PDB Chemical Component 529

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 529

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.488 1.471
N1 C5 1.357 1.339
N1 C21 1.514 1.399
C2 C3 1.534 1.540
C2 H2 1.100 1.090
C2 H21 1.100 1.090
C3 N4 1.456 1.471
C3 H3 1.100 1.091
C3 H31 1.100 1.090
N4 C5 1.307 1.340
N4 H4 1.000 0.969
C5 O24 1.245 1.216
N6 N7 1.338 1.284
N6 C10 1.378 1.358
N7 C8 1.366 1.380
C8 C9 1.393 1.485
C8 N14 1.445 1.311
C9 C10 1.374 1.346
C9 H9 1.080 1.080
C10 C11 1.535 1.506
C11 C12 1.541 1.529
C11 C13 1.495 1.530
C11 H11 1.100 1.091
C12 C13 1.547 1.530
C12 H121 1.099 1.089
C12 H122 1.100 1.091
C13 H131 1.100 1.090
C13 H132 1.100 1.090
N14 C15 1.344 1.348
C15 C16 1.548 1.507
C15 O17 1.242 1.208
C16 C18 1.539 1.507
C16 C25 1.559 1.530
C16 H16 1.100 1.090
C18 C19 1.423 1.383
C18 C23 1.431 1.383
C19 C20 1.404 1.381
C19 H19 1.080 1.080
C20 C21 1.440 1.389
C20 H20 1.080 1.079
C21 C22 1.440 1.389
C22 C23 1.400 1.382
C22 H22 1.080 1.079
C23 H23 1.080 1.080
C25 H251 1.100 1.090
C25 H252 1.100 1.090
C25 H253 1.100 1.089

Bond Angles for 529

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C5 107.9 109.2
C2 N1 C21 122.7 125.4
N1 C2 C3 104.8 103.8
N1 C2 H2 111.0 110.5
N1 C2 H21 112.1 110.5
C5 N1 C21 129.5 125.4
N1 C5 N4 112.5 114.0
N1 C5 O24 127.3 123.1
N1 C21 C20 122.2 120.1
N1 C21 C22 120.2 120.0
C3 C2 H2 111.1 110.6
C3 C2 H21 112.0 110.6
C2 C3 N4 101.9 103.9
C2 C3 H3 112.1 110.5
C2 C3 H31 113.7 110.6
H2 C2 H21 105.9 110.6
N4 C3 H3 112.1 110.5
N4 C3 H31 113.7 110.6
C3 N4 C5 112.9 109.1
C3 N4 H4 123.5 125.5
H3 C3 H31 103.8 110.6
C5 N4 H4 123.5 125.4
N4 C5 O24 120.2 123.0
N7 N6 C10 110.1 112.1
N6 N7 C8 107.0 109.1
N6 C10 C9 107.5 108.8
N6 C10 C11 124.6 125.6
N7 C8 C9 109.3 105.1
N7 C8 N14 122.1 127.4
C9 C8 N14 128.5 127.5
C8 C9 C10 106.1 104.9
C8 C9 H9 127.0 127.6
C8 N14 C15 131.8 119.9
C10 C9 H9 127.0 127.5
C9 C10 C11 127.9 125.6
C10 C11 C12 115.9 117.6
C10 C11 C13 131.2 117.5
C10 C11 H11 85.9 115.5
C12 C11 C13 61.2 60.0
C12 C11 H11 141.7 117.5
C11 C12 C13 57.9 60.0
C11 C12 H121 132.1 117.6
C11 C12 H122 137.1 117.5
C13 C11 H11 128.1 117.5
C11 C13 C12 60.8 60.0
C11 C13 H131 130.4 117.5
C11 C13 H132 135.5 117.6
C13 C12 H121 132.1 117.5
C13 C12 H122 137.1 117.5
C12 C13 H131 130.4 117.5
C12 C13 H132 135.5 117.5
H121 C12 H122 73.2 115.5
H131 C13 H132 75.4 115.6
N14 C15 C16 115.4 120.0
N14 C15 O17 123.7 120.0
C16 C15 O17 120.9 120.0
C15 C16 C18 111.3 109.5
C15 C16 C25 109.8 109.5
C15 C16 H16 109.1 109.5
C18 C16 C25 112.6 109.4
C18 C16 H16 106.1 109.5
C16 C18 C19 117.9 119.9
C16 C18 C23 122.5 120.0
C25 C16 H16 107.8 109.5
C16 C25 H251 109.5 109.4
C16 C25 H252 109.5 109.4
C16 C25 H253 109.4 109.5
C19 C18 C23 119.6 120.1
C18 C19 C20 120.1 120.1
C18 C19 H19 120.0 120.0
C18 C23 C22 120.1 120.1
C18 C23 H23 119.9 120.0
C20 C19 H19 119.9 119.9
C19 C20 C21 121.3 119.9
C19 C20 H20 119.3 120.0
C21 C20 H20 119.4 120.0
C20 C21 C22 117.6 119.9
C21 C22 C23 121.2 119.9
C21 C22 H22 119.4 120.1
C23 C22 H22 119.4 120.0
C22 C23 H23 120.0 119.9
H251 C25 H252 109.5 109.4
H251 C25 H253 109.5 109.5
H252 C25 H253 109.5 109.5

Torsion Angles for 529

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C5 N1 C2 C21 180.1 180.3
C2 N1 C5 N4 0.0 360.0
C2 N1 C5 O24 180.1 180.0
C2 N1 C21 C20 180.3 354.3
C2 N1 C21 C22 0.3 174.2
C3 C2 N1 H2 240.0 241.3
C3 C2 N1 H21 121.7 118.6
N1 C2 C3 N4 0.0 0.0
N1 C2 C3 H3 120.0 118.6
N1 C2 C3 H31 237.3 241.4
H2 C2 N1 H21 241.8 237.3
C2 N1 C5 C21 179.9 179.7
C5 N1 C2 C3 360.0 360.0
C5 N1 C2 H2 120.0 118.7
C5 N1 C2 H21 238.3 241.4
C5 N1 C21 C20 0.2 173.9
C5 N1 C21 C22 180.2 353.9
C3 N4 C5 N1 360.0 0.0
N1 C5 N4 H4 180.0 180.0
N4 C5 N1 O24 179.9 180.0
C2 N1 C21 C5 180.1 180.3
C21 N1 C2 C3 179.9 179.7
C21 N1 C2 H2 299.9 298.4
C21 N1 C2 H21 58.2 61.1
C21 N1 C5 N4 180.1 180.3
C21 N1 C5 O24 0.2 0.3
C19 C20 C21 N1 179.9 180.0
N1 C21 C20 H20 359.9 360.0
C20 C21 N1 C22 179.9 180.0
N1 C21 C22 C23 180.0 179.8
N1 C21 C22 H22 0.0 0.0
C3 C2 N1 C5 360.0 360.0
C3 C2 N1 C21 179.9 179.7
N1 C2 C3 H2 120.0 118.6
N1 C2 C3 H21 238.2 241.4
H2 C2 C3 H21 118.2 122.8
N4 C3 C2 H3 240.0 241.4
N4 C3 C2 H31 122.7 118.7
C2 C3 N4 C5 0.0 360.0
C2 C3 N4 H4 180.0 180.0
H3 C3 C2 H31 242.7 237.2
H2 C2 N1 C5 120.0 118.7
H2 C2 N1 C21 299.9 298.4
N1 C2 H2 C3 243.8 245.5
N1 C2 H2 H21 121.9 122.7
C3 C2 H2 H21 238.1 237.2
H2 C2 C3 N4 240.0 241.4
H2 C2 C3 H3 0.0 360.0
H2 C2 C3 H31 117.3 122.8
H21 C2 N1 C5 238.3 241.4
H21 C2 N1 C21 58.2 61.1
N1 C2 H21 C3 117.5 114.4
N1 C2 H21 H2 238.8 237.3
C3 C2 H21 H2 121.2 122.9
H21 C2 C3 N4 121.8 118.6
H21 C2 C3 H3 241.8 237.2
H21 C2 C3 H31 359.1 360.0
N1 C5 N4 C3 360.0 0.0
N4 C3 C2 H2 240.0 241.4
N4 C3 C2 H21 121.8 118.6
C2 C3 N4 H3 120.0 118.6
C2 C3 N4 H31 237.3 241.3
H3 C3 N4 H31 117.3 122.7
C5 N4 C3 H4 180.0 180.0
C3 N4 C5 O24 179.9 180.0
H3 C3 C2 H2 0.0 360.0
H3 C3 C2 H21 241.8 237.2
C2 C3 H3 N4 246.1 245.5
C2 C3 H3 H31 123.0 122.8
N4 C3 H3 H31 236.9 237.3
H3 C3 N4 C5 240.0 241.4
H3 C3 N4 H4 60.0 61.4
H31 C3 C2 H2 117.3 122.8
H31 C3 C2 H21 359.1 360.0
C2 C3 H31 N4 115.9 114.5
C2 C3 H31 H3 238.0 237.2
N4 C3 H31 H3 122.0 122.7
H31 C3 N4 C5 122.7 118.6
H31 C3 N4 H4 302.7 298.7
N4 C5 N1 C21 180.1 180.3
N1 C5 N4 O24 180.1 180.0
C5 N4 C3 H3 240.0 241.4
C5 N4 C3 H31 122.7 118.6
C3 N4 C5 H4 180.0 180.0
H4 N4 C3 H3 60.0 61.4
H4 N4 C3 H31 302.7 298.7
C3 N4 H4 C5 180.0 180.0
H4 N4 C5 O24 359.9 360.0
O24 C5 N1 C21 0.2 0.3
N1 C5 O24 N4 179.9 180.0
O24 C5 N4 H4 359.9 360.0
N7 N6 C10 C9 359.8 0.0
N7 N6 C10 C11 179.3 179.9
N6 N7 C8 C9 0.2 0.0
N6 N7 C8 N14 181.2 180.0
C10 N6 N7 C8 360.0 360.0
C8 C9 C10 N6 0.3 360.0
N6 C10 C9 H9 180.3 180.0
C9 C10 N6 C11 180.5 180.1
N6 C10 C11 C12 170.0 300.0
N6 C10 C11 C13 243.4 8.7
N6 C10 C11 H11 22.9 154.3
C8 N7 N6 C10 360.0 360.0
C9 C8 N7 N14 179.0 180.0
N7 C8 C9 C10 359.7 0.0
N7 C8 C9 H9 179.7 180.0
N7 C8 N14 C15 180.0 180.0
N6 C10 C9 C8 0.3 360.0
N7 C8 C9 N14 181.1 180.0
C9 C8 N14 C15 1.2 0.1
C10 C9 C8 H9 180.0 180.0
C8 C9 C10 C11 180.8 180.1
N7 C8 N14 C9 178.8 180.0
N14 C8 C9 C10 178.6 180.0
N14 C8 C9 H9 358.6 0.0
C8 N14 C15 C16 183.1 180.0
C8 N14 C15 O17 1.5 359.9
N6 C10 C9 C11 179.5 179.9
C10 C9 C8 N14 178.6 180.0
C8 C9 C10 H9 180.0 180.0
C9 C10 C11 C12 349.4 120.0
C9 C10 C11 C13 62.8 188.6
C9 C10 C11 H11 202.3 334.3
H9 C9 C8 N14 358.6 0.0
C8 C9 H9 C10 180.0 180.0
H9 C9 C10 C11 0.8 0.0
N6 C10 C11 C9 180.6 180.1
C11 C10 C9 H9 0.8 0.0
C12 C11 C10 C13 286.6 291.3
C12 C11 C10 H11 147.1 145.7
C10 C11 C12 C13 124.7 107.5
C10 C11 C12 H121 244.7 215.0
C10 C11 C12 H122 358.1 0.0
C13 C11 C10 H11 220.5 214.4
C10 C11 C13 C12 259.6 252.4
C10 C11 C13 H131 19.6 360.0
C10 C11 C13 H132 132.8 145.0
C10 C11 C12 H11 240.9 215.0
C13 C11 C12 H11 116.2 107.5
C12 C11 C13 C12 -0.0 -0.0
C12 C11 C13 H131 120.0 107.5
C12 C11 C13 H132 233.3 252.6
C13 C12 C11 H121 240.0 252.5
C13 C12 C11 H122 126.5 107.5
C11 C12 C13 H131 240.0 252.6
C11 C12 C13 H132 126.7 107.6
H121 C12 C11 H122 246.5 215.0
C10 C11 C13 H11 124.6 145.0
C12 C11 C13 H11 225.0 252.5
C13 C11 C12 C13 360.0 -0.0
C13 C11 C12 H121 120.0 107.5
C13 C11 C12 H122 233.5 252.5
C11 C13 C12 H121 240.0 252.5
C11 C13 C12 H122 126.5 107.5
C12 C13 C11 H131 240.0 252.5
C12 C13 C11 H132 126.7 107.4
H131 C13 C11 H132 246.7 215.0
C10 C11 H11 C12 128.0 145.7
C10 C11 H11 C13 218.4 214.3
C12 C11 H11 C13 90.4 68.6
H11 C11 C12 C13 243.8 252.5
H11 C11 C12 H121 3.8 0.0
H11 C11 C12 H122 117.2 145.1
H11 C11 C13 C12 135.0 107.5
H11 C11 C13 H131 255.0 215.0
H11 C11 C13 H132 8.2 0.0
C13 C12 C11 C13 360.0 -0.0
C13 C12 C11 H11 243.8 252.5
C11 C12 C13 H121 120.0 107.5
C11 C12 C13 H122 233.5 252.5
C12 C13 C11 H11 135.0 107.5
C11 C13 C12 H131 120.0 107.4
C11 C13 C12 H132 233.3 252.4
H121 C12 C13 H122 113.5 145.0
H131 C13 C12 H132 113.2 145.0
H121 C12 C11 C13 120.0 107.5
H121 C12 C11 H11 3.8 0.0
C11 C12 H121 C13 278.5 291.3
C11 C12 H121 H122 139.3 145.7
C13 C12 H121 H122 220.7 214.3
H121 C12 C13 H131 120.0 145.0
H121 C12 C13 H132 6.8 0.0
H122 C12 C11 C13 233.5 252.5
H122 C12 C11 H11 117.2 145.1
C11 C12 H122 C13 90.6 68.6
C11 C12 H122 H121 225.3 214.3
C13 C12 H122 H121 134.7 145.7
H122 C12 C13 H131 6.5 0.0
H122 C12 C13 H132 253.3 215.0
H131 C13 C11 H11 255.0 215.0
C11 C13 H131 C12 276.6 291.4
C11 C13 H131 H132 138.3 145.7
H131 C13 C12 H121 120.0 145.0
H131 C13 C12 H122 6.5 0.0
C12 C13 H131 H132 221.7 214.3
H132 C13 C11 H11 8.2 0.0
C11 C13 H132 C12 92.6 68.6
C11 C13 H132 H131 226.3 214.3
H132 C13 C12 H121 6.8 0.0
H132 C13 C12 H122 253.3 215.0
C12 C13 H132 H131 133.7 145.7
C16 C15 N14 O17 181.6 180.0
N14 C15 C16 C18 250.6 180.0
N14 C15 C16 C25 125.3 60.0
N14 C15 C16 H16 7.4 300.0
N14 C15 C16 O17 178.4 180.0
C18 C16 C15 C25 125.3 119.9
C18 C16 C15 H16 243.2 240.0
C15 C16 C18 C19 94.3 120.0
C15 C16 C18 C23 274.4 299.8
C25 C16 C15 H16 117.9 120.0
C15 C16 C25 H251 69.3 180.0
C15 C16 C25 H252 189.3 299.9
C15 C16 C25 H253 309.3 60.0
N14 C15 O17 C16 181.7 180.0
O17 C15 C16 C18 72.2 0.0
O17 C15 C16 C25 306.9 240.1
O17 C15 C16 H16 189.0 120.0
C18 C16 C15 O17 72.2 0.0
C15 C16 C18 C25 236.3 240.0
C15 C16 C18 H16 118.6 120.0
C25 C16 C18 H16 242.3 240.0
C18 C16 C25 H251 304.7 60.1
C18 C16 C25 H252 64.7 180.0
C18 C16 C25 H253 184.7 300.0
C19 C18 C16 C23 180.0 180.2
C16 C18 C19 C20 180.1 180.0
C16 C18 C19 H19 0.0 0.1
C16 C18 C23 C22 179.8 179.7
C16 C18 C23 H23 359.9 359.9
C25 C16 C15 O17 306.9 240.1
C15 C16 C25 C18 124.6 120.0
C15 C16 C25 H16 241.3 240.0
C18 C16 C25 H16 116.7 120.0
C25 C16 C18 C19 218.1 239.9
C25 C16 C18 C23 38.1 59.7
H251 C25 C16 H252 240.0 240.1
H251 C25 C16 H253 120.0 120.1
H252 C25 C16 H253 240.0 240.0
H16 C16 C15 O17 189.0 120.0
C15 C16 H16 C18 240.0 240.0
C15 C16 H16 C25 119.2 120.0
C18 C16 H16 C25 239.2 240.0
H16 C16 C18 C19 335.7 359.9
H16 C16 C18 C23 155.8 179.8
H16 C16 C25 H251 188.0 300.1
H16 C16 C25 H252 308.0 60.0
H16 C16 C25 H253 68.0 180.0
C19 C18 C16 C25 218.1 239.9
C19 C18 C16 H16 335.7 359.9
C16 C18 C19 C23 180.0 179.8
C19 C18 C23 C22 359.9 359.6
C19 C18 C23 H23 179.9 179.7
C20 C19 C18 H19 180.0 179.9
C18 C19 C20 C21 0.1 0.0
C18 C19 C20 H20 180.1 180.0
C23 C18 C16 C25 38.1 59.7
C23 C18 C16 H16 155.8 179.8
C16 C18 C23 C19 180.0 180.2
C23 C18 C19 C20 0.0 0.2
C23 C18 C19 H19 180.0 180.2
C21 C22 C23 C18 0.1 0.5
C18 C23 C22 H22 180.1 180.2
C22 C23 C18 H23 180.0 179.8
N1 C21 C20 C19 179.9 180.0
C20 C19 C18 C23 0.0 0.2
C18 C19 C20 H19 180.0 180.1
C21 C20 C19 H20 180.0 180.0
C19 C20 C21 C22 359.8 360.0
H19 C19 C18 C23 180.0 180.2
C18 C19 H19 C20 180.0 179.9
H19 C19 C20 C21 180.1 180.0
H19 C19 C20 H20 0.1 359.9
N1 C21 C20 C22 180.1 180.0
C21 C20 C19 H19 180.1 180.0
C19 C20 C21 H20 180.0 180.0
C20 C21 C22 C23 0.1 359.7
C20 C21 C22 H22 180.1 180.0
H20 C20 C19 H19 0.1 359.9
C19 C20 H20 C21 180.0 180.0
H20 C20 C21 C22 179.8 180.0
N1 C21 C22 C20 179.9 180.0
C18 C23 C22 C21 0.1 0.5
C22 C21 C20 H20 179.8 180.0
C23 C22 C21 H22 180.0 179.8
C21 C22 C23 H23 180.0 180.3
C18 C23 C22 H23 180.0 180.2
C21 C22 C23 H22 180.0 180.2
C21 C22 H22 C23 180.0 179.8
H22 C22 C23 H23 0.0 0.1
C18 C23 H23 C22 180.0 179.8
H23 C23 C22 H22 0.0 0.1
H251 C25 C16 H16 188.0 300.1
C16 C25 H251 H252 120.0 119.9
C16 C25 H251 H253 240.0 240.0
H252 C25 H251 H253 120.0 120.1
H252 C25 C16 H16 308.0 60.0
C16 C25 H252 H251 240.0 240.1
C16 C25 H252 H253 120.0 120.0
H251 C25 H252 H253 240.0 239.9
H253 C25 C16 H16 68.0 180.0
C16 C25 H253 H251 120.0 120.0
C16 C25 H253 H252 240.0 240.0
H251 C25 H253 H252 120.0 120.0