PDB Chemical Component 5B1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 5B1
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C7 |
C6 |
1.399 |
1.397 |
C7 |
C1 |
1.416 |
1.464 |
C7 |
C2 |
1.401 |
1.408 |
C6 |
C5 |
1.398 |
1.366 |
C1 |
N1 |
1.343 |
1.398 |
C1 |
N2 |
1.319 |
1.306 |
C5 |
C4 |
1.405 |
1.390 |
C5 |
BR1 |
1.891 |
1.891 |
C4 |
C3 |
1.404 |
1.366 |
C3 |
C2 |
1.406 |
1.393 |
C2 |
N3 |
1.366 |
1.371 |
N3 |
N2 |
1.346 |
1.398 |
C6 |
H6 |
1.080 |
1.080 |
N1 |
HN1 |
1.000 |
0.970 |
N1 |
HN1A |
1.000 |
0.970 |
C4 |
H4 |
1.080 |
1.080 |
C3 |
H3 |
1.080 |
1.080 |
N3 |
HN3 |
0.999 |
0.970 |
Bond Angles for 5B1
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C7 |
C1 |
135.0 |
134.0 |
C6 |
C7 |
C2 |
119.3 |
119.7 |
C7 |
C6 |
C5 |
117.5 |
119.6 |
C7 |
C6 |
H6 |
121.3 |
120.2 |
C1 |
C7 |
C2 |
105.7 |
106.3 |
C7 |
C1 |
N1 |
124.8 |
126.1 |
C7 |
C1 |
N2 |
111.1 |
107.7 |
C7 |
C2 |
C3 |
123.9 |
119.4 |
C7 |
C2 |
N3 |
104.1 |
106.8 |
C6 |
C5 |
C4 |
123.1 |
120.6 |
C6 |
C5 |
BR1 |
116.4 |
119.7 |
C5 |
C6 |
H6 |
121.3 |
120.2 |
N1 |
C1 |
N2 |
124.1 |
126.2 |
C1 |
N1 |
HN1 |
109.5 |
120.0 |
C1 |
N1 |
HN1A |
109.4 |
120.0 |
C1 |
N2 |
N3 |
105.3 |
110.0 |
C4 |
C5 |
BR1 |
120.5 |
119.7 |
C5 |
C4 |
C3 |
120.0 |
120.8 |
C5 |
C4 |
H4 |
120.0 |
119.6 |
C4 |
C3 |
C2 |
116.2 |
119.8 |
C3 |
C4 |
H4 |
120.0 |
119.6 |
C4 |
C3 |
H3 |
121.9 |
120.1 |
C3 |
C2 |
N3 |
132.0 |
133.7 |
C2 |
C3 |
H3 |
121.9 |
120.1 |
C2 |
N3 |
N2 |
113.8 |
109.2 |
C2 |
N3 |
HN3 |
123.1 |
125.4 |
N2 |
N3 |
HN3 |
123.1 |
125.4 |
HN1 |
N1 |
HN1A |
109.5 |
120.0 |
Torsion Angles for 5B1
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C7 |
C6 |
C2 |
179.5 |
179.7 |
C6 |
C7 |
C1 |
N1 |
0.3 |
0.0 |
C6 |
C7 |
C1 |
N2 |
180.1 |
180.0 |
C6 |
C7 |
C2 |
C3 |
0.0 |
359.4 |
C6 |
C7 |
C2 |
N3 |
179.5 |
180.0 |
C7 |
C6 |
C5 |
C4 |
0.5 |
0.0 |
C7 |
C6 |
C5 |
BR1 |
180.3 |
180.0 |
C5 |
C6 |
C7 |
H6 |
180.0 |
180.0 |
C6 |
C7 |
C1 |
C2 |
180.5 |
180.3 |
C1 |
C7 |
C6 |
C5 |
179.1 |
180.0 |
C1 |
C7 |
C6 |
H6 |
359.1 |
359.9 |
C1 |
C7 |
C2 |
C3 |
180.4 |
179.6 |
C1 |
C7 |
C2 |
N3 |
359.9 |
0.2 |
N1 |
C1 |
C7 |
N2 |
180.2 |
180.0 |
C7 |
C1 |
N1 |
HN1 |
76.5 |
0.1 |
C7 |
C1 |
N1 |
HN1A |
196.5 |
180.0 |
C7 |
C1 |
N2 |
N3 |
0.7 |
0.2 |
C6 |
C7 |
C2 |
C1 |
179.6 |
179.8 |
C2 |
C7 |
C6 |
C5 |
359.7 |
0.3 |
C2 |
C7 |
C6 |
H6 |
179.7 |
180.2 |
C2 |
C7 |
C1 |
N1 |
179.8 |
179.7 |
C2 |
C7 |
C1 |
N2 |
359.6 |
359.7 |
C4 |
C3 |
C2 |
C7 |
0.2 |
0.6 |
C3 |
C2 |
C7 |
N3 |
180.5 |
179.4 |
C7 |
C2 |
C3 |
H3 |
180.2 |
180.3 |
C7 |
C2 |
N3 |
N2 |
0.6 |
359.9 |
C7 |
C2 |
N3 |
HN3 |
180.5 |
180.0 |
C5 |
C6 |
C7 |
C1 |
179.1 |
180.0 |
C5 |
C6 |
C7 |
C2 |
359.7 |
0.3 |
C7 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
BR1 |
180.2 |
180.1 |
C6 |
C5 |
C4 |
C3 |
359.6 |
360.0 |
C6 |
C5 |
C4 |
H4 |
179.7 |
180.0 |
N1 |
C1 |
C7 |
C2 |
179.8 |
179.7 |
C7 |
C1 |
N1 |
N2 |
179.8 |
180.0 |
N1 |
C1 |
N2 |
N3 |
180.6 |
180.2 |
HN1 |
N1 |
C1 |
HN1A |
240.0 |
180.0 |
N2 |
C1 |
C7 |
C2 |
359.6 |
359.7 |
C7 |
C1 |
N2 |
N1 |
180.2 |
180.0 |
N2 |
C1 |
N1 |
HN1 |
256.7 |
180.0 |
N2 |
C1 |
N1 |
HN1A |
16.6 |
0.0 |
C2 |
N3 |
N2 |
C1 |
359.2 |
359.9 |
C1 |
N2 |
N3 |
HN3 |
179.2 |
179.8 |
C6 |
C5 |
C4 |
BR1 |
179.8 |
179.9 |
C4 |
C5 |
C6 |
H6 |
180.5 |
180.1 |
C5 |
C4 |
C3 |
C2 |
0.0 |
359.7 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
H3 |
180.0 |
180.0 |
C6 |
C5 |
BR1 |
C4 |
180.2 |
180.1 |
BR1 |
C5 |
C6 |
H6 |
0.3 |
-0.0 |
BR1 |
C5 |
C4 |
C3 |
179.8 |
180.0 |
BR1 |
C5 |
C4 |
H4 |
359.9 |
0.1 |
C7 |
C2 |
C3 |
C4 |
0.2 |
0.6 |
C3 |
C4 |
C5 |
BR1 |
179.8 |
180.0 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
N3 |
180.8 |
179.8 |
C2 |
C3 |
C4 |
H3 |
180.0 |
179.7 |
C7 |
C2 |
C3 |
N3 |
179.3 |
180.8 |
C2 |
C3 |
C4 |
H4 |
180.0 |
179.7 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.3 |
C3 |
C2 |
N3 |
N2 |
180.0 |
180.6 |
C3 |
C2 |
N3 |
HN3 |
360.0 |
0.8 |
C7 |
C2 |
N3 |
C3 |
180.6 |
179.3 |
C1 |
N2 |
N3 |
C2 |
359.2 |
359.9 |
N3 |
C2 |
C3 |
H3 |
0.8 |
359.5 |
N2 |
N3 |
C2 |
HN3 |
180.0 |
179.9 |
C2 |
N3 |
N2 |
HN3 |
180.0 |
180.1 |
H6 |
C6 |
C7 |
C1 |
359.1 |
359.9 |
H6 |
C6 |
C7 |
C2 |
179.7 |
180.2 |
C7 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
C4 |
180.5 |
180.1 |
H6 |
C6 |
C5 |
BR1 |
0.3 |
360.0 |
HN1 |
N1 |
C1 |
N2 |
256.7 |
180.0 |
C1 |
N1 |
HN1 |
HN1A |
120.0 |
180.0 |
HN1A |
N1 |
C1 |
N2 |
16.6 |
0.0 |
C1 |
N1 |
HN1A |
HN1 |
240.0 |
180.0 |
H4 |
C4 |
C5 |
BR1 |
359.9 |
0.1 |
C5 |
C4 |
H4 |
C3 |
180.0 |
180.0 |
H4 |
C4 |
C3 |
C2 |
180.0 |
179.7 |
H4 |
C4 |
C3 |
H3 |
360.0 |
360.0 |
C4 |
C3 |
H3 |
C2 |
180.0 |
179.7 |
H3 |
C3 |
C4 |
H4 |
360.0 |
360.0 |
H3 |
C3 |
C2 |
N3 |
0.8 |
359.5 |
C2 |
N3 |
HN3 |
N2 |
180.0 |
179.8 |