PDB Chemical Component 59A

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 59A

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C2	O1	1.431	1.429
C2	C3	1.546	1.530
C2	C7	1.551	1.508
C2	H2	1.100	1.090
O1	C3	2.417	1.431
C3	C4	1.527	1.506
C3	H3	1.100	1.091
C4	O4	1.227	1.212
C4	N1	1.348	1.348
N1	C5	1.520	1.464
N1	HN1	1.000	0.971
C5	C6	1.566	1.507
C5	C10	1.579	1.531
C5	H5	1.100	1.089
C6	O5	1.216	1.342
C6	OA	1.363	1.208
O5	HO5	0.950	0.967
C10	C12	1.567	1.530
C10	C11	1.549	1.530
C10	H10	1.100	1.090
C12	C13	1.543	1.530
C12	H121	1.100	1.090
C12	H122	1.100	1.090
C11	H111	1.100	1.089
C11	H112	1.100	1.090
C11	H113	1.100	1.089
C13	H131	1.100	1.089
C13	H132	1.100	1.090
C13	H133	1.100	1.090
C7	O2	1.225	1.208
C7	O3	1.396	1.342
O3	C8	1.459	1.452
C8	C9	1.538	1.530
C8	H81	1.101	1.090
C8	H82	1.100	1.090
C9	H91	1.100	1.090
C9	H92	1.100	1.090
C9	H93	1.100	1.090

Bond Angles for 59A

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C2	C3	108.5	57.7
O1	C2	C7	110.3	117.7
O1	C2	H2	110.6	117.8
C2	O1	C3	37.3	64.7
C3	C2	C7	112.4	117.7
C3	C2	H2	108.4	117.8
C2	C3	O1	34.2	57.6
C2	C3	C4	114.1	117.9
C2	C3	H3	137.6	117.8
C7	C2	H2	106.5	115.7
C2	C7	O2	121.3	120.0
C2	C7	O3	112.8	120.0
O1	C3	C4	94.1	117.8
O1	C3	H3	156.0	117.7
C4	C3	H3	105.7	115.7
C3	C4	O4	119.5	120.0
C3	C4	N1	115.3	120.0
O4	C4	N1	125.2	120.0
C4	N1	C5	128.8	120.0
C4	N1	HN1	115.6	120.0
C5	N1	HN1	115.6	120.0
N1	C5	C6	110.7	109.5
N1	C5	C10	108.6	109.5
N1	C5	H5	110.1	109.5
C6	C5	C10	111.9	109.5
C6	C5	H5	106.7	109.5
C5	C6	O5	125.5	120.0
C5	C6	OA	112.7	120.0
C10	C5	H5	108.9	109.5
C5	C10	C12	113.6	109.5
C5	C10	C11	111.5	109.5
C5	C10	H10	104.4	109.5
O5	C6	OA	121.8	120.0
C6	O5	HO5	109.5	120.0
C12	C10	C11	107.1	109.4
C12	C10	H10	109.0	109.5
C10	C12	C13	115.1	109.5
C10	C12	H121	106.3	109.5
C10	C12	H122	107.6	109.4
C11	C10	H10	111.3	109.5
C10	C11	H111	109.5	109.5
C10	C11	H112	109.5	109.4
C10	C11	H113	109.5	109.5
C13	C12	H121	106.3	109.5
C13	C12	H122	107.6	109.5
C12	C13	H131	109.4	109.5
C12	C13	H132	109.5	109.5
C12	C13	H133	109.5	109.4
H121	C12	H122	114.0	109.5
H111	C11	H112	109.5	109.5
H111	C11	H113	109.4	109.5
H112	C11	H113	109.5	109.5
H131	C13	H132	109.5	109.5
H131	C13	H133	109.4	109.5
H132	C13	H133	109.5	109.4
O2	C7	O3	125.9	120.0
C7	O3	C8	118.7	120.0
O3	C8	C9	109.1	109.5
O3	C8	H81	109.7	109.5
O3	C8	H82	109.6	109.5
C9	C8	H81	109.7	109.5
C9	C8	H82	109.6	109.5
C8	C9	H91	109.5	109.5
C8	C9	H92	109.5	109.5
C8	C9	H93	109.5	109.5
H81	C8	H82	109.2	109.4
H91	C9	H92	109.5	109.5
H91	C9	H93	109.4	109.4
H92	C9	H93	109.4	109.5

Torsion Angles for 59A

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C3	C2	O1	C7	236.5	253.1
C3	C2	O1	H2	118.8	106.8
O1	C2	C3	O1	-0.0	360.0
O1	C2	C3	C4	301.4	253.2
O1	C2	C3	H3	143.1	106.8
C7	C2	O1	H2	242.4	213.7
O1	C2	C7	O2	116.7	47.6
O1	C2	C7	O3	296.7	227.5
C2	O1	C3	C4	128.7	106.9
C2	O1	C3	H3	274.6	253.1
O1	C2	C3	C7	122.2	106.8
O1	C2	C3	H2	239.8	253.1
C3	C2	O1	C3	-0.0	360.0
C7	C2	C3	H2	117.5	146.2
C3	C2	C7	O2	237.9	113.7
C3	C2	C7	O3	58.0	293.6
O1	C3	C2	C4	58.6	106.8
O1	C3	C2	H3	216.9	253.2
C4	C3	C2	H3	158.3	146.4
C2	C3	C4	O4	286.3	112.3
C2	C3	C4	N1	104.0	292.4
O1	C2	C7	C3	238.8	293.9
O1	C2	C7	H2	120.1	147.0
C7	C2	O1	C3	123.5	106.9
C3	C2	C7	H2	241.3	213.1
C7	C2	C3	O1	237.8	253.2
C7	C2	C3	C4	179.2	146.3
C7	C2	C3	H3	20.9	359.9
O2	C7	C2	O3	179.9	180.1
C2	C7	O3	C8	179.9	180.0
O1	C2	H2	C3	118.9	66.1
O1	C2	H2	C7	240.1	213.0
H2	C2	O1	C3	241.2	253.2
C3	C2	H2	C7	121.2	146.9
H2	C2	C3	O1	120.2	106.9
H2	C2	C3	C4	61.7	0.1
H2	C2	C3	H3	263.4	213.7
H2	C2	C7	O2	356.6	260.6
H2	C2	C7	O3	176.6	80.5
C3	O1	C2	C3	-0.0	-0.0
C3	O1	C2	C7	123.5	106.9
C3	O1	C2	H2	241.2	253.2
O1	C3	C2	C7	237.8	253.2
O1	C3	C2	H2	120.2	106.9
C2	C3	O1	C4	231.3	253.1
C2	C3	O1	H3	85.4	106.9
C4	C3	O1	H3	214.1	213.8
O1	C3	C4	O4	257.6	46.3
O1	C3	C4	N1	75.3	226.4
C4	C3	C2	C7	179.2	146.3
C4	C3	C2	H2	61.7	0.1
C2	C3	C4	O1	28.7	66.0
C2	C3	C4	H3	195.0	212.9
O1	C3	C4	H3	166.3	146.9
O4	C4	C3	N1	182.3	179.9
C3	C4	N1	C5	182.7	180.0
C3	C4	N1	HN1	2.7	360.0
H3	C3	C2	C7	20.9	359.9
H3	C3	C2	H2	263.4	213.7
C2	C3	H3	O1	304.0	294.0
C2	C3	H3	C4	159.5	147.1
O1	C3	H3	C4	215.5	213.1
H3	C3	C4	O4	91.2	259.4
H3	C3	C4	N1	269.0	79.5
O4	C4	C3	H3	91.2	259.4
C3	C4	O4	N1	177.5	180.1
O4	C4	N1	C5	0.3	0.0
O4	C4	N1	HN1	180.3	180.1
N1	C4	C3	H3	269.0	79.5
C3	C4	N1	O4	182.4	179.9
C5	N1	C4	HN1	180.0	180.0
C4	N1	C5	C6	301.8	275.0
C4	N1	C5	C10	178.6	155.0
C4	N1	C5	H5	59.5	35.0
C4	N1	C5	HN1	180.0	180.0
C6	C5	N1	C10	123.2	120.0
C6	C5	N1	H5	242.3	240.0
N1	C5	C6	O5	340.2	180.0
N1	C5	C6	OA	161.1	360.0
C10	C5	N1	H5	119.1	120.0
N1	C5	C10	C12	52.9	185.0
N1	C5	C10	C11	291.8	65.0
N1	C5	C10	H10	171.6	305.1
C4	N1	HN1	C5	180.0	180.0
HN1	N1	C5	C6	121.8	95.0
HN1	N1	C5	C10	358.6	335.0
HN1	N1	C5	H5	239.5	215.0
C6	C5	N1	HN1	121.8	95.0
N1	C5	C6	C10	238.7	240.0
N1	C5	C6	H5	119.8	120.0
C10	C5	C6	H5	241.1	240.0
C6	C5	C10	C12	290.4	65.0
C6	C5	C10	C11	169.3	305.0
C6	C5	C10	H10	49.1	185.0
O5	C6	C5	OA	179.1	180.0
C5	C6	O5	HO5	180.9	180.0
C10	C5	N1	HN1	358.6	335.0
N1	C5	C10	C6	122.5	120.0
N1	C5	C10	H5	240.1	240.0
C6	C5	C10	H5	117.6	120.0
C10	C5	C6	O5	101.5	300.0
C10	C5	C6	OA	282.4	120.0
C12	C10	C5	C11	121.2	120.0
C12	C10	C5	H10	241.4	239.9
C5	C10	C12	C13	131.9	175.0
C5	C10	C12	H121	14.5	295.0
C5	C10	C12	H122	251.9	55.0
C11	C10	C5	H10	120.2	120.0
C5	C10	C11	H111	197.5	180.0
C5	C10	C11	H112	77.5	300.0
C5	C10	C11	H113	317.5	60.0
H5	C5	N1	HN1	239.5	215.0
N1	C5	H5	C6	239.8	240.0
N1	C5	H5	C10	118.9	120.0
C6	C5	H5	C10	239.1	240.0
H5	C5	C6	O5	220.4	60.0
H5	C5	C6	OA	41.3	240.0
H5	C5	C10	C12	172.8	305.0
H5	C5	C10	C11	51.7	185.0
H5	C5	C10	H10	291.4	65.0
O5	C6	C5	C10	101.5	300.0
O5	C6	C5	H5	220.4	60.0
C5	C6	O5	OA	181.0	180.0
OA	C6	C5	C10	282.4	120.0
OA	C6	C5	H5	41.3	240.0
C5	C6	OA	O5	179.2	180.0
OA	C6	O5	HO5	360.0	0.1
HO5	O5	C6	OA	360.0	0.1
C12	C10	C5	H5	172.8	305.0
C5	C10	C12	C11	236.4	240.0
C5	C10	C12	H10	115.9	120.0
C11	C10	C12	H10	239.5	240.0
C12	C10	C11	H111	72.6	60.1
C12	C10	C11	H112	312.6	180.0
C12	C10	C11	H113	192.6	300.0
C13	C12	C10	H121	117.4	239.9
C13	C12	C10	H122	240.0	120.0
C10	C12	C13	H131	24.1	180.0
C10	C12	C13	H132	264.1	300.1
C10	C12	C13	H133	144.1	60.0
H121	C12	C10	H122	122.6	240.0
C11	C10	C5	H5	51.7	185.0
C5	C10	C11	C12	124.9	120.0
C5	C10	C11	H10	243.9	240.0
C12	C10	C11	H10	119.1	120.1
C11	C10	C12	C13	255.5	294.9
C11	C10	C12	H121	138.1	55.0
C11	C10	C12	H122	15.5	175.0
H111	C11	C10	H112	120.0	240.0
H111	C11	C10	H113	240.0	120.0
H112	C11	C10	H113	120.0	240.0
H10	C10	C5	H5	291.4	65.0
C5	C10	H10	C12	238.3	240.0
C5	C10	H10	C11	120.4	120.0
C12	C10	H10	C11	242.1	240.0
H10	C10	C12	C13	16.0	54.9
H10	C10	C12	H121	258.6	175.0
H10	C10	C12	H122	136.0	295.0
H10	C10	C11	H111	313.5	300.0
H10	C10	C11	H112	193.5	59.9
H10	C10	C11	H113	73.5	180.0
C13	C12	C10	C11	255.5	294.9
C13	C12	C10	H10	16.0	54.9
C10	C12	C13	H121	242.5	120.1
C10	C12	C13	H122	120.0	240.1
H121	C12	C13	H122	237.4	120.0
H131	C13	C12	H132	120.0	239.9
H131	C13	C12	H133	240.0	120.0
H132	C13	C12	H133	120.0	240.1
H121	C12	C10	C11	138.1	55.0
H121	C12	C10	H10	258.6	175.0
C10	C12	H121	C13	123.1	240.0
C10	C12	H121	H122	241.6	120.0
C13	C12	H121	H122	118.4	240.0
H121	C12	C13	H131	141.6	59.9
H121	C12	C13	H132	21.6	180.0
H121	C12	C13	H133	261.5	300.0
H122	C12	C10	C11	15.5	175.0
H122	C12	C10	H10	136.0	295.0
C10	C12	H122	C13	235.4	120.0
C10	C12	H122	H121	117.7	240.0
C13	C12	H122	H121	242.3	120.0
H122	C12	C13	H131	264.1	299.9
H122	C12	C13	H132	144.1	60.0
H122	C12	C13	H133	24.1	180.0
H111	C11	C10	H10	313.5	300.0
C10	C11	H111	H112	240.0	119.9
C10	C11	H111	H113	120.0	240.0
H112	C11	H111	H113	240.0	120.0
H112	C11	C10	H10	193.5	59.9
C10	C11	H112	H111	120.0	240.0
C10	C11	H112	H113	240.0	120.0
H111	C11	H112	H113	120.0	240.0
H113	C11	C10	H10	73.5	180.0
C10	C11	H113	H111	240.0	120.0
C10	C11	H113	H112	120.0	240.0
H111	C11	H113	H112	240.0	120.0
H131	C13	C12	H121	141.6	59.9
H131	C13	C12	H122	264.1	299.9
C12	C13	H131	H132	240.0	120.1
C12	C13	H131	H133	120.0	240.0
H132	C13	H131	H133	240.0	120.0
H132	C13	C12	H121	21.6	180.0
H132	C13	C12	H122	144.1	60.0
C12	C13	H132	H131	120.0	239.9
C12	C13	H132	H133	239.9	119.9
H131	C13	H132	H133	120.0	240.0
H133	C13	C12	H121	261.5	300.0
H133	C13	C12	H122	24.1	180.0
C12	C13	H133	H131	240.0	120.0
C12	C13	H133	H132	120.0	240.0
H131	C13	H133	H132	240.0	120.1
O2	C7	C2	H2	356.6	260.6
C2	C7	O2	O3	180.1	179.9
O2	C7	O3	C8	359.9	360.0
O3	C7	C2	H2	176.6	80.5
C2	C7	O3	O2	179.9	180.1
C7	O3	C8	C9	88.9	180.0
C7	O3	C8	H81	328.7	60.0
C7	O3	C8	H82	208.9	300.0
C9	C8	O3	H81	120.2	120.0
C9	C8	O3	H82	240.0	240.0
O3	C8	C9	H91	3.1	180.0
O3	C8	C9	H92	243.0	300.0
O3	C8	C9	H93	123.0	60.0
H81	C8	O3	H82	119.8	120.0
O3	C8	C9	H81	239.8	240.0
O3	C8	C9	H82	120.0	120.0
H81	C8	C9	H82	240.2	240.1
H91	C9	C8	H92	120.0	240.0
H91	C9	C8	H93	240.0	120.0
H92	C9	C8	H93	120.0	240.0
O3	C8	H81	C9	119.8	120.0
O3	C8	H81	H82	239.9	240.0
C9	C8	H81	H82	120.1	120.0
H81	C8	C9	H91	123.2	300.0
H81	C8	C9	H92	3.2	60.0
H81	C8	C9	H93	243.2	180.0
O3	C8	H82	C9	240.3	240.0
O3	C8	H82	H81	120.2	120.0
C9	C8	H82	H81	239.8	240.0
H82	C8	C9	H91	243.1	59.9
H82	C8	C9	H92	123.0	180.0
H82	C8	C9	H93	3.1	300.0
H91	C9	C8	H81	123.2	300.0
H91	C9	C8	H82	243.1	59.9
C8	C9	H91	H92	240.0	120.0
C8	C9	H91	H93	120.0	240.0
H92	C9	H91	H93	240.0	120.0
H92	C9	C8	H81	3.2	60.0
H92	C9	C8	H82	123.0	180.0
C8	C9	H92	H91	120.0	240.0
C8	C9	H92	H93	240.0	120.0
H91	C9	H92	H93	120.0	240.0
H93	C9	C8	H81	243.2	180.0
H93	C9	C8	H82	3.1	300.0
C8	C9	H93	H91	240.0	120.0
C8	C9	H93	H92	120.0	240.0
H91	C9	H93	H92	240.0	120.0