PDB Chemical Component 532

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 532

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 N1 1.437 1.465
N1 C2 1.344 1.350
N1 C4 1.338 1.373
O1 C2 1.230 1.213
S1 C18 1.706 1.759
S1 C19 1.715 1.759
C2 C3 1.528 1.515
N2 C3 1.498 1.472
N2 C4 1.281 1.297
C3 C5 1.523 1.508
C3 C16 1.502 1.507
N3 C4 1.333 1.375
N4 C14 1.339 1.319
N4 C15 1.361 1.318
C5 C6 1.398 1.383
C5 C10 1.382 1.380
C6 C7 1.399 1.384
C7 C8 1.392 1.380
C8 C9 1.406 1.394
C9 C10 1.395 1.394
C9 C11 1.482 1.483
C11 C12 1.406 1.398
C11 C15 1.398 1.393
C12 C13 1.392 1.384
C13 C14 1.396 1.383
C16 C17 1.424 1.383
C16 C19 1.378 1.334
C17 C18 1.374 1.334
C1 H1 1.100 1.090
C1 H1A 1.101 1.090
C1 H1B 1.100 1.091
N3 HN3 1.000 0.969
N3 HN3A 0.999 0.970
C6 H6 1.080 1.080
C7 H7 1.080 1.080
C8 H8 1.080 1.079
C10 H10 1.080 1.080
C12 H12 1.080 1.080
C13 H13 1.080 1.080
C14 H14 1.080 1.080
C15 H15 1.080 1.080
C17 H17 1.080 1.080
C18 H18 1.080 1.080
C19 H19 1.080 1.079

Bond Angles for 532

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1 N1 C2 122.7 124.7
C1 N1 C4 127.5 124.7
N1 C1 H1 109.5 109.5
N1 C1 H1A 109.5 109.5
N1 C1 H1B 109.4 109.4
C2 N1 C4 109.7 110.6
N1 C2 O1 126.1 127.4
N1 C2 C3 104.7 105.1
N1 C4 N2 117.5 112.8
N1 C4 N3 119.8 123.6
O1 C2 C3 129.2 127.5
C18 S1 C19 90.1 91.0
S1 C18 C17 113.5 109.6
S1 C18 H18 123.2 125.3
S1 C19 C16 113.8 109.6
S1 C19 H19 123.1 125.2
C2 C3 N2 104.1 103.9
C2 C3 C5 106.7 110.5
C2 C3 C16 112.8 110.6
C3 N2 C4 104.0 107.6
N2 C3 C5 114.6 110.5
N2 C3 C16 110.4 110.5
N2 C4 N3 122.6 123.6
C5 C3 C16 108.3 110.6
C3 C5 C6 125.7 119.9
C3 C5 C10 116.4 119.9
C3 C16 C17 123.7 122.6
C3 C16 C19 125.7 122.5
C4 N3 HN3 120.0 120.0
C4 N3 HN3A 120.0 119.9
C14 N4 C15 116.4 121.8
N4 C14 C13 122.9 121.0
N4 C14 H14 118.5 119.5
N4 C15 C11 126.1 120.6
N4 C15 H15 117.0 119.7
C6 C5 C10 117.9 120.2
C5 C6 C7 119.1 120.2
C5 C6 H6 120.4 119.9
C5 C10 C9 124.6 119.9
C5 C10 H10 117.7 120.1
C6 C7 C8 121.8 120.2
C7 C6 H6 120.5 119.9
C6 C7 H7 119.1 119.9
C7 C8 C9 119.9 119.8
C8 C7 H7 119.1 119.9
C7 C8 H8 120.1 120.1
C8 C9 C10 116.7 119.8
C8 C9 C11 124.6 120.1
C9 C8 H8 120.1 120.1
C10 C9 C11 118.7 120.1
C9 C10 H10 117.7 120.0
C9 C11 C12 121.9 120.5
C9 C11 C15 122.8 120.5
C12 C11 C15 115.3 118.9
C11 C12 C13 120.1 118.3
C11 C12 H12 119.9 120.8
C11 C15 H15 117.0 119.7
C12 C13 C14 119.3 119.3
C13 C12 H12 119.9 120.9
C12 C13 H13 120.4 120.3
C14 C13 H13 120.4 120.4
C13 C14 H14 118.6 119.5
C17 C16 C19 110.6 114.9
C16 C17 C18 111.9 114.9
C16 C17 H17 124.0 122.6
C16 C19 H19 123.1 125.2
C18 C17 H17 124.1 122.5
C17 C18 H18 123.2 125.1
H1 C1 H1A 109.5 109.5
H1 C1 H1B 109.5 109.5
H1A C1 H1B 109.5 109.5
HN3 N3 HN3A 120.0 120.0

Torsion Angles for 532

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C1 C4 181.6 180.2
C1 N1 C2 O1 0.6 0.1
C1 N1 C2 C3 178.5 180.1
C1 N1 C4 N2 183.2 179.7
C1 N1 C4 N3 7.8 360.0
H1 C1 N1 H1A 240.0 239.9
H1 C1 N1 H1B 120.0 120.0
H1A C1 N1 H1B 240.0 240.1
C1 N1 C2 C4 178.7 179.8
C2 N1 C1 H1 180.0 89.9
C2 N1 C1 H1A 300.0 210.0
C2 N1 C1 H1B 60.0 329.9
C2 N1 C4 N2 1.8 359.5
C2 N1 C4 N3 186.4 179.8
O1 C2 N1 C3 182.1 180.0
N1 C2 C3 N2 358.9 360.0
N1 C2 C3 C5 237.3 241.4
N1 C2 C3 C16 118.6 118.6
C1 N1 C4 C2 181.4 180.2
C4 N1 C1 H1 358.4 269.7
C4 N1 C1 H1A 118.4 29.8
C4 N1 C1 H1B 238.4 149.7
C4 N1 C2 O1 181.9 180.3
C4 N1 C2 C3 359.8 0.3
C3 N2 C4 N1 357.6 0.5
N2 C4 N1 N3 175.4 179.8
N1 C4 N3 HN3 175.2 360.0
N1 C4 N3 HN3A 355.1 180.1
O1 C2 N1 C4 181.9 180.3
N1 C2 O1 C3 177.4 180.0
O1 C2 C3 N2 176.7 180.0
O1 C2 C3 C5 55.1 61.4
O1 C2 C3 C16 296.4 298.6
C18 S1 C19 C16 0.3 0.0
C18 S1 C19 H19 180.3 179.9
C16 C17 C18 S1 360.0 360.0
S1 C18 C17 H17 180.0 180.0
C17 C18 S1 H18 180.0 180.0
C19 S1 C18 C17 359.9 0.0
C19 S1 C18 H18 179.8 180.0
C3 C16 C19 S1 180.0 180.0
C17 C16 C19 S1 359.7 360.0
C16 C19 S1 H19 180.0 180.1
C3 C2 N1 C4 359.8 0.3
N1 C2 C3 O1 182.2 180.0
C2 C3 N2 C4 2.0 359.7
N2 C3 C2 C5 121.6 118.6
N2 C3 C2 C16 240.3 241.4
C5 C3 C2 C16 118.7 122.8
C2 C3 C5 C6 243.8 306.7
C2 C3 C5 C10 63.1 126.4
C2 C3 C16 C17 210.7 228.0
C2 C3 C16 C19 30.3 47.9
N1 C4 N2 C3 357.6 0.5
C2 C3 N2 C5 243.8 241.4
C2 C3 N2 C16 121.3 118.6
C3 N2 C4 N3 172.9 180.2
C5 C3 N2 C16 237.5 237.2
N2 C3 C5 C6 129.1 192.3
N2 C3 C5 C10 308.5 12.0
N2 C3 C16 C17 326.7 342.5
N2 C3 C16 C19 146.3 162.4
N1 C4 N2 N3 184.7 180.2
C4 N2 C3 C5 118.1 118.3
C4 N2 C3 C16 240.7 241.1
N2 C4 N3 HN3 360.0 180.2
N2 C4 N3 HN3A 180.0 0.3
C2 C3 C5 N2 114.7 114.4
C2 C3 C5 C16 238.3 237.2
C5 C3 N2 C4 118.1 118.3
N2 C3 C5 C16 123.7 122.7
C5 C3 C16 C17 92.9 105.2
C5 C3 C16 C19 272.5 285.1
C6 C5 C3 C10 180.7 180.3
C3 C5 C6 C7 179.7 180.1
C3 C5 C6 H6 359.8 360.0
C3 C5 C10 C9 180.0 179.7
C3 C5 C10 H10 0.0 359.9
S1 C19 C16 C3 180.0 180.0
C2 C3 C16 N2 244.0 245.5
C2 C3 C16 C5 117.8 122.8
C16 C3 N2 C4 240.7 241.1
N2 C3 C16 C5 233.8 237.3
C16 C3 C5 C6 5.5 69.6
C16 C3 C5 C10 184.8 249.3
C17 C16 C3 C19 180.4 180.1
C3 C16 C17 C18 179.9 180.0
C3 C16 C17 H17 359.9 359.9
C3 C16 C19 H19 0.0 0.1
N1 C4 N3 N2 175.2 179.7
HN3 N3 C4 HN3A 180.0 179.9
C14 N4 C15 C11 0.2 0.0
C14 N4 C15 H15 180.2 180.0
C12 C13 C14 N4 0.1 0.1
N4 C14 C13 H13 180.1 180.0
C13 C14 N4 H14 180.0 180.0
C15 N4 C14 C13 359.9 360.0
C15 N4 C14 H14 179.9 180.0
C9 C11 C15 N4 180.0 180.1
C12 C11 C15 N4 359.8 359.9
C11 C15 N4 H15 180.0 180.0
C6 C5 C3 C16 5.5 69.6
C3 C5 C6 C10 179.3 179.7
C6 C5 C10 C9 359.4 359.5
C6 C5 C10 H10 179.4 179.7
C5 C6 C7 C8 359.4 359.9
C7 C6 C5 H6 180.0 180.1
C5 C6 C7 H7 179.4 180.0
C10 C5 C3 C16 184.8 249.3
C3 C5 C10 C6 180.6 180.3
C10 C5 C6 C7 0.4 0.4
C10 C5 C6 H6 180.5 180.2
C8 C9 C10 C5 0.8 0.5
C5 C10 C9 C11 179.1 180.3
C9 C10 C5 H10 180.0 179.8
C7 C6 C5 C10 0.4 0.4
C5 C6 C7 H6 180.0 179.9
C6 C7 C8 C9 0.9 0.1
C8 C7 C6 H7 180.0 179.9
C6 C7 C8 H8 180.8 180.0
C8 C7 C6 H6 179.4 180.0
C6 C7 C8 H7 180.0 180.1
C7 C8 C9 C10 359.1 359.7
C7 C8 C9 C11 180.9 179.9
C9 C8 C7 H8 180.0 180.0
C5 C10 C9 C8 0.8 0.5
C9 C8 C7 H7 180.8 180.0
C7 C8 C9 H8 180.0 180.0
C10 C9 C8 C11 178.2 179.8
C8 C9 C10 H10 180.8 180.3
C8 C9 C11 C12 42.9 0.1
C8 C9 C11 C15 222.7 180.0
C5 C10 C9 H10 180.0 180.2
C8 C9 C10 C11 181.7 180.2
C10 C9 C8 H8 179.1 179.8
C10 C9 C11 C12 224.7 180.3
C10 C9 C11 C15 44.5 0.1
N4 C15 C11 C9 180.0 180.1
C8 C9 C11 C10 178.2 179.8
C11 C9 C8 H8 0.9 360.0
C11 C9 C10 H10 359.1 0.1
C12 C11 C9 C15 180.2 180.1
C9 C11 C12 C13 180.0 180.0
C9 C11 C12 H12 360.0 359.9
C9 C11 C15 H15 360.0 0.0
N4 C15 C11 C12 359.8 359.9
C9 C11 C12 C15 179.8 179.9
C12 C11 C15 H15 179.8 179.9
C11 C12 C13 C14 359.9 359.9
C13 C12 C11 H12 180.0 180.1
C11 C12 C13 H13 179.9 179.9
N4 C15 C11 H15 180.0 180.0
C9 C11 C15 C12 180.2 180.1
C15 C11 C12 C13 0.1 0.1
C15 C11 C12 H12 180.1 180.0
N4 C14 C13 C12 0.1 0.1
C13 C12 C11 C15 0.1 0.1
C11 C12 C13 H12 180.0 179.9
C14 C13 C12 H13 180.0 179.9
C12 C13 C14 H14 180.1 180.1
C13 C14 N4 C15 359.9 360.0
N4 C14 C13 H14 180.0 180.0
C14 C13 C12 H12 179.9 180.0
C12 C13 C14 H13 180.0 180.1
S1 C18 C17 C16 360.0 360.0
S1 C19 C16 C17 359.7 360.0
C3 C16 C17 C19 179.7 179.9
C17 C16 C19 H19 179.7 180.0
C18 C17 C16 H17 180.0 180.1
C16 C17 C18 H18 180.0 180.0
S1 C19 C16 H19 180.0 179.9
C3 C16 C19 C17 180.3 180.1
C19 C16 C17 C18 0.2 0.0
C19 C16 C17 H17 180.2 180.0
C17 C18 S1 C19 359.9 0.0
S1 C18 C17 H18 180.0 180.0
C18 C17 C16 C19 0.2 0.0
C16 C17 C18 H17 180.0 179.9
H1 C1 N1 C2 180.0 89.9
H1 C1 N1 C4 358.4 269.7
N1 C1 H1 H1A 120.0 120.0
N1 C1 H1 H1B 240.0 240.1
H1A C1 H1 H1B 120.0 120.0
H1A C1 N1 C2 300.0 210.0
H1A C1 N1 C4 118.4 29.8
N1 C1 H1A H1 240.0 240.0
N1 C1 H1A H1B 120.0 119.9
H1 C1 H1A H1B 240.0 239.9
H1B C1 N1 C2 60.0 329.9
H1B C1 N1 C4 238.4 149.7
N1 C1 H1B H1 120.0 120.0
N1 C1 H1B H1A 240.0 240.0
H1 C1 H1B H1A 120.0 120.1
C4 N3 HN3 HN3A 180.0 180.1
C4 N3 HN3A HN3 180.0 179.9
H6 C6 C5 C10 180.5 180.2
C5 C6 H6 C7 180.0 180.1
H6 C6 C7 C8 179.4 180.0
H6 C6 C7 H7 359.4 0.1
C6 C7 H7 C8 180.0 179.9
H7 C7 C6 H6 359.4 0.1
H7 C7 C8 C9 180.8 180.0
H7 C7 C8 H8 0.8 359.9
C7 C8 H8 C9 180.0 180.0
H8 C8 C7 H7 0.8 359.9
H8 C8 C9 C10 179.1 179.8
H8 C8 C9 C11 0.9 360.0
C5 C10 H10 C9 180.0 179.8
H10 C10 C9 C11 359.1 0.1
H12 C12 C11 C15 180.1 180.0
C11 C12 H12 C13 180.0 180.1
H12 C12 C13 C14 179.9 180.0
H12 C12 C13 H13 359.9 0.1
C12 C13 H13 C14 180.0 179.9
H13 C13 C12 H12 359.9 0.1
H13 C13 C14 H14 0.1 0.0
H14 C14 N4 C15 179.9 180.0
N4 C14 H14 C13 180.0 180.0
H14 C14 C13 H13 0.1 0.0
N4 C15 H15 C11 180.0 180.0
H17 C17 C16 C19 180.2 180.0
C16 C17 H17 C18 180.0 180.1
H17 C17 C18 H18 0.0 0.1
H18 C18 S1 C19 179.8 180.0
S1 C18 H18 C17 180.0 180.0
H18 C18 C17 H17 0.0 0.1
S1 C19 H19 C16 180.0 180.1