PDB Chemical Component 596

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 596

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.541 1.531
C1 N6 1.467 1.469
C2 N3 1.473 1.470
N3 C4 1.470 1.469
N3 C7 1.491 1.469
C4 C5 1.526 1.531
C5 N6 1.449 1.470
C7 C8 1.535 1.506
C8 C9 1.398 1.390
C8 C13 1.404 1.386
C9 C10 1.393 1.404
C9 O16 1.418 1.351
C10 C11 1.376 1.395
C10 C18 1.484 1.474
C11 C12 1.388 1.366
C12 C13 1.400 1.391
C13 O14 1.377 1.357
O14 C15 1.447 1.429
O16 C17 1.363 1.354
C17 C18 1.466 1.468
C17 C20 1.474 1.360
C18 O19 1.293 1.219
C20 C21 1.482 1.465
C21 N22 1.344 1.318
C21 C25 1.469 1.470
N22 N23 1.400 1.398
N23 C24 1.353 1.373
C24 C25 1.386 1.406
C24 C29 1.390 1.394
C25 C26 1.387 1.395
C26 C27 1.386 1.366
C27 C28 1.400 1.389
C28 C29 1.396 1.376
C1 H1 1.100 1.090
C1 H1A 1.100 1.090
C2 H2 1.100 1.090
C2 H2A 1.100 1.090
C4 H4 1.100 1.090
C4 H4A 1.100 1.090
C5 H5 1.101 1.090
C5 H5A 1.100 1.090
N6 HN6 1.000 1.010
C7 H7 1.100 1.089
C7 H7A 1.100 1.090
C11 H11 1.080 1.080
C12 H12 1.080 1.080
C15 H15 1.100 1.090
C15 H15A 1.100 1.090
C15 H15B 1.100 1.090
C20 H20 1.080 1.080
N23 HN23 1.000 0.970
C26 H26 1.080 1.080
C27 H27 1.080 1.080
C28 H28 1.080 1.080
C29 H29 1.080 1.080

Bond Angles for 596

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 N6 111.7 109.4
C1 C2 N3 111.5 109.4
C2 C1 H1 108.9 109.5
C2 C1 H1A 108.9 109.5
C1 C2 H2 109.0 109.5
C1 C2 H2A 109.0 109.5
C1 N6 C5 116.9 110.9
N6 C1 H1 108.9 109.5
N6 C1 H1A 108.9 109.5
C1 N6 HN6 107.6 111.0
C2 N3 C4 110.5 110.9
C2 N3 C7 111.7 111.0
N3 C2 H2 109.0 109.5
N3 C2 H2A 108.9 109.5
C4 N3 C7 112.0 111.0
N3 C4 C5 110.1 109.4
N3 C4 H4 109.3 109.5
N3 C4 H4A 109.3 109.5
N3 C7 C8 113.3 109.5
N3 C7 H7 108.5 109.5
N3 C7 H7A 108.5 109.4
C4 C5 N6 110.5 109.4
C5 C4 H4 109.3 109.5
C5 C4 H4A 109.3 109.5
C4 C5 H5 109.2 109.5
C4 C5 H5A 109.2 109.5
N6 C5 H5 109.2 109.5
N6 C5 H5A 109.2 109.5
C5 N6 HN6 107.6 111.0
C7 C8 C9 121.0 120.0
C7 C8 C13 122.4 120.1
C8 C7 H7 108.5 109.5
C8 C7 H7A 108.5 109.5
C9 C8 C13 116.5 120.0
C8 C9 C10 121.7 118.9
C8 C9 O16 125.1 131.4
C8 C13 C12 120.6 120.6
C8 C13 O14 120.1 119.7
C10 C9 O16 113.3 109.7
C9 C10 C11 122.0 120.5
C9 C10 C18 102.6 106.3
C9 O16 C17 108.2 111.8
C11 C10 C18 135.3 133.2
C10 C11 C12 116.9 119.9
C10 C11 H11 121.5 120.0
C10 C18 C17 108.4 104.5
C10 C18 O19 128.6 127.7
C11 C12 C13 122.3 120.2
C12 C11 H11 121.6 120.1
C11 C12 H12 118.8 119.9
C12 C13 O14 119.3 119.7
C13 C12 H12 118.9 119.9
C13 O14 C15 123.6 117.0
O14 C15 H15 109.5 109.5
O14 C15 H15A 109.5 109.5
O14 C15 H15B 109.5 109.4
O16 C17 C18 107.5 107.6
O16 C17 C20 125.1 126.2
C18 C17 C20 127.4 126.2
C17 C18 O19 122.9 127.7
C17 C20 C21 130.5 120.0
C17 C20 H20 114.8 120.0
C20 C21 N22 118.3 126.3
C20 C21 C25 131.0 126.3
C21 C20 H20 114.7 120.0
N22 C21 C25 110.6 107.5
C21 N22 N23 105.5 109.8
C21 C25 C24 103.5 106.3
C21 C25 C26 133.6 133.9
N22 N23 C24 111.0 109.4
N22 N23 HN23 124.5 125.4
N23 C24 C25 109.4 107.0
N23 C24 C29 131.4 133.6
C24 N23 HN23 124.5 125.2
C25 C24 C29 119.1 119.4
C24 C25 C26 122.8 119.8
C24 C29 C28 118.9 119.8
C24 C29 H29 120.5 120.1
C25 C26 C27 117.9 119.8
C25 C26 H26 121.0 120.1
C26 C27 C28 120.2 120.6
C27 C26 H26 121.1 120.1
C26 C27 H27 119.9 119.7
C27 C28 C29 121.0 120.6
C28 C27 H27 119.9 119.7
C27 C28 H28 119.5 119.7
C29 C28 H28 119.5 119.7
C28 C29 H29 120.5 120.1
H1 C1 H1A 109.5 109.5
H2 C2 H2A 109.5 109.5
H4 C4 H4A 109.5 109.5
H5 C5 H5A 109.4 109.5
H7 C7 H7A 109.5 109.5
H15 C15 H15A 109.5 109.5
H15 C15 H15B 109.5 109.4
H15A C15 H15B 109.5 109.5

Torsion Angles for 596

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 N6 C5 314.5 300.7
N6 C1 C2 H1 239.7 240.0
N6 C1 C2 H1A 120.3 120.0
C2 C1 N6 HN6 75.6 64.5
C1 C2 N3 C4 302.6 300.7
C1 C2 N3 C7 177.3 176.8
N3 C2 C1 H2 239.7 240.0
N3 C2 C1 H2A 120.3 120.0
H1 C1 C2 H1A 240.7 239.9
H2 C2 C1 H2A 240.6 239.9
N6 C1 C2 N3 47.9 58.4
C2 C1 N6 H1 120.3 120.0
C2 C1 N6 H1A 239.6 240.0
N6 C1 C2 H2 168.3 178.4
N6 C1 C2 H2A 287.6 298.4
C4 C5 N6 C1 49.5 59.3
C1 N6 C5 H5 289.4 299.4
C1 N6 C5 H5A 169.7 179.3
C5 N6 C1 HN6 238.9 236.1
H1 C1 N6 H1A 119.3 120.0
N3 C2 C1 N6 47.9 58.4
N3 C2 C1 H1 168.2 178.4
N3 C2 C1 H1A 287.6 298.4
C1 C2 N3 H2 120.3 119.9
C1 C2 N3 H2A 239.7 240.0
C4 N3 C2 C7 125.4 123.9
C2 N3 C4 C5 61.5 59.3
C2 N3 C4 H4 181.6 179.3
C2 N3 C4 H4A 301.4 299.3
C2 N3 C7 C8 66.2 190.0
C2 N3 C7 H7 186.8 310.1
C2 N3 C7 H7A 305.6 70.0
H2 C2 N3 H2A 119.4 120.1
C2 N3 C4 C7 234.8 236.1
C4 N3 C2 H2 182.3 180.7
C4 N3 C2 H2A 62.9 60.7
C4 N3 C7 C8 301.6 66.2
C4 N3 C7 H7 62.2 186.2
C4 N3 C7 H7A 181.1 306.2
N3 C4 C5 N6 303.7 301.6
C5 C4 N3 H4 239.9 240.0
C5 C4 N3 H4A 120.1 120.0
N3 C4 C5 H5 63.9 61.6
N3 C4 C5 H5A 183.6 181.6
H4 C4 N3 H4A 240.2 240.0
C2 N3 C7 C4 124.5 123.8
C7 N3 C2 H2 56.9 56.8
C7 N3 C2 H2A 297.6 296.7
C7 N3 C4 C5 186.8 183.2
C7 N3 C4 H4 306.9 303.2
C7 N3 C4 H4A 66.7 63.2
N3 C7 C8 C9 96.0 90.0
N3 C7 C8 C13 276.7 269.8
C8 C7 N3 H7 239.4 239.9
C8 C7 N3 H7A 120.6 120.0
H7 C7 N3 H7A 241.2 240.0
C1 N6 C5 C4 49.5 59.3
C5 C4 N3 C7 186.8 183.2
N3 C4 C5 H4 120.1 120.0
N3 C4 C5 H4A 239.9 240.0
N6 C5 C4 H5 239.8 240.0
N6 C5 C4 H5A 120.2 120.0
C4 C5 N6 HN6 288.5 295.4
H4 C4 C5 H4A 119.8 120.1
H5 C5 C4 H5A 240.3 240.0
C5 N6 C1 H1 194.2 180.7
C5 N6 C1 H1A 74.9 60.7
C1 N6 C5 HN6 121.1 123.9
N6 C5 C4 H4 183.6 181.6
N6 C5 C4 H4A 63.8 61.6
C4 C5 N6 H5 120.2 120.0
C4 C5 N6 H5A 239.8 240.1
H5 C5 N6 H5A 119.7 120.1
N3 C7 C8 H7 120.6 120.1
N3 C7 C8 H7A 239.4 240.1
C9 C8 C7 C13 179.3 180.3
C7 C8 C9 C10 181.4 180.0
C7 C8 C9 O16 0.4 0.0
C7 C8 C13 C12 178.7 179.8
C7 C8 C13 O14 359.1 360.0
H7 C7 C8 H7A 118.9 120.0
C7 C8 C9 C13 180.6 179.7
C9 C8 C7 H7 335.5 330.0
C9 C8 C7 H7A 216.6 209.9
C9 C8 C13 C12 359.4 359.5
C9 C8 C13 O14 179.8 179.7
C10 C9 C8 O16 181.0 180.0
C8 C9 C10 C11 358.8 360.0
C8 C9 C10 C18 180.0 180.0
C8 C9 O16 C17 179.8 180.0
C7 C8 C13 C9 179.3 180.3
C13 C8 C7 H7 156.2 149.7
C13 C8 C7 H7A 37.3 29.7
C13 C8 C9 C10 0.8 0.3
C13 C8 C9 O16 179.7 180.3
C11 C12 C13 C8 0.9 0.5
C12 C13 C8 O14 179.6 179.8
C8 C13 C12 H12 180.9 180.3
C8 C13 O14 C15 172.2 180.0
C10 C9 C8 C13 0.8 0.3
C8 C9 C10 O16 179.1 180.0
C10 C9 O16 C17 358.9 0.0
C11 C10 C9 C18 178.8 180.0
C9 C10 C11 C12 1.3 0.0
C9 C10 C11 H11 181.3 180.0
C9 C10 C18 C17 359.6 0.0
C9 C10 C18 O19 179.7 180.0
O16 C9 C8 C13 179.7 180.3
C8 C9 O16 C10 181.0 180.0
O16 C9 C10 C11 179.8 179.9
O16 C9 C10 C18 0.9 360.0
C9 O16 C17 C18 0.8 0.0
C9 O16 C17 C20 180.5 180.0
C11 C10 C9 O16 179.8 179.9
C9 C10 C11 C18 181.6 180.0
C11 C10 C18 C17 181.0 180.1
C11 C10 C18 O19 1.1 360.0
C10 C11 C12 C13 358.8 359.8
C12 C11 C10 H11 180.0 180.0
C10 C11 C12 H12 178.8 179.9
C18 C10 C9 O16 0.9 360.0
C9 C10 C18 C11 178.6 180.0
C18 C10 C11 C12 179.7 180.0
C18 C10 C11 H11 359.7 359.9
O16 C17 C18 C10 359.8 360.0
C10 C18 C17 C20 180.0 180.0
C17 C18 C10 O19 179.9 180.1
C8 C13 C12 C11 0.9 0.5
C12 C11 C10 C18 179.7 180.0
C10 C11 C12 H11 180.0 180.0
C11 C12 C13 O14 180.5 180.3
C13 C12 C11 H12 180.0 179.8
C8 C13 C12 O14 180.4 180.2
C13 C12 C11 H11 178.8 179.8
C11 C12 C13 H12 180.0 180.2
C12 C13 O14 C15 352.6 0.1
C8 C13 O14 C12 179.6 179.8
O14 C13 C12 H12 0.5 0.1
C13 O14 C15 H15 180.0 180.0
C13 O14 C15 H15A 300.0 300.1
C13 O14 C15 H15B 60.0 60.1
H15 C15 O14 H15A 240.0 240.0
H15 C15 O14 H15B 120.0 120.0
H15A C15 O14 H15B 240.0 240.0
C10 C18 C17 O16 359.8 360.0
C18 C17 O16 C20 180.3 180.0
O16 C17 C18 O19 179.7 180.0
O16 C17 C20 C21 359.7 0.0
O16 C17 C20 H20 179.7 180.1
C10 C18 C17 O19 180.1 179.9
O16 C17 C18 C20 179.7 180.0
C18 C17 C20 C21 179.4 180.0
C18 C17 C20 H20 359.4 0.0
O16 C17 C20 C18 180.3 180.0
C20 C17 C18 O19 360.0 0.1
C17 C20 C21 N22 173.9 0.0
C17 C20 C21 C25 354.2 179.7
C21 C20 C17 H20 180.0 180.0
C10 C18 O19 C17 179.9 180.1
O19 C18 C17 C20 360.0 0.1
C17 C20 C21 H20 180.0 180.0
N22 C21 C20 C25 179.7 180.3
C20 C21 N22 N23 179.1 180.0
C20 C21 C25 C24 180.6 179.9
C20 C21 C25 C26 358.6 360.0
C20 C21 N22 C25 180.3 179.7
N22 C21 C20 H20 353.9 180.0
N22 C21 C25 C24 0.9 359.6
N22 C21 C25 C26 179.0 179.7
C21 N22 N23 C24 1.0 0.0
C21 N22 N23 HN23 181.0 180.0
C20 C21 C25 N22 179.7 180.3
C25 C21 C20 H20 174.2 359.7
C25 C21 N22 N23 358.8 0.2
N23 C24 C25 C21 359.8 0.4
C21 C25 C24 C29 179.2 180.2
C24 C25 C21 C26 181.9 179.9
C21 C25 C26 C27 181.3 180.0
C21 C25 C26 H26 1.3 0.0
N23 N22 C21 C25 358.8 0.2
N22 N23 C24 C25 359.5 359.7
N22 N23 C24 C29 180.2 180.0
C24 N23 N22 HN23 180.0 180.0
C21 C25 C24 N23 359.8 0.4
N22 N23 C24 HN23 180.0 180.0
C25 C24 N23 C29 179.3 179.7
N23 C24 C25 C26 181.4 180.3
N23 C24 C29 C28 178.8 179.2
N23 C24 C29 H29 358.9 359.9
C21 C25 C24 C26 178.3 180.1
N23 C24 C25 C29 180.6 180.3
C25 C24 N23 HN23 179.5 179.7
C25 C24 C29 C28 359.6 359.5
C25 C24 C29 H29 179.6 180.3
C24 C25 C26 C27 359.1 0.2
C24 C25 C26 H26 179.1 180.1
N23 C24 C29 C25 179.3 179.7
C29 C24 N23 HN23 0.2 0.0
C29 C24 C25 C26 0.8 0.1
C27 C28 C29 C24 0.1 0.6
C24 C29 C28 H28 180.1 180.3
C28 C29 C24 H29 180.0 179.3
C21 C25 C26 C24 182.2 179.9
C26 C25 C24 C29 0.8 0.1
C25 C26 C27 C28 0.6 0.0
C27 C26 C25 H26 180.0 180.0
C25 C26 C27 H27 180.6 180.0
C25 C26 C27 H26 180.0 180.0
C26 C27 C28 C29 359.8 359.6
C28 C27 C26 H27 180.0 180.0
C26 C27 C28 H28 179.8 179.9
C24 C29 C28 C27 0.1 0.6
C28 C27 C26 H26 180.6 180.0
C26 C27 C28 H27 180.0 180.0
C29 C28 C27 H28 180.0 179.7
C27 C28 C29 H29 180.1 179.9
C24 C29 C28 H29 180.0 180.7
C29 C28 C27 H27 179.8 179.6
C27 C28 C29 H28 180.0 180.3
C2 C1 H1 N6 238.0 240.1
H1 C1 C2 N3 168.2 178.4
C2 C1 H1 H1A 119.0 120.1
H1 C1 C2 H2 288.6 298.3
H1 C1 C2 H2A 47.9 58.4
H1 C1 N6 C5 194.2 180.7
N6 C1 H1 H1A 241.0 240.0
H1 C1 N6 HN6 315.2 304.6
C2 C1 H1A N6 122.0 119.9
H1A C1 C2 N3 287.6 298.4
C2 C1 H1A H1 241.0 239.9
H1A C1 C2 H2 47.9 58.4
H1A C1 C2 H2A 167.3 178.5
H1A C1 N6 C5 74.9 60.7
N6 C1 H1A H1 119.0 120.0
H1A C1 N6 HN6 195.9 184.5
H2 C2 C1 N6 168.3 178.4
C1 C2 H2 N3 238.1 240.1
H2 C2 C1 H1 288.6 298.3
H2 C2 C1 H1A 47.9 58.4
C1 C2 H2 H2A 119.1 120.0
H2 C2 N3 C4 182.3 180.7
H2 C2 N3 C7 56.9 56.8
N3 C2 H2 H2A 241.0 239.9
H2A C2 C1 N6 287.6 298.4
C1 C2 H2A N3 121.9 119.9
H2A C2 C1 H1 47.9 58.4
H2A C2 C1 H1A 167.3 178.5
C1 C2 H2A H2 240.9 240.0
H2A C2 N3 C4 62.9 60.7
H2A C2 N3 C7 297.6 296.7
N3 C2 H2A H2 119.1 120.1
H4 C4 N3 C7 306.9 303.2
N3 C4 H4 C5 239.4 240.1
N3 C4 H4 H4A 119.7 120.0
H4 C4 C5 N6 183.6 181.6
C5 C4 H4 H4A 240.3 239.9
H4 C4 C5 H5 303.8 301.6
H4 C4 C5 H5A 63.5 61.7
H4A C4 N3 C7 66.7 63.2
N3 C4 H4A C5 120.6 119.9
N3 C4 H4A H4 240.3 240.0
H4A C4 C5 N6 63.8 61.6
C5 C4 H4A H4 119.7 120.1
H4A C4 C5 H5 184.0 181.6
H4A C4 C5 H5A 303.6 301.6
C4 C5 H5 N6 239.1 240.1
H5 C5 C4 H4 303.8 301.6
H5 C5 C4 H4A 184.0 181.6
C4 C5 H5 H5A 119.6 120.0
N6 C5 H5 H5A 240.5 239.9
H5 C5 N6 HN6 168.3 175.5
C4 C5 H5A N6 120.9 119.9
H5A C5 C4 H4 63.5 61.7
H5A C5 C4 H4A 303.6 301.6
C4 C5 H5A H5 240.5 240.0
N6 C5 H5A H5 119.5 120.1
H5A C5 N6 HN6 48.7 55.4
C1 N6 HN6 C5 233.2 236.2
HN6 N6 C1 H1 315.2 304.6
HN6 N6 C1 H1A 195.9 184.5
HN6 N6 C5 H5 168.3 175.5
HN6 N6 C5 H5A 48.7 55.4
N3 C7 H7 C8 236.5 240.0
N3 C7 H7 H7A 118.2 119.9
H7 C7 C8 C9 335.5 330.0
H7 C7 C8 C13 156.2 149.7
C8 C7 H7 H7A 241.7 240.0
N3 C7 H7A C8 123.5 120.0
N3 C7 H7A H7 241.8 240.0
H7A C7 C8 C9 216.6 209.9
H7A C7 C8 C13 37.3 29.7
C8 C7 H7A H7 118.3 120.1
H11 C11 C10 C18 359.7 359.9
C10 C11 H11 C12 180.0 180.0
H11 C11 C12 C13 178.8 179.8
H11 C11 C12 H12 358.8 360.0
C11 C12 H12 C13 180.0 179.8
H12 C12 C11 H11 358.8 360.0
H12 C12 C13 O14 0.5 0.1
O14 C15 H15 H15A 120.0 120.0
O14 C15 H15 H15B 240.0 240.0
H15A C15 H15 H15B 120.0 120.0
O14 C15 H15A H15 240.0 240.0
O14 C15 H15A H15B 120.0 120.0
H15 C15 H15A H15B 240.0 240.0
O14 C15 H15B H15 120.0 120.0
O14 C15 H15B H15A 240.0 240.0
H15 C15 H15B H15A 120.0 120.0
C17 C20 H20 C21 180.0 180.0
H20 C20 C21 N22 353.9 180.0
H20 C20 C21 C25 174.2 359.7
N22 N23 HN23 C24 180.0 180.0
HN23 N23 C24 C25 179.5 179.7
HN23 N23 C24 C29 0.2 0.0
C25 C26 H26 C27 180.0 180.0
H26 C26 C27 C28 180.6 180.0
H26 C26 C27 H27 0.6 0.1
C26 C27 H27 C28 180.0 180.0
H27 C27 C26 H26 0.6 0.1
H27 C27 C28 C29 179.8 179.6
H27 C27 C28 H28 359.8 359.9
C27 C28 H28 C29 180.0 179.7
H28 C28 C27 H27 359.8 359.9
H28 C28 C29 H29 0.1 359.6
C24 C29 H29 C28 180.0 179.3
H29 C29 C28 H28 0.1 359.6