PDB Chemical Component 569
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 569
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
C1 |
1.455 |
1.465 |
| C1 |
H1 |
1.100 |
1.089 |
| C1 |
H1A |
1.100 |
1.090 |
| C1 |
H1B |
1.100 |
1.091 |
| F1 |
C11 |
1.349 |
1.399 |
| C4 |
N1 |
1.360 |
1.373 |
| N1 |
C2 |
1.368 |
1.350 |
| C2 |
O1 |
1.224 |
1.212 |
| C3 |
C2 |
1.534 |
1.516 |
| C11 |
F2 |
1.353 |
1.399 |
| N2 |
C4 |
1.302 |
1.297 |
| N2 |
C3 |
1.498 |
1.471 |
| C8 |
O2 |
1.368 |
1.359 |
| O2 |
C11 |
1.419 |
1.429 |
| C12 |
C3 |
1.531 |
1.507 |
| C3 |
C5 |
1.538 |
1.507 |
| F3 |
C11 |
1.350 |
1.399 |
| N3 |
C4 |
1.368 |
1.374 |
| N3 |
HN3 |
1.000 |
0.970 |
| N3 |
HN3A |
1.000 |
0.970 |
| F4 |
C15 |
1.338 |
1.352 |
| N4 |
C19 |
1.351 |
1.322 |
| N4 |
C20 |
1.343 |
1.318 |
| C6 |
C5 |
1.402 |
1.382 |
| C5 |
C10 |
1.407 |
1.382 |
| C20 |
N5 |
1.344 |
1.318 |
| N5 |
C21 |
1.352 |
1.322 |
| C6 |
C7 |
1.397 |
1.381 |
| C6 |
H6 |
1.080 |
1.081 |
| C7 |
C8 |
1.397 |
1.387 |
| C7 |
H7 |
1.081 |
1.080 |
| C8 |
C9 |
1.393 |
1.388 |
| C10 |
C9 |
1.399 |
1.381 |
| C9 |
H9 |
1.080 |
1.080 |
| C10 |
H10 |
1.080 |
1.081 |
| C17 |
C12 |
1.407 |
1.380 |
| C12 |
C13 |
1.402 |
1.384 |
| C14 |
C13 |
1.393 |
1.382 |
| C13 |
H13 |
1.080 |
1.080 |
| C15 |
C14 |
1.392 |
1.383 |
| C14 |
H14 |
1.080 |
1.080 |
| C16 |
C15 |
1.400 |
1.395 |
| C18 |
C16 |
1.467 |
1.483 |
| C16 |
C17 |
1.401 |
1.394 |
| C17 |
H17 |
1.080 |
1.079 |
| C19 |
C18 |
1.390 |
1.397 |
| C18 |
C21 |
1.391 |
1.397 |
| C19 |
H19 |
1.080 |
1.080 |
| C20 |
H20 |
1.080 |
1.080 |
| C21 |
H21 |
1.080 |
1.080 |
Bond Angles for 569
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N1 |
C1 |
H1 |
109.5 |
109.5 |
| N1 |
C1 |
H1A |
109.5 |
109.5 |
| N1 |
C1 |
H1B |
109.5 |
109.4 |
| H1 |
C1 |
H1A |
109.5 |
109.5 |
| H1 |
C1 |
H1B |
109.4 |
109.5 |
| H1A |
C1 |
H1B |
109.5 |
109.4 |
| F1 |
C11 |
F2 |
107.8 |
109.5 |
| F1 |
C11 |
O2 |
111.3 |
109.4 |
| F1 |
C11 |
F3 |
109.8 |
109.5 |
| N1 |
C2 |
O1 |
127.6 |
127.5 |
| C3 |
N2 |
C4 |
107.5 |
107.5 |
| N2 |
C4 |
N3 |
124.5 |
123.6 |
| N2 |
C3 |
C5 |
112.4 |
110.5 |
| C8 |
O2 |
C11 |
117.4 |
117.1 |
| O2 |
C11 |
F3 |
111.2 |
109.4 |
| C3 |
C5 |
C10 |
121.1 |
119.9 |
| C4 |
N3 |
HN3 |
120.0 |
120.0 |
| C4 |
N3 |
HN3A |
120.0 |
120.0 |
| HN3 |
N3 |
HN3A |
120.0 |
120.0 |
| F4 |
C15 |
C14 |
118.0 |
120.1 |
| C19 |
N4 |
C20 |
114.9 |
121.0 |
| N4 |
C19 |
C18 |
124.8 |
118.9 |
| N4 |
C19 |
H19 |
117.6 |
120.6 |
| N4 |
C20 |
N5 |
126.8 |
122.0 |
| N4 |
C20 |
H20 |
116.6 |
119.0 |
| C6 |
C5 |
C10 |
117.9 |
120.1 |
| C5 |
C10 |
C9 |
121.2 |
120.1 |
| C5 |
C10 |
H10 |
119.4 |
120.0 |
| C20 |
N5 |
C21 |
115.2 |
120.9 |
| N5 |
C21 |
C18 |
124.4 |
119.0 |
| N5 |
C21 |
H21 |
117.8 |
120.5 |
| C7 |
C6 |
H6 |
119.6 |
120.0 |
| C6 |
C7 |
C8 |
120.6 |
119.9 |
| C6 |
C7 |
H7 |
119.7 |
120.0 |
| C8 |
C7 |
H7 |
119.7 |
120.1 |
| C7 |
C8 |
C9 |
119.2 |
119.9 |
| C8 |
C9 |
H9 |
119.9 |
120.0 |
| C10 |
C9 |
H9 |
119.9 |
120.1 |
| C12 |
C13 |
H13 |
120.0 |
119.8 |
| C14 |
C13 |
H13 |
120.0 |
119.9 |
| C15 |
C14 |
H14 |
120.1 |
120.0 |
| C16 |
C17 |
H17 |
118.9 |
120.1 |
| C19 |
C18 |
C21 |
113.9 |
118.1 |
| C18 |
C21 |
H21 |
117.8 |
120.5 |
Torsion Angles for 569
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H1 |
C1 |
N1 |
H1A |
240.0 |
239.9 |
| H1 |
C1 |
N1 |
H1B |
120.0 |
120.0 |
| H1A |
C1 |
N1 |
H1B |
240.0 |
240.1 |
| N1 |
C1 |
H1 |
H1A |
120.0 |
120.0 |
| N1 |
C1 |
H1 |
H1B |
240.0 |
240.0 |
| H1A |
C1 |
H1 |
H1B |
120.0 |
120.0 |
| N1 |
C1 |
H1A |
H1 |
240.0 |
239.9 |
| N1 |
C1 |
H1A |
H1B |
120.0 |
119.9 |
| H1 |
C1 |
H1A |
H1B |
240.0 |
240.0 |
| N1 |
C1 |
H1B |
H1 |
120.0 |
120.0 |
| N1 |
C1 |
H1B |
H1A |
240.0 |
240.1 |
| H1 |
C1 |
H1B |
H1A |
120.0 |
120.0 |
| C8 |
O2 |
C11 |
F1 |
311.5 |
60.0 |
| O2 |
C11 |
F1 |
F3 |
236.5 |
240.1 |
| C4 |
N1 |
C1 |
H1 |
180.0 |
269.7 |
| C4 |
N1 |
C1 |
H1A |
300.0 |
29.8 |
| C4 |
N1 |
C1 |
H1B |
60.0 |
149.7 |
| C2 |
N1 |
C1 |
H1 |
359.6 |
90.0 |
| C2 |
N1 |
C1 |
H1A |
119.6 |
210.0 |
| C2 |
N1 |
C1 |
H1B |
239.6 |
329.9 |
| F1 |
C11 |
F2 |
O2 |
120.4 |
120.0 |
| F1 |
C11 |
F2 |
F3 |
241.2 |
240.0 |
| C4 |
N2 |
C3 |
C5 |
244.6 |
241.4 |
| N2 |
C4 |
N3 |
HN3 |
0.0 |
359.9 |
| N2 |
C4 |
N3 |
HN3A |
180.0 |
179.9 |
| C3 |
N2 |
C4 |
N3 |
174.1 |
180.0 |
| N2 |
C3 |
C5 |
C10 |
143.7 |
344.2 |
| F1 |
C11 |
O2 |
C8 |
311.5 |
60.0 |
| C8 |
O2 |
C11 |
F3 |
188.8 |
300.0 |
| F1 |
C11 |
O2 |
F2 |
241.8 |
240.0 |
| F1 |
C11 |
O2 |
F3 |
122.7 |
120.0 |
| C5 |
C3 |
N2 |
C4 |
244.6 |
241.4 |
| C6 |
C5 |
C3 |
C10 |
179.9 |
180.3 |
| C3 |
C5 |
C10 |
C9 |
179.9 |
179.7 |
| C3 |
C5 |
C10 |
H10 |
359.9 |
360.0 |
| F1 |
C11 |
F3 |
F2 |
117.5 |
120.0 |
| F1 |
C11 |
F3 |
O2 |
236.4 |
240.1 |
| HN3 |
N3 |
C4 |
HN3A |
180.0 |
180.0 |
| C4 |
N3 |
HN3 |
HN3A |
180.0 |
180.0 |
| C4 |
N3 |
HN3A |
HN3 |
180.0 |
180.0 |
| F4 |
C15 |
C14 |
H14 |
0.3 |
359.9 |
| C19 |
N4 |
C20 |
N5 |
0.0 |
360.0 |
| C19 |
N4 |
C20 |
H20 |
180.0 |
179.9 |
| N4 |
C19 |
C18 |
C21 |
360.0 |
359.9 |
| C20 |
N4 |
C19 |
C18 |
360.0 |
0.1 |
| C20 |
N4 |
C19 |
H19 |
180.0 |
180.0 |
| N4 |
C20 |
N5 |
C21 |
0.1 |
360.0 |
| C3 |
C5 |
C6 |
C10 |
180.1 |
179.7 |
| C6 |
C5 |
C10 |
C9 |
0.0 |
359.5 |
| C6 |
C5 |
C10 |
H10 |
180.1 |
179.7 |
| C5 |
C10 |
C9 |
H9 |
180.1 |
180.3 |
| N4 |
C20 |
N5 |
H20 |
180.0 |
180.0 |
| C20 |
N5 |
C21 |
C18 |
359.9 |
0.0 |
| C20 |
N5 |
C21 |
H21 |
179.9 |
180.0 |
| C19 |
C18 |
C21 |
N5 |
0.1 |
0.0 |
| C18 |
C21 |
N5 |
H21 |
180.0 |
180.0 |
| C7 |
C6 |
C5 |
C10 |
359.9 |
0.3 |
| C8 |
C7 |
C6 |
H7 |
180.0 |
179.9 |
| C6 |
C7 |
C8 |
C9 |
360.0 |
0.1 |
| H6 |
C6 |
C5 |
C10 |
179.9 |
180.2 |
| H6 |
C6 |
C7 |
C8 |
180.1 |
180.0 |
| H6 |
C6 |
C7 |
H7 |
0.1 |
0.1 |
| C7 |
C8 |
O2 |
C11 |
93.8 |
180.0 |
| C8 |
C7 |
C6 |
H6 |
180.1 |
180.0 |
| C6 |
C7 |
C8 |
H7 |
180.0 |
180.1 |
| C7 |
C8 |
C9 |
H9 |
180.0 |
180.0 |
| H7 |
C7 |
C6 |
H6 |
0.1 |
0.1 |
| C6 |
C7 |
H7 |
C8 |
180.0 |
179.9 |
| H7 |
C7 |
C8 |
C9 |
179.9 |
180.0 |
| C9 |
C8 |
O2 |
C11 |
273.9 |
360.0 |
| C5 |
C10 |
C9 |
C8 |
0.0 |
0.5 |
| C9 |
C8 |
C7 |
H7 |
179.9 |
180.0 |
| C10 |
C9 |
C8 |
H9 |
180.0 |
179.7 |
| C5 |
C10 |
C9 |
H10 |
180.0 |
180.2 |
| C8 |
C9 |
C10 |
H9 |
180.0 |
180.3 |
| C5 |
C10 |
H10 |
C9 |
180.0 |
179.8 |
| H10 |
C10 |
C9 |
H9 |
0.0 |
0.0 |
| C17 |
C12 |
C13 |
H13 |
180.2 |
180.2 |
| C14 |
C13 |
C12 |
H13 |
180.0 |
180.1 |
| F4 |
C15 |
C14 |
C13 |
180.2 |
180.0 |
| C12 |
C13 |
C14 |
H13 |
180.0 |
179.9 |
| C15 |
C14 |
C13 |
H13 |
179.8 |
180.0 |
| H14 |
C14 |
C13 |
H13 |
359.8 |
0.1 |
| C16 |
C15 |
C14 |
H14 |
180.1 |
180.0 |
| N4 |
C19 |
C18 |
C16 |
180.1 |
180.0 |
| N5 |
C21 |
C18 |
C16 |
180.0 |
180.0 |
| C18 |
C16 |
C17 |
H17 |
360.0 |
359.7 |
| C18 |
C19 |
N4 |
C20 |
360.0 |
0.1 |
| N4 |
C19 |
C18 |
H19 |
180.0 |
179.9 |
| N5 |
C21 |
C18 |
C19 |
0.1 |
0.0 |
| C19 |
C18 |
C21 |
H21 |
180.1 |
180.1 |
| N5 |
C21 |
C18 |
H21 |
180.0 |
180.0 |
| H19 |
C19 |
N4 |
C20 |
180.0 |
180.0 |
| N4 |
C19 |
H19 |
C18 |
180.0 |
180.1 |
| H19 |
C19 |
C18 |
C21 |
179.9 |
180.0 |
| N4 |
C20 |
H20 |
N5 |
180.0 |
180.0 |
| H20 |
C20 |
N5 |
C21 |
180.1 |
180.0 |
| N5 |
C21 |
H21 |
C18 |
180.0 |
180.0 |