PDB Chemical Component 52I

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 52I

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C28 C29 1.398 1.384
C28 C27 1.401 1.384
C29 C24 1.419 1.377
C27 C26 1.397 1.380
O30 C16 1.220 1.218
C24 C20 1.493 1.512
C24 C25 1.373 1.398
O11 C12 1.396 1.428
O11 C10 1.398 1.358
C20 N17 1.437 1.469
C20 C21 1.551 1.530
C22 C23 1.519 1.530
C22 C37 1.531 1.530
C22 C21 1.550 1.530
C16 N17 1.463 1.348
C16 C15 1.535 1.462
C26 C25 1.418 1.395
C14 C15 1.405 1.350
C14 C13 1.528 1.469
N17 N18 1.357 1.403
C25 C19 1.495 1.474
C10 C13 1.400 1.403
C10 C07 1.406 1.391
O08 C07 1.383 1.360
O08 C09 1.386 1.428
C13 C31 1.414 1.400
N18 C19 1.434 1.299
C07 C06 1.415 1.386
N33 C32 1.366 1.325
N33 C34 1.352 1.325
C31 C05 1.411 1.377
C32 C03 1.405 1.381
C06 C05 1.398 1.385
N35 C34 1.460 1.383
C05 C04 1.544 1.507
C34 N36 1.347 1.324
C03 C04 1.536 1.507
C03 C02 1.419 1.397
N36 C02 1.365 1.330
C02 N01 1.443 1.385
C12 H1 1.100 1.090
C12 H2 1.100 1.090
C12 H3 1.100 1.090
N01 H4 1.000 0.970
N01 H5 1.000 0.971
C04 H6 1.100 1.090
C04 H7 1.100 1.090
C06 H8 1.080 1.080
C09 H9 1.100 1.090
C09 H10 1.100 1.090
C09 H11 1.100 1.089
C31 H12 1.080 1.080
C32 H13 1.080 1.080
N35 H14 1.000 0.970
N35 H15 1.000 0.971
C14 H16 1.080 1.080
C19 H19 1.080 1.080
C26 H20 1.080 1.079
C27 H21 1.080 1.080
C28 H22 1.080 1.080
C29 H23 1.080 1.080
C20 H24 1.100 1.090
C21 H25 1.100 1.090
C21 H26 1.100 1.090
C15 H27 1.080 1.081
C22 H28 1.101 1.090
C23 H29 1.100 1.090
C23 H30 1.100 1.089
C23 H31 1.100 1.090
C37 H32 1.100 1.091
C37 H33 1.100 1.090
C37 H34 1.100 1.090

Bond Angles for 52I

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C28 C29 C24 119.5 119.9
C29 C28 H22 119.9 119.8
C28 C29 H23 120.3 120.1
C28 C27 H21 119.9 119.9
C29 C24 C20 122.0 120.8
C24 C29 H23 120.3 120.0
C27 C26 H20 120.3 120.1
O30 C16 N17 120.0 120.0
O30 C16 C15 119.8 120.0
C24 C20 C21 109.9 109.6
C24 C20 H24 108.3 109.6
O11 C12 H1 109.5 109.4
O11 C12 H2 109.5 109.5
O11 C12 H3 109.5 109.5
O11 C10 C13 119.8 120.2
C21 C20 H24 107.6 109.8
C20 C21 H25 107.3 109.5
C20 C21 H26 107.4 109.4
C23 C22 C37 113.6 109.5
C23 C22 H28 105.0 109.4
C22 C23 H29 109.5 109.4
C22 C23 H30 109.5 109.5
C22 C23 H31 109.4 109.4
C37 C22 H28 104.9 109.5
C22 C37 H32 109.5 109.5
C22 C37 H33 109.5 109.5
C22 C37 H34 109.4 109.5
C22 C21 H25 107.3 109.5
C22 C21 H26 107.4 109.5
N17 C16 C15 120.2 120.0
C16 N17 N18 119.0 120.2
C14 C15 C16 119.3 120.0
C16 C15 H27 120.3 120.0
C15 C14 H16 119.9 120.0
C14 C15 H27 120.4 120.0
N17 N18 C19 116.3 120.0
C25 C19 H19 123.8 120.1
C07 C10 C13 120.0 119.6
C10 C13 C31 120.1 119.6
C10 C07 C06 119.9 120.0
O08 C09 H9 109.5 109.5
O08 C09 H10 109.4 109.4
O08 C09 H11 109.4 109.5
C13 C31 H12 120.1 120.0
N18 C19 H19 123.7 120.1
C07 C06 H8 119.8 119.8
N33 C32 H13 121.0 120.4
N33 C34 N36 120.1 121.6
N35 C34 N36 119.7 119.2
C05 C04 H6 108.8 109.5
C05 C04 H7 108.8 109.4
C03 C04 H6 108.8 109.5
C03 C04 H7 108.8 109.5
C02 N01 H4 109.5 120.0
C02 N01 H5 109.5 120.0
H1 C12 H2 109.5 109.5
H1 C12 H3 109.4 109.4
H2 C12 H3 109.5 109.5
H4 N01 H5 109.5 120.0
H6 C04 H7 109.5 109.5
H9 C09 H10 109.5 109.4
H9 C09 H11 109.5 109.5
H10 C09 H11 109.5 109.5
H14 N35 H15 109.4 120.0
H25 C21 H26 109.5 109.5
H29 C23 H30 109.5 109.5
H29 C23 H31 109.5 109.5
H30 C23 H31 109.5 109.5
H32 C37 H33 109.5 109.4
H32 C37 H34 109.5 109.5
H33 C37 H34 109.5 109.5

Torsion Angles for 52I

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C29 C28 C27 H21 180.0 179.4
C28 C29 C24 C20 180.0 181.4
C24 C29 C28 H23 180.0 180.1
C28 C27 C26 H20 180.1 179.6
C24 C29 C28 H22 180.0 180.4
C28 C29 C24 H23 180.0 179.9
C29 C24 C20 C21 89.7 86.8
C29 C24 C20 H24 332.5 326.3
N17 C16 O30 C15 180.0 180.0
O30 C16 N17 N18 180.0 180.0
C14 C15 C16 O30 338.1 0.0
O30 C16 C15 H27 158.1 180.0
C20 C24 C29 H23 360.0 1.5
C21 C20 C24 H24 117.3 120.5
C24 C20 C21 H25 10.1 305.8
C24 C20 C21 H26 127.8 65.8
C24 C25 C19 H19 142.6 166.2
C12 O11 C10 C13 89.6 90.0
H1 C12 O11 H2 240.0 239.9
H1 C12 O11 H3 120.0 119.9
H2 C12 O11 H3 240.0 240.0
C07 C10 O11 C13 180.0 179.7
O11 C10 C13 C31 180.0 179.8
C20 N17 C16 C15 180.0 179.7
C24 C20 C21 H24 242.3 239.6
C22 C21 C20 H25 238.8 239.9
C22 C21 C20 H26 121.2 119.9
H25 C21 C20 H26 242.4 240.0
C37 C22 C23 H28 246.0 120.1
C23 C22 C37 H32 180.0 300.7
C23 C22 C37 H33 300.0 60.6
C23 C22 C37 H34 60.0 180.7
C23 C22 C21 H25 143.5 306.2
C23 C22 C21 H26 25.9 186.1
H29 C23 C22 H30 240.0 240.0
H29 C23 C22 H31 120.0 120.0
H30 C23 C22 H31 240.0 240.0
C23 C22 C37 H28 114.1 240.0
C37 C22 C23 H29 180.0 60.0
C37 C22 C23 H30 300.0 180.0
C37 C22 C23 H31 60.0 300.1
C37 C22 C21 H25 11.4 66.2
C37 C22 C21 H26 253.8 306.1
H32 C37 C22 H33 240.0 240.0
H32 C37 C22 H34 120.0 120.0
H33 C37 C22 H34 240.0 240.0
C22 C21 C20 H24 6.7 306.2
C20 C21 C22 H25 121.2 120.0
C20 C21 C22 H26 238.8 240.1
H25 C21 C22 H26 117.6 120.0
O30 C16 N17 C15 180.0 180.0
C14 C15 C16 N17 158.1 180.0
N17 C16 C15 H27 338.1 0.0
C16 N17 N18 C19 169.7 212.0
O30 C16 C15 N17 180.0 180.0
C15 C16 N17 N18 359.9 0.0
C16 C15 C14 H16 354.8 360.0
C14 C15 C16 H27 180.0 180.0
C26 C25 C19 H19 322.5 347.2
O30 C16 C15 C14 338.1 0.0
N17 C16 C15 C14 158.1 180.0
C16 C15 C14 H27 180.0 180.0
C14 C13 C31 H12 359.7 0.1
N18 N17 C16 C15 359.9 0.0
N17 N18 C19 H19 222.7 178.7
N18 C19 C25 H19 180.0 180.1
C13 C10 C07 C06 0.0 360.0
C10 C13 C31 H12 179.8 180.0
O11 C10 C07 C13 180.0 180.3
C07 C10 C13 C31 360.0 0.0
C10 C07 C06 H8 180.1 180.0
O08 C07 C10 C13 180.0 180.0
O08 C07 C06 H8 0.2 360.0
H9 C09 O08 H10 240.0 240.1
H9 C09 O08 H11 120.0 120.0
H10 C09 O08 H11 240.0 240.0
C25 C19 N18 H19 180.0 179.9
C06 C07 C10 C13 0.0 360.0
C34 N33 C32 H13 180.0 180.0
N35 C34 N33 N36 180.0 180.3
C10 C13 C31 C05 359.8 360.0
C31 C05 C04 H6 187.7 150.1
C31 C05 C04 H7 306.9 30.0
C32 C03 C04 H6 229.9 25.0
C32 C03 C04 H7 110.7 145.0
C10 C07 C06 C05 0.2 0.0
C06 C05 C04 H6 7.1 330.0
C06 C05 C04 H7 126.2 210.0
N33 C34 N35 N36 180.0 179.7
C03 C04 C05 H6 239.6 120.0
C03 C04 C05 H7 120.4 240.0
H6 C04 C05 H7 240.8 120.0
C05 C04 C03 H6 120.4 240.0
C05 C04 C03 H7 239.6 119.9
H6 C04 C03 H7 119.2 239.9
C03 C02 N01 H4 180.1 0.0
C03 C02 N01 H5 300.1 180.0
N36 C02 N01 H4 0.0 179.7
N36 C02 N01 H5 120.0 359.7
H4 N01 C02 H5 240.0 180.0
O11 C12 H1 H2 120.0 120.0
O11 C12 H1 H3 240.0 240.1
H2 C12 H1 H3 120.0 120.0
O11 C12 H2 H1 240.0 240.0
O11 C12 H2 H3 120.0 120.0
H1 C12 H2 H3 240.0 240.0
O11 C12 H3 H1 120.0 119.9
O11 C12 H3 H2 240.0 240.0
H1 C12 H3 H2 120.0 120.0
C02 N01 H4 H5 120.0 180.0
C02 N01 H5 H4 240.0 180.0
C05 C04 H6 H7 118.8 240.0
C03 C04 H6 H7 241.2 120.0
C05 C04 H7 H6 241.2 120.0
C03 C04 H7 H6 118.8 240.0
O08 C09 H9 H10 120.0 119.9
O08 C09 H9 H11 240.0 240.0
H10 C09 H9 H11 120.0 120.0
O08 C09 H10 H9 240.0 240.0
O08 C09 H10 H11 120.0 120.0
H9 C09 H10 H11 240.0 240.0
O08 C09 H11 H9 120.0 120.0
O08 C09 H11 H10 240.0 240.0
H9 C09 H11 H10 120.0 120.0
H14 N35 C34 N36 180.0 180.3
H15 N35 C34 N36 299.9 0.3
H16 C14 C15 C16 354.8 360.0
H16 C14 C15 H27 174.9 180.0
H21 C27 C26 H20 0.1 359.6
H22 C28 C29 C24 180.0 180.4
H22 C28 C29 H23 0.0 0.3
H22 C28 C27 H21 359.9 359.4
C28 C29 H23 C24 180.0 180.1
H23 C29 C28 H22 0.0 0.3
H23 C29 C24 C20 360.0 1.5
C24 C20 H24 C21 118.7 120.4
H24 C20 C21 H25 127.8 66.2
H24 C20 C21 H26 245.5 186.2
H25 C21 C20 H24 127.8 66.2
C20 C21 H25 H26 116.2 120.0
C22 C21 H25 H26 243.8 240.0
H26 C21 C20 H24 245.5 186.2
C20 C21 H26 H25 243.8 240.0
C22 C21 H26 H25 116.2 120.0
C14 C15 H27 C16 180.0 180.0
H27 C15 C14 H16 174.9 180.0
C23 C22 H28 C37 240.0 120.0
H28 C22 C23 H29 294.0 300.0
H28 C22 C23 H30 54.0 60.0
H28 C22 C23 H31 174.0 180.0
H28 C22 C37 H32 65.9 60.7
H28 C22 C37 H33 185.9 180.7
H28 C22 C37 H34 305.9 300.7
H28 C22 C21 H25 257.5 186.2
H28 C22 C21 H26 139.9 66.2
H29 C23 C22 C37 180.0 60.0
H29 C23 C22 H28 294.0 300.0
C22 C23 H29 H30 120.0 120.0
C22 C23 H29 H31 240.0 240.0
H30 C23 H29 H31 120.0 120.0
H30 C23 C22 C37 300.0 180.0
H30 C23 C22 H28 54.0 60.0
C22 C23 H30 H29 240.0 240.0
C22 C23 H30 H31 120.0 120.0
H29 C23 H30 H31 240.0 240.0
H31 C23 C22 C37 60.0 300.1
H31 C23 C22 H28 174.0 180.0
C22 C23 H31 H29 120.0 119.9
C22 C23 H31 H30 240.0 240.0
H29 C23 H31 H30 120.0 120.0
H32 C37 C22 H28 65.9 60.7
C22 C37 H32 H33 120.0 120.0
C22 C37 H32 H34 240.0 240.0
H33 C37 H32 H34 120.0 120.0
H33 C37 C22 H28 185.9 180.7
C22 C37 H33 H32 240.0 240.0
C22 C37 H33 H34 120.0 120.0
H32 C37 H33 H34 240.0 240.0
H34 C37 C22 H28 305.9 300.7
C22 C37 H34 H32 120.0 120.0
C22 C37 H34 H33 240.0 239.9
H32 C37 H34 H33 120.0 120.0