H16 180.0 300.0
C41 C42 H19 H17 120.0 120.0
C41 C42 H19 H18 240.0 240.0
H17 C42 H19 H18 120.0 120.0
C36 C43 H20 C44 120.2 120.0
H20 C43 C36 H6 186.2 180.0
H20 C43 C44 H21 61.3 179.9
H20 C43 C44 H22 181.4 300.0
H20 C43 C44 H23 301.3 60.0
H21 C44 C43 H20 61.3 179.9
C43 C44 H21 H22 120.0 120.0
C43 C44 H21 H23 240.0 240.0
H22 C44 H21 H23 120.0 120.0
H22 C44 C43 H20 181.4 300.0
C43 C44 H22 H21 240.0 240.0
C43 C44 H22 H23 120.0 120.0
H21 C44 H22 H23 240.0 240.0
H23 C44 C43 H20 301.3 60.0
C43 C44 H23 H21 120.0 120.0
C43 C44 H23 H22 240.0 240.0
H21 C44 H23 H22 120.0 120.0
O C OXT C43 181.3 180.0
OXT C C43 H20 358.5 300.0