PDB Chemical Component 5AD

Ideal Model

Chemical Description

Name 5'-DEOXYADENOSINE
Formula C10 H13 N5 O3
Formal charge 0
Molecular weight 251.242 g/mol
Component type NON-POLYMER

Chemical features

Atom count 31
Chiral atom count 4
Chiral atoms C1' C2' C3' C4'
Bond count 33
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 5'-deoxyadenosine
Systematic name (OpenEye OEToolkits) (2R,3R,4S,5R)-2-(6-aminopurin-9-yl)-5-methyl-oxolane-3,4-diol

Chemical Descriptors

Stereo SMILES (CACTVS) C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23
SMILES (CACTVS) C[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23
Stereo SMILES (OpenEye) C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O
InChI descriptor InChI=1S/C10H13N5O3/c1-4-6(16)7(17)10(18-4)15-3-14-5-8(11)12-2-13-9(5)15/h2-4,6-7,10,16-17H,1H3,(H2,11,12,13)/t4-,6-,7-,10-/m1/s1
InChIKey descriptor XGYIMTFOTBMPFP-KQYNXXCUSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 4REQ
Processing site PDBJ