PDB Chemical Component 52P
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 52P
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C2 |
F1 |
1.338 |
1.351 |
| C2 |
C3 |
1.387 |
1.384 |
| C3 |
H3 |
1.080 |
1.080 |
| C4 |
C3 |
1.386 |
1.381 |
| C4 |
H4 |
1.080 |
1.081 |
| C5 |
C4 |
1.395 |
1.389 |
| S6 |
C5 |
1.757 |
1.762 |
| S6 |
C7 |
1.771 |
1.763 |
| C7 |
N25 |
1.317 |
1.313 |
| C8 |
C7 |
1.417 |
1.410 |
| C8 |
C9 |
1.364 |
1.360 |
| C8 |
H8 |
1.080 |
1.080 |
| C9 |
C10 |
1.417 |
1.406 |
| C9 |
H9 |
1.080 |
1.081 |
| C10 |
C11 |
1.418 |
1.402 |
| C10 |
N24 |
1.383 |
1.371 |
| C11 |
C20 |
1.425 |
1.415 |
| C12 |
C11 |
1.489 |
1.479 |
| C12 |
C13 |
1.407 |
1.397 |
| C13 |
CL14 |
1.734 |
1.735 |
| C15 |
C13 |
1.390 |
1.381 |
| C15 |
H15 |
1.080 |
1.081 |
| C16 |
C15 |
1.384 |
1.383 |
| C16 |
H16 |
1.080 |
1.080 |
| C17 |
C16 |
1.386 |
1.383 |
| C17 |
C18 |
1.385 |
1.380 |
| C17 |
H17 |
1.080 |
1.081 |
| C18 |
C12 |
1.400 |
1.397 |
| CL19 |
C18 |
1.738 |
1.736 |
| C20 |
O21 |
1.225 |
1.224 |
| C20 |
N22 |
1.343 |
1.343 |
| C23 |
N22 |
1.303 |
1.304 |
| C23 |
H23 |
1.080 |
1.080 |
| N24 |
C23 |
1.359 |
1.356 |
| N25 |
N24 |
1.402 |
1.401 |
| C26 |
C5 |
1.395 |
1.391 |
| C26 |
C28 |
1.378 |
1.383 |
| F27 |
C26 |
1.346 |
1.351 |
| C28 |
C2 |
1.389 |
1.385 |
| C28 |
H28 |
1.080 |
1.080 |
Bond Angles for 52P
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C3 |
H3 |
120.6 |
120.0 |
| C4 |
C3 |
H3 |
120.7 |
119.9 |
| C5 |
C4 |
H4 |
120.1 |
120.0 |
| S6 |
C7 |
N25 |
120.9 |
119.5 |
| C8 |
C7 |
N25 |
120.6 |
121.0 |
| C7 |
N25 |
N24 |
120.7 |
120.6 |
| C9 |
C8 |
H8 |
119.8 |
120.1 |
| C8 |
C9 |
C10 |
119.1 |
119.1 |
| C8 |
C9 |
H9 |
120.5 |
120.4 |
| C10 |
C9 |
H9 |
120.5 |
120.4 |
| C9 |
C10 |
C11 |
122.1 |
121.1 |
| C9 |
C10 |
N24 |
119.2 |
119.9 |
| C11 |
C10 |
N24 |
118.7 |
119.0 |
| C10 |
C11 |
C20 |
116.7 |
117.9 |
| C10 |
N24 |
C23 |
120.6 |
120.0 |
| C12 |
C11 |
C20 |
120.5 |
121.1 |
| C11 |
C20 |
O21 |
120.1 |
120.2 |
| C11 |
C20 |
N22 |
120.5 |
119.4 |
| C12 |
C13 |
CL14 |
121.7 |
120.1 |
| C16 |
C15 |
H15 |
119.9 |
119.9 |
| C17 |
C16 |
H16 |
119.9 |
119.9 |
| C18 |
C17 |
H17 |
120.0 |
119.9 |
| O21 |
C20 |
N22 |
119.4 |
120.3 |
| N24 |
C23 |
H23 |
119.2 |
119.0 |
| F27 |
C26 |
C28 |
119.8 |
120.0 |
| C26 |
C28 |
H28 |
120.3 |
120.0 |
Torsion Angles for 52P
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C4 |
C3 |
C2 |
H3 |
180.0 |
179.9 |
| C2 |
C3 |
C4 |
H3 |
180.0 |
180.1 |
| H4 |
C4 |
C3 |
H3 |
0.2 |
360.0 |
| C5 |
C4 |
C3 |
H3 |
180.2 |
180.0 |
| S6 |
C5 |
C4 |
H4 |
0.5 |
0.1 |
| C8 |
C7 |
S6 |
N25 |
179.3 |
180.2 |
| S6 |
C7 |
N25 |
N24 |
179.5 |
179.7 |
| S6 |
C7 |
C8 |
N25 |
180.7 |
179.8 |
| C8 |
C7 |
N25 |
N24 |
0.2 |
359.5 |
| C9 |
C8 |
C7 |
N25 |
359.8 |
0.2 |
| C10 |
C9 |
C8 |
H9 |
180.0 |
180.1 |
| C8 |
C9 |
C10 |
C11 |
179.9 |
180.0 |
| C8 |
C9 |
C10 |
N24 |
360.0 |
359.9 |
| H8 |
C8 |
C7 |
N25 |
179.8 |
180.2 |
| H8 |
C8 |
C9 |
C10 |
180.1 |
180.1 |
| H8 |
C8 |
C9 |
H9 |
0.1 |
359.9 |
| C10 |
C9 |
C8 |
H8 |
180.1 |
180.1 |
| C8 |
C9 |
C10 |
H9 |
180.0 |
179.9 |
| C11 |
C10 |
C9 |
N24 |
179.9 |
180.0 |
| C9 |
C10 |
C11 |
C20 |
180.2 |
180.0 |
| C9 |
C10 |
N24 |
C23 |
179.8 |
180.0 |
| H9 |
C9 |
C8 |
H8 |
0.1 |
359.9 |
| C8 |
C9 |
H9 |
C10 |
180.0 |
180.1 |
| H9 |
C9 |
C10 |
C11 |
359.9 |
0.1 |
| H9 |
C9 |
C10 |
N24 |
180.0 |
180.0 |
| C11 |
C10 |
C9 |
H9 |
359.9 |
0.1 |
| C9 |
C10 |
C11 |
N24 |
180.1 |
180.0 |
| C11 |
C10 |
N24 |
C23 |
359.9 |
359.9 |
| C12 |
C11 |
C10 |
C20 |
179.3 |
180.0 |
| C10 |
C11 |
C20 |
O21 |
179.9 |
180.0 |
| C10 |
C11 |
C20 |
N22 |
359.9 |
360.0 |
| C7 |
N25 |
N24 |
C10 |
359.9 |
0.5 |
| N24 |
C10 |
C9 |
H9 |
180.0 |
180.0 |
| C9 |
C10 |
N24 |
C11 |
179.9 |
180.0 |
| N24 |
C10 |
C11 |
C20 |
0.1 |
0.0 |
| C10 |
N24 |
C23 |
H23 |
180.1 |
180.0 |
| C20 |
C11 |
C10 |
N24 |
0.1 |
0.0 |
| O21 |
C20 |
C11 |
N22 |
180.0 |
180.1 |
| C12 |
C11 |
C10 |
N24 |
179.4 |
180.0 |
| C10 |
C11 |
C12 |
C20 |
180.8 |
180.0 |
| C12 |
C11 |
C20 |
O21 |
0.6 |
0.1 |
| C12 |
C11 |
C20 |
N22 |
180.6 |
180.0 |
| C13 |
C12 |
C11 |
C20 |
99.0 |
270.0 |
| H16 |
C16 |
C15 |
H15 |
359.9 |
359.9 |
| C17 |
C16 |
C15 |
H15 |
179.9 |
180.0 |
| C18 |
C17 |
C16 |
H16 |
179.8 |
179.7 |
| H17 |
C17 |
C16 |
H16 |
359.8 |
360.0 |
| C18 |
C12 |
C11 |
C20 |
279.8 |
89.7 |
| CL19 |
C18 |
C17 |
H17 |
0.3 |
359.7 |
| C11 |
C20 |
O21 |
N22 |
180.0 |
179.9 |
| C11 |
C20 |
N22 |
O21 |
180.0 |
180.1 |
| C10 |
N24 |
C23 |
N22 |
0.0 |
0.1 |
| C7 |
N25 |
N24 |
C23 |
180.1 |
180.3 |
| N25 |
N24 |
C23 |
H23 |
359.9 |
0.2 |
| C26 |
C5 |
C4 |
H4 |
179.5 |
180.0 |
| F27 |
C26 |
C28 |
H28 |
359.7 |
359.6 |
| C28 |
C2 |
C3 |
H3 |
180.0 |
180.3 |