PDB Chemical Component 599

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 599

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C6 C1 1.525 1.532
C1 N2 1.459 1.470
C1 H1 1.100 1.090
C1 H1A 1.100 1.090
N2 C13 1.453 1.469
N2 C3 1.477 1.470
C4 C3 1.525 1.530
C3 H3 1.101 1.090
C3 H3A 1.100 1.090
O5 C4 1.437 1.430
C4 H4 1.100 1.090
C4 H4A 1.100 1.090
C6 O5 1.436 1.431
C6 H6 1.100 1.090
C6 H6A 1.101 1.089
C13 C14 1.514 1.530
C13 H13 1.100 1.090
C13 H13A 1.100 1.090
C14 C15 1.517 1.530
C14 H14 1.100 1.090
C14 H14A 1.100 1.090
N16 C15 1.472 1.465
C15 H15 1.100 1.090
C15 H15A 1.101 1.090
N21 N16 1.388 1.403
N16 C24 1.349 1.345
C22 N21 1.354 1.318
C39 C22 1.477 1.484
C22 C23 1.397 1.403
C23 C33 1.528 1.509
C23 C24 1.399 1.355
C24 C30 1.514 1.508
C30 C31 1.547 1.534
C30 H30 1.100 1.090
C30 H30A 1.099 1.090
N32 C31 1.477 1.470
C31 H31 1.100 1.090
C31 H31A 1.100 1.090
C33 N32 1.482 1.476
N32 C69 1.361 1.348
C33 H33 1.100 1.090
C33 H33A 1.100 1.090
C45 C39 1.396 1.390
C41 C39 1.377 1.395
C42 C41 1.376 1.381
C41 H41 1.080 1.080
C43 C42 1.385 1.381
C42 H42 1.080 1.080
CL81 C43 1.788 1.736
C44 C43 1.388 1.399
C52 C44 1.310 1.432
C44 C45 1.383 1.396
C45 H45 1.080 1.080
C53 C52 1.196 1.174
C54 C53 1.293 1.432
C62 C54 1.399 1.398
C58 C54 1.392 1.397
C59 C58 1.392 1.379
C58 H58 1.080 1.080
C60 C59 1.397 1.385
C59 H59 1.080 1.080
CL83 C60 1.807 1.736
C60 C61 1.400 1.385
C61 C62 1.403 1.379
C61 H61 1.080 1.080
C62 H62 1.080 1.080
O77 C69 1.220 1.213
C69 C70 1.530 1.507
C70 O71 1.451 1.429
C70 H70 1.101 1.090
C70 H70A 1.100 1.090
O71 HO71 0.950 0.967

Bond Angles for 599

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C6 C1 H1 110.5 109.5
C6 C1 H1A 110.5 109.5
N2 C1 H1 110.5 109.5
N2 C1 H1A 110.5 109.6
C1 N2 C13 119.7 111.0
C1 N2 C3 120.9 110.8
H1 C1 H1A 108.4 109.5
C3 N2 C13 119.4 111.0
N2 C13 C14 107.1 109.5
N2 C13 H13 110.3 109.5
N2 C13 H13A 110.3 109.5
N2 C3 H3 109.5 109.6
N2 C3 H3A 109.5 109.5
C4 C3 H3 109.5 109.5
C4 C3 H3A 109.5 109.5
H3 C3 H3A 109.5 109.5
O5 C4 H4 109.0 109.5
O5 C4 H4A 109.0 109.5
H4 C4 H4A 109.9 109.5
H6 C6 H6A 109.3 109.6
C14 C13 H13 110.3 109.5
C14 C13 H13A 110.3 109.5
C13 C14 C15 112.7 109.5
C13 C14 H14 108.4 109.5
C13 C14 H14A 108.4 109.5
H13 C13 H13A 108.6 109.5
C15 C14 H14 108.4 109.5
C15 C14 H14A 108.4 109.4
C14 C15 H15 109.2 109.5
C14 C15 H15A 109.2 109.5
H14 C14 H14A 110.5 109.4
N16 C15 H15 109.2 109.4
N16 C15 H15A 109.2 109.4
H15 C15 H15A 109.7 109.4
N21 N16 C24 110.3 108.1
N16 C24 C23 107.4 107.9
N16 C24 C30 130.6 127.7
C22 C23 C33 131.8 128.0
C22 C23 C24 106.3 108.1
C24 C23 C33 121.9 123.9
C23 C33 N32 105.9 107.2
C23 C33 H33 110.7 109.9
C23 C33 H33A 110.7 109.9
C23 C24 C30 122.0 124.5
C24 C30 C31 111.6 108.8
C24 C30 H30 108.8 109.6
C24 C30 H30A 108.8 109.6
C31 C30 H30 108.8 109.5
C31 C30 H30A 108.8 109.6
C30 C31 H31 109.6 109.6
C30 C31 H31A 109.5 109.5
H30 C30 H30A 110.2 109.7
N32 C31 H31 109.6 109.6
N32 C31 H31A 109.6 109.5
H31 C31 H31A 109.4 109.5
C33 N32 C69 124.8 121.0
N32 C69 C70 120.8 120.0
H33 C33 H33A 108.3 110.0
C42 C41 H41 120.4 119.9
C43 C42 H42 120.1 119.9
C44 C45 H45 120.1 120.1
C59 C58 H58 119.5 120.1
C60 C59 H59 119.9 119.9
C60 C61 C62 120.0 120.1
C60 C61 H61 120.1 119.9
C62 C61 H61 120.0 119.9
C61 C62 H62 119.8 120.1
C69 C70 O71 110.8 109.4
C69 C70 H70 109.0 109.5
C69 C70 H70A 109.0 109.5
O71 C70 H70 109.0 109.5
O71 C70 H70A 109.0 109.5
C70 O71 HO71 109.5 114.0
H70 C70 H70A 109.9 109.4

Torsion Angles for 599

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N2 C1 C6 H1 240.0 119.9
N2 C1 C6 H1A 120.0 240.0
C6 C1 N2 C13 130.4 177.6
H1 C1 C6 H1A 240.0 120.1
C6 C1 N2 H1 120.0 240.1
C6 C1 N2 H1A 240.0 120.0
H1 C1 N2 H1A 120.0 239.9
C3 N2 C1 C13 179.9 123.8
C1 N2 C13 C14 117.4 170.0
C1 N2 C13 H13 237.4 290.0
C1 N2 C13 H13A 357.4 50.0
C1 N2 C3 H3 164.6 178.6
C1 N2 C3 H3A 284.7 298.7
C6 C1 H1 H1A 121.2 239.9
N2 C1 H1 H1A 238.8 120.2
H1 C1 N2 C13 10.3 297.5
H1 C1 N2 C3 190.3 61.3
C6 C1 H1A H1 238.8 120.1
N2 C1 H1A H1 121.2 239.9
H1A C1 N2 C13 250.4 57.6
H1A C1 N2 C3 70.3 181.4
C13 N2 C1 H1 10.3 297.5
C13 N2 C1 H1A 250.4 57.6
C1 N2 C13 C3 179.9 123.7
C13 N2 C3 H3 344.6 302.4
C13 N2 C3 H3A 104.6 62.4
C14 C13 N2 H13 240.0 240.0
C14 C13 N2 H13A 120.0 120.0
N2 C13 C14 C15 164.1 180.0
N2 C13 C14 H14 284.1 300.0
N2 C13 C14 H14A 44.1 60.0
H13 C13 N2 H13A 240.0 240.0
C3 N2 C1 H1 190.3 61.3
C3 N2 C1 H1A 70.3 181.4
C1 N2 C3 C13 180.1 236.2
C3 N2 C13 C14 297.4 46.3
C3 N2 C13 H13 57.5 166.3
C3 N2 C13 H13A 177.4 286.3
C4 C3 N2 H3 240.0 240.0
C4 C3 N2 H3A 120.0 119.9
H3 C3 N2 H3A 240.0 239.9
C4 C3 N2 C13 224.6 182.4
N2 C3 C4 H3 120.0 120.0
N2 C3 C4 H3A 240.0 240.1
H3 C3 C4 H3A 120.0 120.1
H3 C3 N2 C13 344.6 302.4
N2 C3 H3 H3A 120.1 120.1
C4 C3 H3 H3A 239.9 239.9
H3A C3 N2 C13 104.6 62.4
N2 C3 H3A H3 239.9 239.9
C4 C3 H3A H3 120.1 120.1
O5 C4 C3 H3 195.3 183.2
O5 C4 C3 H3A 75.3 63.1
H4 C4 O5 H4A 120.0 120.0
H4 C4 C3 H3 315.4 303.1
H4 C4 C3 H3A 195.3 183.1
O5 C4 H4 H4A 240.6 240.0
H4A C4 C3 H3 75.3 63.2
H4A C4 C3 H3A 315.3 303.2
O5 C4 H4A H4 119.4 120.0
O5 C6 C1 H1 175.6 296.9
O5 C6 C1 H1A 295.6 176.8
C6 O5 C4 H4 299.1 298.7
C6 O5 C4 H4A 179.1 178.7
H6 C6 C1 H1 295.6 56.8
H6 C6 C1 H1A 55.6 296.7
H6A C6 C1 H1 55.6 177.0
H6A C6 C1 H1A 175.6 56.9
N2 C13 C14 H13 120.0 120.0
N2 C13 C14 H13A 240.0 239.9
H13 C13 C14 H13A 120.0 120.0
C15 C14 C13 H14 240.0 239.9
C15 C14 C13 H14A 120.0 120.0
C13 C14 C15 H15 208.5 300.0
C13 C14 C15 H15A 328.5 60.0
H14 C14 C13 H14A 240.0 240.0
N2 C13 H13 C14 241.9 240.0
N2 C13 H13 H13A 121.0 120.0
C14 C13 H13 H13A 239.1 240.0
H13 C13 C14 C15 44.1 60.0
H13 C13 C14 H14 164.1 180.1
H13 C13 C14 H14A 284.1 300.0
N2 C13 H13A C14 118.1 120.0
N2 C13 H13A H13 239.0 240.0
C14 C13 H13A H13 120.9 120.0
H13A C13 C14 C15 284.1 300.0
H13A C13 C14 H14 44.1 60.1
H13A C13 C14 H14A 164.1 180.1
C15 C14 C13 H13 44.1 60.0
C15 C14 C13 H13A 284.1 300.0
C13 C14 C15 H14 120.0 120.1
C13 C14 C15 H14A 240.0 240.0
H14 C14 C15 H14A 120.0 120.0
N16 C15 C14 H15 240.0 240.0
N16 C15 C14 H15A 120.0 120.0
H15 C15 C14 H15A 240.0 240.0
H14 C14 C13 H13 164.1 180.1
H14 C14 C13 H13A 44.1 60.1
C13 C14 H14 C15 237.3 240.0
C13 C14 H14 H14A 118.7 120.0
C15 C14 H14 H14A 241.3 240.0
H14 C14 C15 H15 88.5 179.9
H14 C14 C15 H15A 208.5 299.9
H14A C14 C13 H13 284.1 300.0
H14A C14 C13 H13A 164.1 180.1
C13 C14 H14A C15 122.6 120.0
C13 C14 H14A H14 241.3 240.0
C15 C14 H14A H14 118.7 120.0
H14A C14 C15 H15 328.5 60.0
H14A C14 C15 H15A 88.5 180.0
N16 C15 C14 H14 328.5 60.0
N16 C15 C14 H14A 208.5 300.0
C14 C15 N16 H15 120.0 120.1
C14 C15 N16 H15A 240.0 240.0
H15 C15 N16 H15A 120.0 119.9
H15 C15 C14 H14 88.5 179.9
H15 C15 C14 H14A 328.5 60.0
C14 C15 H15 H15A 119.7 120.0
N16 C15 H15 H15A 240.3 240.1
H15A C15 C14 H14 208.5 299.9
H15A C15 C14 H14A 88.5 180.0
C14 C15 H15A H15 240.3 240.0
N16 C15 H15A H15 119.7 119.9
N21 N16 C15 H15 136.0 150.3
N21 N16 C15 H15A 16.0 30.4
N21 N16 C24 C23 0.4 359.4
N21 N16 C24 C30 181.4 179.3
C24 N16 C15 H15 315.8 329.9
C24 N16 C15 H15A 195.8 210.0
C22 C23 C24 N16 358.8 0.7
N16 C24 C23 C33 181.6 180.6
C23 C24 N16 C30 179.0 180.1
N16 C24 C30 C31 183.7 162.2
N16 C24 C30 H30 303.7 282.0
N16 C24 C30 H30A 63.7 42.3
C22 N21 N16 C24 0.6 0.4
N16 C24 C23 C22 358.8 0.7
C24 C23 C22 C33 183.2 179.9
C22 C23 C33 N32 210.4 168.3
C22 C23 C33 H33 330.3 288.3
C22 C23 C33 H33A 90.4 49.4
C22 C23 C24 C30 177.9 180.7
C22 C23 C33 C24 183.6 179.9
C33 C23 C24 C30 0.7 0.7
C23 C33 N32 C69 113.5 224.4
H33 C33 C23 H33A 240.0 238.8
N16 C24 C23 C30 180.9 179.9
C22 C23 C24 C33 177.2 180.1
C24 C23 C33 N32 26.8 348.3
C24 C23 C33 H33 146.7 108.3
C24 C23 C33 H33A 266.8 229.5
C23 C24 C30 C31 4.8 342.1
C23 C24 C30 H30 124.8 101.9
C23 C24 C30 H30A 244.8 222.2
N16 C24 C30 C23 178.9 180.1
C30 C24 C23 C33 0.7 0.7
C31 C30 C24 H30 240.0 240.3
C31 C30 C24 H30A 120.0 119.9
C24 C30 C31 H31 81.6 165.3
C24 C30 C31 H31A 201.6 285.4
H30 C30 C24 H30A 240.0 239.6
C24 C30 C31 H30 120.0 119.8
C24 C30 C31 H30A 240.0 240.1
H30 C30 C31 H30A 120.0 120.4
N32 C31 C30 H31 240.0 240.0
N32 C31 C30 H31A 120.0 119.9
H31 C31 C30 H31A 240.0 239.9
C24 C30 H30 C31 238.3 240.7
C24 C30 H30 H30A 119.2 120.3
C31 C30 H30 H30A 240.9 239.6
H30 C30 C31 H31 321.6 45.6
H30 C30 C31 H31A 81.6 165.6
C24 C30 H30A C31 121.7 119.4
C24 C30 H30A H30 240.8 239.7
C31 C30 H30A H30 119.1 120.3
H30A C30 C31 H31 201.6 285.2
H30A C30 C31 H31A 321.6 45.3
C23 C33 N32 C31 297.4 44.6
N32 C31 C30 H30 201.6 285.6
N32 C31 C30 H30A 81.6 165.2
C30 C31 N32 H31 120.0 120.0
C30 C31 N32 H31A 240.0 240.1
H31 C31 N32 H31A 120.0 120.1
H31 C31 C30 H30 321.6 45.6
H31 C31 C30 H30A 201.6 285.2
C30 C31 H31 H31A 120.1 120.1
N32 C31 H31 H31A 239.9 239.9
H31A C31 C30 H30 81.6 165.6
H31A C31 C30 H30A 321.6 45.3
C30 C31 H31A H31 239.9 239.9
N32 C31 H31A H31 120.1 120.2
C23 C33 N32 H33 120.0 119.7
C23 C33 N32 H33A 240.0 240.8
C33 N32 C31 H31 311.4 175.4
C33 N32 C31 H31A 191.4 55.3
C33 N32 C69 C70 189.8 180.2
C69 N32 C31 H31 135.3 355.6
C69 N32 C31 H31A 15.3 235.5
N32 C69 C70 O71 152.0 180.0
N32 C69 C70 H70 272.0 300.0
N32 C69 C70 H70A 32.0 60.0
C23 C33 H33 N32 242.9 242.0
C23 C33 H33 H33A 121.5 121.2
H33 C33 N32 C69 353.5 104.7
C23 C33 H33A N32 117.1 117.4
C23 C33 H33A H33 238.5 238.9
H33A C33 N32 C69 233.4 343.6
C43 C42 C41 H41 177.7 180.0
H42 C42 C41 H41 357.7 359.9
CL81 C43 C42 H42 1.7 0.1
C44 C43 C42 H42 181.5 180.0
C52 C44 C45 H45 359.7 359.8
C60 C59 C58 H58 179.1 180.0
H59 C59 C58 H58 359.1 0.1
CL83 C60 C59 H59 359.3 360.0
CL83 C60 C61 H61 1.3 360.0
C61 C60 C59 H59 180.8 179.9
C62 C61 C60 H61 180.0 179.8
C60 C61 C62 H62 179.9 180.0
C60 C61 C62 H61 180.0 180.2
C60 C61 H61 C62 180.0 179.8
H61 C61 C62 H62 359.9 359.8
H62 C62 C61 H61 359.9 359.8
O77 C69 C70 H70 96.6 120.0
O77 C69 C70 H70A 216.6 240.0
O71 C70 C69 H70 240.0 240.0
O71 C70 C69 H70A 120.0 120.0
C69 C70 O71 HO71 10.9 180.0
H70 C70 C69 H70A 240.0 240.0
C69 C70 O71 H70 120.0 120.0
C69 C70 O71 H70A 240.0 240.0
H70 C70 O71 H70A 120.0 120.0
C69 C70 H70 O71 238.9 240.0
C69 C70 H70 H70A 119.4 120.0
O71 C70 H70 H70A 240.5 240.0
H70 C70 O71 HO71 250.9 60.0
C69 C70 H70A O71 121.1 120.0
C69 C70 H70A H70 240.6 240.0
O71 C70 H70A H70 119.5 120.0
H70A C70 O71 HO71 130.9 300.0
HO71 O71 C70 H70 250.9 60.0
HO71 O71 C70 H70A 130.9 300.0