PDB Chemical Component 5AE

Ideal Model

Chemical Description

Name 4-amino-1-(beta-D-ribofuranosyl)-1,3,5-triazin-2(1H)-one
Synonyms 5-azacytidine
Formula C8 H12 N4 O5
Formal charge 0
Molecular weight 244.205 g/mol
Component type NON-POLYMER

Chemical features

Atom count 29
Chiral atom count 4
Chiral atoms C1' C4' C3' C2'
Bond count 30
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 4-amino-1-(beta-D-ribofuranosyl)-1,3,5-triazin-2(1H)-one
Systematic name (OpenEye OEToolkits) 4-azanyl-1-[(2R,3R,4S,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1,3,5-triazin-2-one

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC(=O)N(C=N1)[C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O
SMILES (CACTVS) NC1=NC(=O)N(C=N1)[CH]2O[CH](CO)[CH](O)[CH]2O
Stereo SMILES (OpenEye) C1=NC(=NC(=O)N1[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O)N
InChI descriptor InChI=1S/C8H12N4O5/c9-7-10-2-12(8(16)11-7)6-5(15)4(14)3(1-13)17-6/h2-6,13-15H,1H2,(H2,9,11,16)/t3-,4-,5-,6-/m1/s1
InChIKey descriptor NMUSYJAQQFHJEW-KVTDHHQDSA-N

Status Information

Last modified 2021-03-01
Created 2014-05-19
Release status REL
Model PDB code 4QD3
Processing site PDBJ