PDB Chemical Component 56M

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 56M

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C26	C5	1.509	1.507
C23	C22	1.512	1.530
O19	S18	1.436	1.421
C5	N6	1.341	1.342
C5	C4	1.478	1.385
N6	C7	1.335	1.378
C22	N21	1.462	1.465
O9	C8	1.222	1.216
O28	C27	1.229	1.214
C4	C27	1.498	1.466
C4	C3	1.387	1.415
C7	C8	1.492	1.468
C7	C3	1.500	1.363
C27	C29	1.499	1.507
N21	S18	1.534	1.657
N21	C24	1.463	1.465
S18	O20	1.439	1.420
S18	C13	1.619	1.762
C8	N10	1.332	1.348
C3	C2	1.512	1.507
C12	C13	1.411	1.382
C12	C11	1.401	1.387
C24	C25	1.505	1.530
C13	C14	1.396	1.382
N10	C11	1.362	1.401
C11	C16	1.391	1.393
C14	C15	1.392	1.382
C16	C15	1.394	1.386
C16	O17	1.360	1.359
C12	H1	1.080	1.080
C14	H2	1.081	1.080
C15	H3	1.079	1.080
C26	H4	1.100	1.090
C26	H5	1.101	1.090
C26	H6	1.100	1.091
C29	H7	1.100	1.090
C29	H8	1.100	1.090
C29	H9	1.100	1.090
C23	H10	1.100	1.090
C23	H11	1.100	1.089
C23	H12	1.099	1.090
C25	H13	1.100	1.090
C25	H14	1.100	1.089
C25	H15	1.100	1.090
C2	H16	1.100	1.091
C2	H17	1.100	1.090
C2	H18	1.100	1.090
C22	H19	1.100	1.089
C22	H20	1.099	1.090
C24	H21	1.100	1.090
C24	H22	1.100	1.090
N6	H23	0.999	0.969
N10	H24	1.000	0.970
O17	H25	0.950	0.967

Bond Angles for 56M

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C26	C5	N6	123.9	125.8
C23	C22	N21	108.4	109.5
C22	C23	H10	109.5	109.5
C22	C23	H11	109.5	109.5
C22	C23	H12	109.5	109.5
C23	C22	H19	109.8	109.5
C23	C22	H20	109.7	109.5
N21	S18	O19	110.6	106.4
O19	S18	O20	109.7	123.2
C5	N6	H23	124.6	125.3
C5	C4	C27	122.8	126.5
C22	N21	S18	120.6	120.0
C22	N21	C24	119.8	120.0
N21	C22	H19	109.7	109.5
N21	C22	H20	109.7	109.5
C3	C4	C27	128.8	126.5
C4	C27	C29	117.4	120.0
C4	C3	C2	127.8	126.5
C7	C8	N10	121.4	120.0
C7	C3	C2	128.7	126.5
C27	C29	H7	109.5	109.5
C27	C29	H8	109.5	109.4
C27	C29	H9	109.5	109.5
N21	S18	O20	108.3	106.4
N21	C24	H21	109.2	109.5
N21	C24	H22	109.2	109.5
C8	N10	H24	116.8	120.0
C3	C2	H16	109.5	109.5
C3	C2	H17	109.5	109.5
C3	C2	H18	109.5	109.5
C12	C13	C14	119.2	120.2
C13	C12	H1	119.9	120.0
C12	C11	C16	119.1	119.8
C24	C25	H13	109.5	109.5
C24	C25	H14	109.4	109.5
C24	C25	H15	109.4	109.4
C13	C14	C15	120.8	120.2
C13	C14	H2	119.6	119.9
C11	C16	C15	121.3	119.8
C11	C16	O17	118.6	120.1
C15	C14	H2	119.6	119.9
C14	C15	H3	120.3	120.1
C16	C15	H3	120.3	119.9
C16	O17	H25	109.5	114.0
H4	C26	H5	109.5	109.5
H4	C26	H6	109.5	109.5
H5	C26	H6	109.5	109.5
H7	C29	H8	109.5	109.5
H7	C29	H9	109.5	109.5
H8	C29	H9	109.5	109.5
H10	C23	H11	109.5	109.5
H10	C23	H12	109.5	109.4
H11	C23	H12	109.5	109.5
H13	C25	H14	109.5	109.5
H13	C25	H15	109.5	109.5
H14	C25	H15	109.5	109.4
H16	C2	H17	109.4	109.5
H16	C2	H18	109.4	109.4
H17	C2	H18	109.5	109.5
H19	C22	H20	109.5	109.5
H21	C24	H22	109.5	109.5

Torsion Angles for 56M

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C26	C5	N6	H23	0.1	359.6
C23	C22	N21	S18	233.1	95.0
C23	C22	N21	C24	52.2	275.0
N21	C22	C23	H19	240.2	240.0
N21	C22	C23	H20	119.9	120.0
H10	C23	C22	H11	240.0	240.0
H10	C23	C22	H12	120.0	120.0
H11	C23	C22	H12	240.0	240.0
H19	C22	C23	H20	239.7	240.0
C22	N21	S18	O19	43.5	336.5
N21	S18	O19	O20	119.4	237.0
N6	C5	C4	C27	181.5	179.9
C3	C4	C5	C27	178.4	179.8
C5	C4	C27	C29	162.5	94.7
C5	C4	C3	C2	180.2	180.2
N6	C7	C8	N10	156.5	0.0
N21	C22	C23	H10	180.0	60.0
N21	C22	C23	H11	300.0	180.0
N21	C22	C23	H12	60.0	300.0
C23	C22	N21	H19	119.9	120.0
C23	C22	N21	H20	240.2	240.0
C22	N21	S18	O20	163.7	203.5
C22	N21	C24	H21	202.5	325.0
C22	N21	C24	H22	322.2	205.0
H19	C22	N21	H20	120.3	120.0
O9	C8	N10	H24	167.4	185.5
O28	C27	C29	H7	360.0	265.0
O28	C27	C29	H8	120.0	25.0
O28	C27	C29	H9	240.0	145.0
C27	C4	C3	C2	358.4	360.0
C4	C27	C29	H7	182.0	85.0
C4	C27	C29	H8	302.0	205.0
C4	C27	C29	H9	62.0	324.9
C5	C4	C3	C27	181.8	180.2
C3	C4	C27	C29	344.5	275.0
C7	C3	C4	C2	179.9	180.0
C4	C3	C2	H16	90.0	90.0
C4	C3	C2	H17	209.9	210.0
C4	C3	C2	H18	330.0	330.0
C8	C7	C3	C2	359.5	0.1
C7	C8	N10	H24	348.5	5.6
C7	C3	C4	C27	178.3	180.0
C4	C3	C7	C2	180.1	180.0
C7	C3	C2	H16	270.1	270.0
C7	C3	C2	H17	30.0	30.0
C7	C3	C2	H18	150.1	150.0
H7	C29	C27	H8	240.0	240.0
H7	C29	C27	H9	120.0	120.0
H8	C29	C27	H9	240.0	240.0
O19	S18	N21	O20	239.8	133.0
C22	N21	S18	C24	179.1	180.0
S18	N21	C22	H19	113.2	335.0
S18	N21	C22	H20	352.9	215.0
S18	N21	C24	H21	21.6	145.0
S18	N21	C24	H22	141.3	25.0
C22	N21	C24	S18	180.9	180.0
C24	N21	C22	H19	292.4	155.0
C24	N21	C22	H20	172.0	35.0
N21	C24	C25	H13	180.0	300.0
N21	C24	C25	H14	300.0	60.1
N21	C24	C25	H15	60.0	180.0
H21	C24	N21	H22	240.3	120.0
N21	S18	O20	O19	239.2	123.0
S18	C13	C12	H1	358.8	360.0
S18	C13	C14	H2	0.6	360.0
C2	C3	C4	C27	358.4	360.0
H16	C2	C3	H17	240.0	240.0
H16	C2	C3	H18	120.0	120.0
H17	C2	C3	H18	239.9	240.0
C13	C12	C11	C16	0.7	0.1
C12	C13	C14	C15	0.1	0.0
C12	C13	C14	H2	180.1	180.0
C12	C11	C16	C15	359.8	359.9
C12	C11	C16	O17	180.1	180.0
H13	C25	C24	H14	240.0	239.9
H13	C25	C24	H15	120.0	120.0
H14	C25	C24	H15	240.0	240.1
C14	C13	C12	H1	179.3	180.0
C15	C14	C13	H2	180.0	180.1
C13	C14	C15	H3	180.4	179.9
N10	C11	C16	O17	0.4	0.3
C11	C16	C15	H3	179.7	180.1
C11	C16	O17	H25	180.0	89.9
C13	C14	C15	H2	180.0	179.9
C11	C16	C15	C14	359.7	0.0
C16	C15	C14	H3	180.0	180.1
C11	C16	C15	O17	180.3	180.0
C16	C15	C14	H2	180.4	180.0
C14	C15	C16	H3	180.0	179.9
C11	C16	O17	C15	179.7	180.0
O17	C16	C15	H3	359.3	0.1
H1	C12	C13	C14	179.3	180.0
H1	C12	C11	C16	180.7	180.0
C13	C14	H2	C15	180.0	180.1
H2	C14	C15	H3	0.4	359.9
H3	C15	C14	H2	0.4	359.9
H4	C26	C5	N6	90.0	95.0
H5	C26	H4	H6	120.0	120.0
H5	C26	C5	N6	210.1	215.0
H4	C26	H5	H6	240.0	240.0
H6	C26	C5	N6	330.0	335.0
H4	C26	H6	H5	120.0	120.0
C27	C29	H7	H8	120.0	120.0
C27	C29	H7	H9	240.0	240.0
H8	C29	H7	H9	120.0	120.0
C27	C29	H8	H7	239.9	240.0
C27	C29	H8	H9	120.0	120.0
H7	C29	H8	H9	240.0	240.0
C27	C29	H9	H7	120.0	120.0
C27	C29	H9	H8	240.0	240.1
H7	C29	H9	H8	120.0	120.0
H10	C23	C22	N21	180.0	60.0
C22	C23	H10	H11	120.0	120.0
C22	C23	H10	H12	240.0	240.0
H10	C23	C22	H19	299.8	180.0
H10	C23	C22	H20	60.1	300.0
H11	C23	H10	H12	120.0	120.0
H11	C23	C22	N21	300.0	180.0
C22	C23	H11	H10	240.0	240.0
C22	C23	H11	H12	120.0	120.0
H11	C23	C22	H19	59.8	300.0
H11	C23	C22	H20	180.2	60.0
H10	C23	H11	H12	240.0	240.0
H12	C23	C22	N21	60.0	300.0
C22	C23	H12	H10	120.0	120.0
C22	C23	H12	H11	240.0	240.0
H12	C23	C22	H19	179.8	60.0
H12	C23	C22	H20	300.1	180.0
H10	C23	H12	H11	120.0	120.0
C24	C25	H13	H14	120.0	120.0
C24	C25	H13	H15	240.0	240.0
H14	C25	H13	H15	120.0	120.0
C24	C25	H14	H13	240.0	239.9
C24	C25	H14	H15	120.0	119.9
H13	C25	H14	H15	240.0	240.0
C24	C25	H15	H13	120.0	120.0
C24	C25	H15	H14	240.0	240.1
H13	C25	H15	H14	120.0	120.0
C3	C2	H16	H17	120.0	120.0
C3	C2	H16	H18	240.0	240.0
H17	C2	H16	H18	120.0	120.0
C3	C2	H17	H16	240.0	240.0
C3	C2	H17	H18	120.0	120.1
H16	C2	H17	H18	240.0	240.1
C3	C2	H18	H16	120.0	120.0
C3	C2	H18	H17	240.0	239.9
H16	C2	H18	H17	119.9	119.9
C23	C22	H19	N21	241.0	240.0
H19	C22	C23	H10	299.8	180.0
H19	C22	C23	H11	59.8	300.0
H19	C22	C23	H12	179.8	60.0
C23	C22	H19	H20	120.5	120.0
H19	C22	N21	S18	113.2	335.0
H19	C22	N21	C24	292.4	155.0
N21	C22	H19	H20	239.5	240.0
C23	C22	H20	N21	119.0	120.0
H20	C22	C23	H10	60.1	300.0
H20	C22	C23	H11	180.2	60.0
H20	C22	C23	H12	300.1	180.0
C23	C22	H20	H19	239.5	240.0
H20	C22	N21	S18	352.9	215.0
H20	C22	N21	C24	172.0	35.0
N21	C22	H20	H19	120.5	120.0
N21	C24	H21	H22	119.6	240.0
H21	C24	C25	H13	59.8	60.0
H21	C24	C25	H14	179.8	180.1
H21	C24	C25	H15	299.8	300.0
N21	C24	H22	H21	240.4	120.0
H22	C24	C25	H13	300.1	180.0
H22	C24	C25	H14	60.1	300.1
H22	C24	C25	H15	180.1	60.0